Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0945
         (575 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_07_0091 - 12774590-12774664,12774971-12775134,12775249-127753...    28   6.1  

>10_07_0091 - 12774590-12774664,12774971-12775134,12775249-12775382,
            12775463-12775556,12775650-12775758,12776055-12776103,
            12778336-12778376,12779539-12779571,12779665-12779754,
            12780474-12780507,12781218-12781510,12781859-12782057,
            12782129-12782289,12783130-12783282,12783545-12783715,
            12783822-12783921,12784023-12784111,12784192-12784290,
            12784406-12784676,12784764-12784961,12785041-12785140,
            12785799-12785931,12786016-12786277,12787106-12787155
          Length = 1033

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = +1

Query: 373  P*VTPYIISYLSVKVPSKSAQPFQRLAGTNRQT--KIVKMLFWCMYRIYIHIH 525
            P    Y++ ++ V++  +S  P Q+L     Q   ++VK +F  ++R+Y HI+
Sbjct: 930  PKYVEYLMDWIEVQLDDESIFP-QKLGTPFPQNFREVVKTIFKRLFRVYAHIY 981


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,884,586
Number of Sequences: 37544
Number of extensions: 257832
Number of successful extensions: 500
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)