BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0940
(388 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 104 3e-25
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 3.7
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 3.7
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 4.9
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 21 4.9
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 21 4.9
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 6.5
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 6.5
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 6.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 6.5
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 6.5
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 20 8.6
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 104 bits (250), Expect = 3e-25
Identities = 54/122 (44%), Positives = 78/122 (63%)
Frame = +2
Query: 23 EAYTEIGVKNLSDVNGVNQMGVTRAQTTIHNGIRISTARAFLSPITNRKNLHVIKNTLAT 202
+A E G D++G G T AQT NG+R+S+ARAF++P NR NLHVI N T
Sbjct: 229 KAAEEAGFGVSEDLSGDRINGFTVAQTISRNGVRLSSARAFITPFENRSNLHVIVNATVT 288
Query: 203 KILFEKNTNIVSGISIHSDGKDITVNIKKELIVSGGSINSPQLLMLSGIGPKSDLKNLGI 382
K+ +G+++ +G+ + ++E+I+S GS+N+PQLLMLSGIGPK L++LGI
Sbjct: 289 KV--RTLNKRATGVNVLINGRRRIIFARREVILSAGSVNTPQLLMLSGIGPKEHLRSLGI 346
Query: 383 DV 388
V
Sbjct: 347 PV 348
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.4 bits (43), Expect = 3.7
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +1
Query: 259 WKRYNSEHKKGVNSIGWVYKFTAAFNVV 342
W +NS GV+ W Y AA + +
Sbjct: 235 WLAFNSGSTYGVSGQRWQYAARAAISTM 262
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 3.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 142 SPCGTNSNAIMNCSLRSCYSH 80
+P TNSN+I + S S YSH
Sbjct: 215 APRLTNSNSIKHESDNSDYSH 235
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.0 bits (42), Expect = 4.9
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 284 LCSLLYLFHHC 252
LC+ L+ +HHC
Sbjct: 466 LCNTLHHWHHC 476
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 21.0 bits (42), Expect = 4.9
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = +2
Query: 20 HEAYTEIGVKNLSDVNGVNQMGV 88
H Y G+K +++ NGV ++ +
Sbjct: 107 HHCYDADGIKLMNEENGVMEIKI 129
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 21.0 bits (42), Expect = 4.9
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = +2
Query: 20 HEAYTEIGVKNLSDVNGVNQMGV 88
H Y G+K +++ NGV ++ +
Sbjct: 107 HHCYDADGIKLMNEENGVMEIKI 129
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 20.6 bits (41), Expect = 6.5
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -3
Query: 164 YLLLGLKKPVRY 129
Y + GLK+P+R+
Sbjct: 150 YTISGLKRPIRF 161
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 20.6 bits (41), Expect = 6.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 146 LSPITNRKNLHVIKNTLATKIL 211
LSP+T + H++ N+ A IL
Sbjct: 11 LSPLTLNRITHILANSPAIIIL 32
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 20.6 bits (41), Expect = 6.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 146 LSPITNRKNLHVIKNTLATKIL 211
LSP+T + H++ N+ A IL
Sbjct: 49 LSPLTLNRITHILANSPAIIIL 70
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.6 bits (41), Expect = 6.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 241 NFNTQ*WKRYNSEHKKGVN 297
+FN Q W+R S H+ V+
Sbjct: 82 SFNAQSWQRLTSLHELHVH 100
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 20.6 bits (41), Expect = 6.5
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 182 IKNTLATKILFEKNTNIVSGISIHSDGKDITV 277
I+NTL + + + N+ +G+ I +D IT+
Sbjct: 36 IRNTLISNGDYIEENNMPNGMQIWNDKVFITI 67
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 20.2 bits (40), Expect = 8.6
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -2
Query: 300 TINSFFMFTVISFPSLCIEIP 238
TI FF+ T + ++ +E+P
Sbjct: 5 TIIRFFVLTTMLMMAIAVELP 25
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,106
Number of Sequences: 438
Number of extensions: 2088
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9391092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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