Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0942
         (655 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468...    39   0.004
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86...    33   0.20 
08_01_0417 - 3692247-3692329,3692442-3692504,3693233-3693350,369...    33   0.26 
03_05_0107 - 20883353-20883627,20883739-20883801,20884608-208847...    32   0.46 
03_05_0976 - 29341981-29342229,29342388-29342621,29342771-293430...    29   3.2  

>04_04_1623 -
           34846056-34846223,34846547-34846644,34846738-34846829,
           34847096-34847202,34847385-34847490,34848108-34848547
          Length = 336

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = -1

Query: 655 LDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 554
           L LK +AK++AWHKL     E+A + YI +V+ L
Sbjct: 139 LKLKARAKWNAWHKLGAMPTEEAMQKYITVVDEL 172


>06_01_0108 -
           860080-860162,860276-860338,860857-860974,861481-861492
          Length = 91

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = -1

Query: 652 DLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLI 551
           +LK + K+DAW  + G SKE+A   YI  V+ L+
Sbjct: 50  NLKDRYKWDAWKAVEGKSKEEAMADYITKVKQLL 83


>08_01_0417 -
           3692247-3692329,3692442-3692504,3693233-3693350,
           3694084-3694095
          Length = 91

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -1

Query: 646 KGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLI 551
           + +AK+DAW  + G SKE+A   YI  V+ L+
Sbjct: 52  RDRAKWDAWKAVEGKSKEEAMSDYITKVKQLL 83


>03_05_0107 -
           20883353-20883627,20883739-20883801,20884608-20884725,
           20885012-20885023
          Length = 155

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 646 KGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 554
           + +AK+DAW  + G SKE+A   YI  V+ L
Sbjct: 52  RDRAKWDAWKAVEGKSKEEAMSDYITKVKQL 82


>03_05_0976 -
           29341981-29342229,29342388-29342621,29342771-29343046,
           29343181-29343457,29343549-29343847,29344021-29344152,
           29344451-29344660,29344812-29344875,29346114-29346260,
           29346477-29346760
          Length = 723

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 259 RKGRKLFHCCSILCFSTLEVPFINV 333
           R GRK   CC IL F+   V F+NV
Sbjct: 418 RSGRKKSACCKILFFTIWNVFFVNV 442


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,044,604
Number of Sequences: 37544
Number of extensions: 199640
Number of successful extensions: 379
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 379
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)