Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0939
         (445 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54MW5 Cluster: Putative uncharacterized protein; n=1; ...    36   0.39 
UniRef50_Q5YL07 Cluster: Sensor protein; n=3; Aeromonas hydrophi...    35   0.91 

>UniRef50_Q54MW5 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 623

 Score = 35.9 bits (79), Expect = 0.39
 Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = -2

Query: 132 IRSSNNCYNFIFRLFYNISFIILCPLMPNK-LLLNY 28
           IR SNN ++ +F +F  I F++  PL PN  +LLNY
Sbjct: 2   IRKSNN-FSILFAIFLKIVFVVSAPLCPNSTILLNY 36


>UniRef50_Q5YL07 Cluster: Sensor protein; n=3; Aeromonas
           hydrophila|Rep: Sensor protein - Aeromonas hydrophila
          Length = 1252

 Score = 34.7 bits (76), Expect = 0.91
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -2

Query: 339 YMQFLSNL--NWQRFTSQAESMIDSQQKSAEQWCH*YLIAR 223
           Y Q LSNL  N  ++T Q    ++ Q K+++ WC  YL+ R
Sbjct: 821 YKQILSNLVSNAIKYTEQGSVQVELQSKTSDGWCTLYLVIR 861


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 351,613,637
Number of Sequences: 1657284
Number of extensions: 6184921
Number of successful extensions: 11567
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11566
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)