Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0940
         (388 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical pr...    82   2e-16
AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    28   2.6  
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    27   3.5  
Z81072-3|CAB03022.1|  486|Caenorhabditis elegans Hypothetical pr...    27   4.6  
Z81056-5|CAB02905.2|  307|Caenorhabditis elegans Hypothetical pr...    27   4.6  
U22831-9|AAN63388.1|  412|Caenorhabditis elegans Hypothetical pr...    27   4.6  
U22831-8|AAK20070.2|  545|Caenorhabditis elegans Hypothetical pr...    27   4.6  
Z66560-3|CAA91451.2|  265|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr...    26   8.1  
Z69883-3|CAA93741.2|  450|Caenorhabditis elegans Hypothetical pr...    26   8.1  
AC006698-1|AAF39993.3|  398|Caenorhabditis elegans Hypothetical ...    26   8.1  

>Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical
           protein C34C6.4 protein.
          Length = 599

 Score = 81.8 bits (193), Expect = 2e-16
 Identities = 48/137 (35%), Positives = 78/137 (56%), Gaps = 14/137 (10%)
 Frame = +2

Query: 20  HEAYTEIGVKN----LSDVNGVNQMGVTRAQTTIHNGIRISTARAFLSPITNRKNLHVIK 187
           H+A+  +G ++     +D+NG  Q G++    TIHNG R S ++A++ PI NR NL    
Sbjct: 194 HKAWLNVGKEHPLGWTNDMNGEKQEGISTMDMTIHNGERWSASKAYVHPIRNRPNLITSS 253

Query: 188 NTLATKILFEKN----------TNIVSGISIHSDGKDITVNIKKELIVSGGSINSPQLLM 337
               T++LF+ N           N V   SI S  ++  +  + ++I++GG+IN+PQLLM
Sbjct: 254 GITCTRVLFDTNKAIGIEFIRKLNFVGTDSIDSYSRE-KIYCQGDVILAGGAINTPQLLM 312

Query: 338 LSGIGPKSDLKNLGIDV 388
           LSG+GP   L++  I +
Sbjct: 313 LSGVGPADHLRSHEIPI 329


>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
           protein D1007.7 protein.
          Length = 988

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 16/65 (24%), Positives = 28/65 (43%)
 Frame = +2

Query: 35  EIGVKNLSDVNGVNQMGVTRAQTTIHNGIRISTARAFLSPITNRKNLHVIKNTLATKILF 214
           ++G+ NLS +N    M V  AQ  +    R +  +A       ++NL ++ N L      
Sbjct: 381 QLGLPNLSGLNQAQLMNVQNAQNMLQLQQRAAQLQALQGNPNAQRNLLMLGNPLLNPFAL 440

Query: 215 EKNTN 229
           +   N
Sbjct: 441 QHGVN 445


>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
           protein F39C12.1 protein.
          Length = 5105

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = -2

Query: 306 PDTINSFFMFTVISFPSLCIEIPLTILVFFSNNILVASVFLMTCKFFLFVIGLKKARAVL 127
           P   N+ F    +   +LC   PL I  +  +N+L+  V        ++ IGL+K  ++L
Sbjct: 196 PKAFNAVFFDGGVQKTALCSTRPLEIACWNGSNVLLYDVRRPEVPCAIYDIGLEKNESIL 255


>Z81072-3|CAB03022.1|  486|Caenorhabditis elegans Hypothetical
           protein F30A10.4 protein.
          Length = 486

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 301 IGWVYKFTAAFNVVRDWTEK*FKKFRNRR 387
           +G+ Y FT+ +    DWT    K F+N +
Sbjct: 273 MGFDYGFTSRYRTFEDWTPAGMKLFKNEQ 301


>Z81056-5|CAB02905.2|  307|Caenorhabditis elegans Hypothetical
           protein F09F3.7 protein.
          Length = 307

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -2

Query: 285 FMFTVISFPSLCIEIPLTILVFFSNNILVASVFLMTCKFFLFVIG 151
           F+FT +SF S+ +    T++ F SN  LV S  + + K  + V G
Sbjct: 249 FVFTSVSFSSVYMLDGATMVYFHSNFKLVCSCKIASTKNVVMVSG 293


>U22831-9|AAN63388.1|  412|Caenorhabditis elegans Hypothetical
           protein F47D12.9b protein.
          Length = 412

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = +2

Query: 14  NRHEAYTEIGVKNLSDVNGVNQMGVTRAQTTIHNGIRISTARAFLSPITNRKNLHVIKNT 193
           +R EAY  + +++ S+  G N +G+T       +G   S   ++L     R N  ++  T
Sbjct: 83  SRREAYQLLPIRSRSNNAGFNTLGLTVRPMLRDDG--FSDEPSYLDYAVTRYNSFIVDQT 140

Query: 194 LA 199
           LA
Sbjct: 141 LA 142


>U22831-8|AAK20070.2|  545|Caenorhabditis elegans Hypothetical
           protein F47D12.9a protein.
          Length = 545

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = +2

Query: 14  NRHEAYTEIGVKNLSDVNGVNQMGVTRAQTTIHNGIRISTARAFLSPITNRKNLHVIKNT 193
           +R EAY  + +++ S+  G N +G+T       +G   S   ++L     R N  ++  T
Sbjct: 216 SRREAYQLLPIRSRSNNAGFNTLGLTVRPMLRDDG--FSDEPSYLDYAVTRYNSFIVDQT 273

Query: 194 LA 199
           LA
Sbjct: 274 LA 275


>Z66560-3|CAA91451.2|  265|Caenorhabditis elegans Hypothetical
           protein D1053.3 protein.
          Length = 265

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
 Frame = +2

Query: 68  GVNQMGVTRAQTTI--HNGIRISTARAFLS---PITNRKNLHVI 184
           G  +M +T A   I  ++ + I + +A  S   P+ NRKNLH++
Sbjct: 70  GNREMALTAADYAILYYSALNIDSLQALQSLVQPLQNRKNLHIL 113


>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical
           protein C03D6.4 protein.
          Length = 1390

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 24/114 (21%), Positives = 50/114 (43%)
 Frame = +2

Query: 14  NRHEAYTEIGVKNLSDVNGVNQMGVTRAQTTIHNGIRISTARAFLSPITNRKNLHVIKNT 193
           ++ + Y++  +   + V   +Q+GVT   T   N +     ++ L     R+N++V    
Sbjct: 29  SKSDGYSQNEINIRNRVATSSQLGVTFV-TVNSNQLSCFHTKSLLGYKITRENMNVEVTD 87

Query: 194 LATKILFEKNTNIVSGISIHSDGKDITVNIKKELIVSGGSINSPQLLMLSGIGP 355
           L  K +      +++ + ++SDG  + V   K   VS    +  ++   S I P
Sbjct: 88  LPIKTIRLHGVVLINDMGVNSDGTVLGVLHTKNNDVSVDVFDIKKICTSSSIEP 141


>Z69883-3|CAA93741.2|  450|Caenorhabditis elegans Hypothetical
           protein C27C12.4 protein.
          Length = 450

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 10/52 (19%), Positives = 24/52 (46%)
 Frame = -2

Query: 303 DTINSFFMFTVISFPSLCIEIPLTILVFFSNNILVASVFLMTCKFFLFVIGL 148
           D +N+F +F      + C+    +  +F  + +L+ ++  +   FF   + L
Sbjct: 384 DPVNAFAIFKFFQSMAACVSFFYSSFLFLPSQLLILTIGCVASTFFFLKVRL 435


>AC006698-1|AAF39993.3|  398|Caenorhabditis elegans Hypothetical
           protein W10C4.1 protein.
          Length = 398

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
 Frame = -2

Query: 285 FMFTVISFPSLC----IEIPLTILVFFSNNILVASVFLMTC 175
           F++TV+ FP +C    +   LTILV  +N+ +  +   +TC
Sbjct: 23  FLYTVL-FPPICLFGVVGNALTILVLVNNDFMSRANIFLTC 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,752,918
Number of Sequences: 27780
Number of extensions: 171062
Number of successful extensions: 564
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)