Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0942
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme...    52   3e-07
Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical pr...    40   0.002
U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical pr...    34   0.077
Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical pr...    32   0.31 
Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical pr...    29   2.2  

>AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 1 protein.
          Length = 86

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 23/38 (60%), Positives = 29/38 (76%)
 Frame = -1

Query: 652 DLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIASIG 539
           DLKGKAK+ AW +  G +K+DAQKAY+ +VE LIA  G
Sbjct: 48  DLKGKAKWSAWDEKKGLAKDDAQKAYVALVEELIAKYG 85


>Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical
           protein R06F6.9 protein.
          Length = 385

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 15/36 (41%), Positives = 27/36 (75%)
 Frame = -1

Query: 655 LDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIA 548
           +D  G+AK+DAW+ L G ++++A+  Y ++V GLI+
Sbjct: 71  MDFVGRAKYDAWNTLKGQTQDEARANYAKLVGGLIS 106


>U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical
           protein F26A1.15 protein.
          Length = 219

 Score = 34.3 bits (75), Expect = 0.077
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -1

Query: 649 LKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 554
           + G  K+ AW+K  G +KE+A + Y+E V+ L
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKL 188


>Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical
           protein C18D11.2 protein.
          Length = 266

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 15/44 (34%), Positives = 29/44 (65%)
 Frame = -1

Query: 652 DLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIASIGLKE*KT 521
           D++G  K++AW+KL   + ++A++AY++ +   I  +  KE KT
Sbjct: 51  DIQGVYKWNAWNKLDNMTMDEAKQAYVDSIVQKIREV-QKEYKT 93


>Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical
           protein F47B10.7 protein.
          Length = 116

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = -1

Query: 640 KAKFDAWHKLAGTSKEDAQKAYIEIVEGLIASI 542
           + K+D+W +L G S+++A++ YI+ +  +   I
Sbjct: 58  RKKWDSWKELEGVSQDEAKERYIKALNDMFDKI 90


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,783,473
Number of Sequences: 27780
Number of extensions: 199305
Number of successful extensions: 409
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)