Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0939
         (445 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50300-7|AAC48106.1|  645|Caenorhabditis elegans Hypothetical pr...    27   4.6  
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr...    27   4.6  

>U50300-7|AAC48106.1|  645|Caenorhabditis elegans Hypothetical
           protein R03H4.5 protein.
          Length = 645

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 7/23 (30%), Positives = 17/23 (73%)
 Frame = +1

Query: 163 HMYCIISVFVFLLVMEHIVSPRY 231
           +++CI+S+F+  +V+ H+   +Y
Sbjct: 315 YLFCILSIFIASIVLHHLFEKQY 337


>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical protein
            M03A8.2 protein.
          Length = 2275

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
 Frame = +1

Query: 328  KLHVSLKKYLSILYGRRISD-----PLNQVMKSGMIYDSNLQML 444
            KLH+  K +L ILY R ++D     P     ++    +SN+Q L
Sbjct: 900  KLHIPEKNFLEILYNRLVNDLALFQPAAPAFRNNQSTNSNVQPL 943


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,371,868
Number of Sequences: 27780
Number of extensions: 154797
Number of successful extensions: 336
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 336
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)