Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0936
(604 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 229 4e-59
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 221 8e-57
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 204 9e-52
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 193 2e-48
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 193 2e-48
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 188 9e-47
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 186 5e-46
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 184 1e-45
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 184 1e-45
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 181 1e-44
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 173 2e-42
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 169 3e-41
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 169 3e-41
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 168 1e-40
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 162 5e-39
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 153 3e-36
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 153 3e-36
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 152 7e-36
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 151 1e-35
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 149 5e-35
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 147 2e-34
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 138 1e-31
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 137 2e-31
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 137 2e-31
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 137 2e-31
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 137 2e-31
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 135 9e-31
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 133 4e-30
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 130 3e-29
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 127 2e-28
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 120 3e-26
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 117 2e-25
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 110 3e-23
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 109 7e-23
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 107 3e-22
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 106 5e-22
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 97 2e-19
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 84 3e-15
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 83 5e-15
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 80 3e-14
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 78 2e-13
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 77 4e-13
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 77 4e-13
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 76 6e-13
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 76 7e-13
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 75 1e-12
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 75 1e-12
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 73 4e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 71 2e-11
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 71 3e-11
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 69 6e-11
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 69 6e-11
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 69 9e-11
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 69 9e-11
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 69 1e-10
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 68 1e-10
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 67 3e-10
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 66 5e-10
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 66 8e-10
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 64 2e-09
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 63 4e-09
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 62 7e-09
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 62 1e-08
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 61 2e-08
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 59 7e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 7e-08
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 59 7e-08
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 57 3e-07
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 56 6e-07
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 53 6e-06
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 53 6e-06
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 52 8e-06
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 52 1e-05
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 51 2e-05
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 49 7e-05
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 49 1e-04
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 48 1e-04
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 48 1e-04
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 48 1e-04
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 48 1e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 47 3e-04
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 46 7e-04
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 46 7e-04
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 45 0.001
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 44 0.003
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 44 0.004
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 43 0.006
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 43 0.006
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 42 0.008
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 40 0.034
UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=... 40 0.034
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 40 0.060
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 38 0.14
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 36 0.74
UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3 pre... 36 0.97
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 35 1.3
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 34 2.3
UniRef50_A5H2T8 Cluster: Cytochrome c oxidase subunit 1; n=1; Pi... 34 2.3
UniRef50_P03875 Cluster: Putative COX1/OXI3 intron 1 protein; n=... 33 3.9
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 33 6.9
UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|R... 33 6.9
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 6.9
UniRef50_Q8ID15 Cluster: Putative uncharacterized protein MAL13P... 32 9.1
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 229 bits (560), Expect = 4e-59
Identities = 123/199 (61%), Positives = 132/199 (66%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 187
+G++GTSL LLIRAELG PGSLIGDDQIYNTIVTAHA N LVPL
Sbjct: 23 AGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPL 82
Query: 188 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 367
+LGAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDL
Sbjct: 83 MLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDL 142
Query: 368 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 547
AIFSLHLAGISS SFDQ+PLFV AVGITAF AGA
Sbjct: 143 AIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGA 202
Query: 548 ITILLTDRNLNTSFFDPAG 604
IT+LLTDRNLNTSFFDPAG
Sbjct: 203 ITMLLTDRNLNTSFFDPAG 221
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 221 bits (541), Expect = 8e-57
Identities = 118/197 (59%), Positives = 128/197 (64%)
Frame = +2
Query: 14 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 193
++GTSL LLIR ELG PGSLIGDDQIYNTIVTAHA N L+PL+L
Sbjct: 1 MVGTSLSLLIRTELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLML 60
Query: 194 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 373
GAPD+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAI
Sbjct: 61 GAPDMAFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAI 120
Query: 374 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 553
FSLHLAGISS SFDQ+PLF+ AVGITA AGAIT
Sbjct: 121 FSLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAIT 180
Query: 554 ILLTDRNLNTSFFDPAG 604
+LLTDRNLNTSFFDPAG
Sbjct: 181 MLLTDRNLNTSFFDPAG 197
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 204 bits (499), Expect = 9e-52
Identities = 113/198 (57%), Positives = 131/198 (66%)
Frame = -2
Query: 603 PAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFNRXXXXXXX 424
PAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I +R
Sbjct: 11 PAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVM 70
Query: 423 XXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGR 244
I+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG
Sbjct: 71 KFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGS 130
Query: 243 SQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SSPINDP 64
+QNL+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S PI P
Sbjct: 131 NQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSFPIKLP 189
Query: 63 GFPNSARIKSLKDVPIIP 10
G PNSARIKSL DVP +P
Sbjct: 190 GCPNSARIKSLSDVPTMP 207
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 193 bits (471), Expect = 2e-48
Identities = 107/199 (53%), Positives = 122/199 (61%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 187
+G+IGT+L LLIRAELG PG+L+GDDQIYN IVTAHA N LVPL
Sbjct: 27 AGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPL 86
Query: 188 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 367
++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL
Sbjct: 87 MIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDL 146
Query: 368 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 547
AIFSLHLAGISS S Q PLFV +V ITA A
Sbjct: 147 AIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAG 206
Query: 548 ITILLTDRNLNTSFFDPAG 604
IT+LLTDRNLNT+FFDPAG
Sbjct: 207 ITMLLTDRNLNTTFFDPAG 225
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 193 bits (471), Expect = 2e-48
Identities = 104/199 (52%), Positives = 119/199 (59%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 187
SG+IGT+L LLIR ELG PGS IG+DQ+YN +VTAHA N LVPL
Sbjct: 9 SGLIGTALSLLIRVELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPL 68
Query: 188 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 367
+LGAPD+AFPR+NN+ F VE+GAGTG TVYPPLS N AH G SVDL
Sbjct: 69 MLGAPDMAFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDL 128
Query: 368 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 547
AIFSLHLAG+SS + + LFV +V ITA AGA
Sbjct: 129 AIFSLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGA 188
Query: 548 ITILLTDRNLNTSFFDPAG 604
IT+LLTDRN NTSFFDPAG
Sbjct: 189 ITMLLTDRNFNTSFFDPAG 207
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 188 bits (458), Expect = 9e-47
Identities = 102/199 (51%), Positives = 119/199 (59%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 187
+G++GT+L LLIRAEL PG+L+GDDQIYN IVTAHA N LVPL
Sbjct: 26 AGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPL 85
Query: 188 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 367
++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL
Sbjct: 86 MIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDL 145
Query: 368 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 547
IFSLHLAG+SS S Q PLFV AV +TA A
Sbjct: 146 TIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSLPVLAAG 205
Query: 548 ITILLTDRNLNTSFFDPAG 604
IT+LLTDRNLNT+FFDPAG
Sbjct: 206 ITMLLTDRNLNTTFFDPAG 224
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 186 bits (452), Expect = 5e-46
Identities = 100/199 (50%), Positives = 119/199 (59%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 187
+G++GT+L LLIRAEL PG+L+GDDQIYN IVTAHA N LVPL
Sbjct: 26 AGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPL 85
Query: 188 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 367
++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL
Sbjct: 86 MIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDL 145
Query: 368 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 547
IFSLHLAG+SS + Q PLFV +V +TA A
Sbjct: 146 TIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSLPVLAAG 205
Query: 548 ITILLTDRNLNTSFFDPAG 604
IT+LLTDRNLNT+FFDPAG
Sbjct: 206 ITMLLTDRNLNTTFFDPAG 224
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 184 bits (448), Expect = 1e-45
Identities = 100/197 (50%), Positives = 117/197 (59%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 187
+G++GT+L LLIRAEL PG+L+GDDQIYN IVTAHA N L+PL
Sbjct: 15 AGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPL 74
Query: 188 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 367
++GAPD+AFPR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL
Sbjct: 75 MIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDL 134
Query: 368 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 547
IFSLHLAGISS S Q PLFV AV ITA A
Sbjct: 135 TIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLLSLPVLAAG 194
Query: 548 ITILLTDRNLNTSFFDP 598
IT+LLTDRNLNT+FFDP
Sbjct: 195 ITMLLTDRNLNTTFFDP 211
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 184 bits (448), Expect = 1e-45
Identities = 99/199 (49%), Positives = 119/199 (59%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 187
+G++GT+L LLIRAELG PG+L+G+D IYN IVTAHA N LVPL
Sbjct: 26 AGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPL 85
Query: 188 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 367
++GAPD+AFPR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL
Sbjct: 86 MIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDL 145
Query: 368 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 547
IFSLHLAG+SS + Q PLFV +V ITA A
Sbjct: 146 TIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAG 205
Query: 548 ITILLTDRNLNTSFFDPAG 604
IT+LLTDRNLNT+FFDPAG
Sbjct: 206 ITMLLTDRNLNTTFFDPAG 224
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 181 bits (441), Expect = 1e-44
Identities = 97/199 (48%), Positives = 117/199 (58%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 187
SG IGT+ +LIR EL +PGS++GDD +YN IVTAHA N VPL
Sbjct: 27 SGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPL 86
Query: 188 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 367
++GAPD+AFPR+NNI F +VE GAGTG TVYPPL+S AH G SVD+
Sbjct: 87 MIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDM 146
Query: 368 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 547
AIFSLHLAG+SS + ++PLFV +V ITA AGA
Sbjct: 147 AIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLPVLAGA 206
Query: 548 ITILLTDRNLNTSFFDPAG 604
IT+LLTDR NT+FFDPAG
Sbjct: 207 ITMLLTDRYFNTTFFDPAG 225
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 173 bits (422), Expect = 2e-42
Identities = 93/199 (46%), Positives = 116/199 (58%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 187
SG++G S+ L+IR ELG PGSLIG+DQIYN+IVT+HA N L+PL
Sbjct: 10 SGMLGFSMSLIIRLELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPL 69
Query: 188 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 367
+LG+PD++FPR+NN+ F + G GTG TVYPPLS + H G SVDL
Sbjct: 70 MLGSPDMSFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDL 129
Query: 368 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 547
IFSLHLAG SS + D++ LF +V ITA AGA
Sbjct: 130 GIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGA 189
Query: 548 ITILLTDRNLNTSFFDPAG 604
IT+LLTDRN+NTSFFDP+G
Sbjct: 190 ITMLLTDRNMNTSFFDPSG 208
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 169 bits (412), Expect = 3e-41
Identities = 95/201 (47%), Positives = 114/201 (56%), Gaps = 2/201 (0%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
+ +IGT+ +LIR EL PG L GD Q+YN I+TAHA N LV
Sbjct: 24 AAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLV 83
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 361
P+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H G SV
Sbjct: 84 PVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSV 143
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
DLAIFSLHL+GISS + +LPLFV A+ +TA A
Sbjct: 144 DLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLA 203
Query: 542 GAITILLTDRNLNTSFFDPAG 604
GAIT+LLTDRN NTSF+DPAG
Sbjct: 204 GAITMLLTDRNFNTSFYDPAG 224
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 169 bits (412), Expect = 3e-41
Identities = 95/201 (47%), Positives = 114/201 (56%), Gaps = 2/201 (0%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
+ +IGT+ +LIR EL PG L GD Q+YN I+TAHA N LV
Sbjct: 24 AAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLV 83
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 361
P+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H G SV
Sbjct: 84 PVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSV 143
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
DLAIFSLHL+GISS + +LPLFV A+ +TA A
Sbjct: 144 DLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLA 203
Query: 542 GAITILLTDRNLNTSFFDPAG 604
GAIT+LLTDRN NTSF+DPAG
Sbjct: 204 GAITMLLTDRNFNTSFYDPAG 224
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 168 bits (408), Expect = 1e-40
Identities = 90/201 (44%), Positives = 115/201 (57%), Gaps = 2/201 (0%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
+G++GT +LIR EL PG I G+ Q+YN ++TAHA N V
Sbjct: 27 AGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFV 86
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 361
P+++GAPD+AFPR+NNI F +VE G+GTG TVYPPLS +H G +V
Sbjct: 87 PILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAV 146
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
DLAIFSLHL+G+SS + +LPLFV +V +TAF A
Sbjct: 147 DLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLA 206
Query: 542 GAITILLTDRNLNTSFFDPAG 604
GAIT+LLTDRN NT+FFDPAG
Sbjct: 207 GAITMLLTDRNFNTTFFDPAG 227
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 162 bits (394), Expect = 5e-39
Identities = 88/201 (43%), Positives = 115/201 (57%), Gaps = 2/201 (0%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
SG++G + +LIR EL P + L+G+ QIYN ++TAHA N LV
Sbjct: 32 SGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLV 91
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 361
P+++G+PD+AFPR+NNI F +VE G GTG TVYPPLSS +H G +V
Sbjct: 92 PIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAV 151
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
DLAIFSLH++G SS S ++PLFV ++ +TAF A
Sbjct: 152 DLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVLA 211
Query: 542 GAITILLTDRNLNTSFFDPAG 604
GAIT+LLTDRN NTSFFD +G
Sbjct: 212 GAITMLLTDRNFNTSFFDASG 232
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 153 bits (371), Expect = 3e-36
Identities = 88/201 (43%), Positives = 110/201 (54%), Gaps = 2/201 (0%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
SG+ GT++ L+IR EL PGS L G+ Q++N +V HA N L+
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLL 84
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 361
PL++GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH G SV
Sbjct: 85 PLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSV 144
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
DLAIF+LHL ISS + +LPLFV ++ ITAF +
Sbjct: 145 DLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLS 204
Query: 542 GAITILLTDRNLNTSFFDPAG 604
IT+LL DRN NTSFF+ +G
Sbjct: 205 AGITMLLLDRNFNTSFFEVSG 225
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 153 bits (371), Expect = 3e-36
Identities = 88/201 (43%), Positives = 110/201 (54%), Gaps = 2/201 (0%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
SG+ GT++ L+IR EL PGS L G+ Q++N +V HA N L+
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLL 84
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 361
PL++GA D AFPRINNI F +VE+GAGTG TVYPPLSS AH G SV
Sbjct: 85 PLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSV 144
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
DLAIF+LHL ISS + +LPLFV ++ ITAF +
Sbjct: 145 DLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLS 204
Query: 542 GAITILLTDRNLNTSFFDPAG 604
IT+LL DRN NTSFF+ +G
Sbjct: 205 AGITMLLLDRNFNTSFFEVSG 225
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 152 bits (368), Expect = 7e-36
Identities = 87/200 (43%), Positives = 107/200 (53%), Gaps = 1/200 (0%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVP 184
+G+IGT+ +LIR EL PG I D+Q+YN+I+TAHA N L+P
Sbjct: 26 AGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLP 85
Query: 185 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 364
L LG PD+ FPR+NNI + +ENG GTG T+YPPLS +H G SVD
Sbjct: 86 LGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVD 145
Query: 365 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 544
LAIF LHL+GISS +L LF AV ITA AG
Sbjct: 146 LAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSLPVLAG 205
Query: 545 AITILLTDRNLNTSFFDPAG 604
IT++LTDRN NTSFF+ AG
Sbjct: 206 GITMVLTDRNFNTSFFEVAG 225
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 151 bits (366), Expect = 1e-35
Identities = 86/201 (42%), Positives = 111/201 (55%), Gaps = 2/201 (0%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
SG+ G+++ ++IR EL PGS L G+ Q++N +V HA N ++
Sbjct: 25 SGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYML 84
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 361
PL++GA D++FPRIN+I F +VE+GAGTG TVYPPLSS AH G SV
Sbjct: 85 PLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSV 144
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
DLAIFSLHL ISS S ++PLFV A+ ITAF +
Sbjct: 145 DLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPVLS 204
Query: 542 GAITILLTDRNLNTSFFDPAG 604
IT+LL DRN NTSFF+ AG
Sbjct: 205 AGITMLLMDRNFNTSFFEVAG 225
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 149 bits (361), Expect = 5e-35
Identities = 82/200 (41%), Positives = 107/200 (53%), Gaps = 1/200 (0%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVP 184
SG++GT+ +LIR EL PG I D+Q+YN+I+T+H N L+P
Sbjct: 52 SGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLP 111
Query: 185 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 364
+++G PD+AFPR+NN+ + I+ENG GTG T+YPPLS +H VD
Sbjct: 112 ILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVD 171
Query: 365 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 544
L IF LHL+GISS +L LF AV ITA A
Sbjct: 172 LGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVLAA 231
Query: 545 AITILLTDRNLNTSFFDPAG 604
AIT+LLTDRNLNTSF++ AG
Sbjct: 232 AITMLLTDRNLNTSFYELAG 251
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 147 bits (357), Expect = 2e-34
Identities = 84/201 (41%), Positives = 109/201 (54%), Gaps = 2/201 (0%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
SG+ GT++ L+IR EL PG L G++Q++N +V HA N ++
Sbjct: 25 SGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYML 84
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 361
PL++GA D AFPRINNI F +VE+GAGTG TVYPPL+S AH G SV
Sbjct: 85 PLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSV 144
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
DLAIF+LH+ ISS + +LPLFV A+ ITA +
Sbjct: 145 DLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTLPVLS 204
Query: 542 GAITILLTDRNLNTSFFDPAG 604
+T+LL DRN NTSFF+ AG
Sbjct: 205 AGVTMLLLDRNFNTSFFEVAG 225
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 138 bits (333), Expect = 1e-31
Identities = 79/201 (39%), Positives = 96/201 (47%), Gaps = 2/201 (0%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
+G + L +L+R EL PG L G+ YN I T H N V
Sbjct: 28 NGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFV 87
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 361
P+++GAPD++FPR+NN F E G GTG TVYPPLSS +H G SV
Sbjct: 88 PILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASV 147
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
DL IFS HL GI S LPLFV +V +T+F A
Sbjct: 148 DLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAIPVLA 207
Query: 542 GAITILLTDRNLNTSFFDPAG 604
AIT+LL DRN NTSF+DP G
Sbjct: 208 AAITLLLFDRNFNTSFYDPVG 228
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 137 bits (332), Expect = 2e-31
Identities = 77/201 (38%), Positives = 108/201 (53%), Gaps = 2/201 (0%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
SG++G SL +L+R EL NP L+ + Q++N ++TAHA N LV
Sbjct: 42 SGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLV 101
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 361
PL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+
Sbjct: 102 PLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSI 161
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
D+AIF+LHL+G+SS + +LPLFV +V ITA A
Sbjct: 162 DMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLA 221
Query: 542 GAITILLTDRNLNTSFFDPAG 604
+T+LL DRN NTSFF +G
Sbjct: 222 AGLTMLLMDRNFNTSFFVVSG 242
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 137 bits (332), Expect = 2e-31
Identities = 77/201 (38%), Positives = 108/201 (53%), Gaps = 2/201 (0%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
SG++G SL +L+R EL NP L+ + Q++N ++TAHA N LV
Sbjct: 42 SGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLV 101
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 361
PL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+
Sbjct: 102 PLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSI 161
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
D+AIF+LHL+G+SS + +LPLFV +V ITA A
Sbjct: 162 DMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLA 221
Query: 542 GAITILLTDRNLNTSFFDPAG 604
+T+LL DRN NTSFF +G
Sbjct: 222 AGLTMLLMDRNFNTSFFVVSG 242
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 137 bits (332), Expect = 2e-31
Identities = 77/201 (38%), Positives = 108/201 (53%), Gaps = 2/201 (0%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
SG++G SL +L+R EL NP L+ + Q++N ++TAHA N LV
Sbjct: 42 SGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLV 101
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 361
PL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+
Sbjct: 102 PLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSI 161
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
D+AIF+LHL+G+SS + +LPLFV +V ITA A
Sbjct: 162 DMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLA 221
Query: 542 GAITILLTDRNLNTSFFDPAG 604
+T+LL DRN NTSFF +G
Sbjct: 222 AGLTMLLMDRNFNTSFFVVSG 242
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 137 bits (332), Expect = 2e-31
Identities = 77/201 (38%), Positives = 108/201 (53%), Gaps = 2/201 (0%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
SG++G SL +L+R EL NP L+ + Q++N ++TAHA N LV
Sbjct: 42 SGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLV 101
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 361
PL +G+ D AFPRINN+ F +++ G G+G T+YPPL+S +H G S+
Sbjct: 102 PLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSI 161
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
D+AIF+LHL+G+SS + +LPLFV +V ITA A
Sbjct: 162 DMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLA 221
Query: 542 GAITILLTDRNLNTSFFDPAG 604
+T+LL DRN NTSFF +G
Sbjct: 222 AGLTMLLMDRNFNTSFFVVSG 242
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 135 bits (326), Expect = 9e-31
Identities = 81/201 (40%), Positives = 103/201 (51%), Gaps = 2/201 (0%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
S +IGT L +IR EL N GS L G+ Q +N ++TAHA N L+
Sbjct: 30 SAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLM 89
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 361
PL+LGA D+AF R+NNI F +VE GAGTG TVY PL+ +H G +V
Sbjct: 90 PLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAV 149
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
DLAIFSLHL+G SS ++ +PLF AV TA A
Sbjct: 150 DLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLA 209
Query: 542 GAITILLTDRNLNTSFFDPAG 604
+T+ + DRN NTSFF+ AG
Sbjct: 210 AGLTMGIFDRNFNTSFFEYAG 230
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 133 bits (321), Expect = 4e-30
Identities = 78/181 (43%), Positives = 95/181 (52%), Gaps = 2/181 (1%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
+ +IGT+ +LIR EL PG L GD Q+YN I+TAHA N LV
Sbjct: 24 AAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLV 83
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 361
P+++GAPD+AFPR+NNI F VE GAGTG TVYPPLS +H G SV
Sbjct: 84 PVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSV 143
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
DLAIFSLHL+GISS + +LPLFV A+ +TA A
Sbjct: 144 DLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLA 203
Query: 542 G 544
G
Sbjct: 204 G 204
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 130 bits (313), Expect = 3e-29
Identities = 80/204 (39%), Positives = 105/204 (51%), Gaps = 5/204 (2%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVP 184
SG++GT+ +LIR EL PG I ++Q+YN+I+TAHA N L+P
Sbjct: 54 SGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMP 113
Query: 185 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRG 352
L++G PD+AFPR+NNI F I+E G GTG T+ YPPLS +H G
Sbjct: 114 LMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSG 173
Query: 353 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 532
SVDLAIF+LHL+G+SS +L LF A +
Sbjct: 174 PSVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALFGWATWSSRSRYFL--- 230
Query: 533 XXAGAITILLTDRNLNTSFFDPAG 604
IT++LTDRN NTSFF+ AG
Sbjct: 231 ----GITMVLTDRNFNTSFFEVAG 250
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 127 bits (307), Expect = 2e-28
Identities = 73/140 (52%), Positives = 82/140 (58%)
Frame = +2
Query: 185 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 364
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 365 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 544
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 545 AITILLTDRNLNTSFFDPAG 604
AIT+LLTDRN+NTSFFDPAG
Sbjct: 124 AITMLLTDRNINTSFFDPAG 143
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 120 bits (288), Expect = 3e-26
Identities = 65/189 (34%), Positives = 95/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 44 RAELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 217
+A LG L G D ++N ++T H N +PL++GAPD+AFP
Sbjct: 142 QALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFP 201
Query: 218 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 397
R+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 202 RLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGA 261
Query: 398 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 577
SS + ++PLF +V +TA+ AGAIT+LLTDRN
Sbjct: 262 SSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNF 321
Query: 578 NTSFFDPAG 604
T+FFDPAG
Sbjct: 322 GTTFFDPAG 330
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 117 bits (282), Expect = 2e-25
Identities = 82/219 (37%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPG-------SLIGD------DQIY---NTIVTAHAXXXXXXX 139
+GIIG ++ L+RAEL PG + D DQ Y N ++TAH
Sbjct: 50 AGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYHLWNVLITAHGLIMVFFM 109
Query: 140 XXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG 307
N VP+++GAPD+AFPR+NNI F V NGAGTG
Sbjct: 110 VMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTG 169
Query: 308 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 487
TVY PLS++ G +VD+AI SLH+AG SS + ++PLFV
Sbjct: 170 WTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFV 228
Query: 488 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG 604
+V +TAF A AIT+LLTDRN T+F+D AG
Sbjct: 229 WSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAG 267
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 110 bits (264), Expect = 3e-23
Identities = 66/201 (32%), Positives = 87/201 (43%), Gaps = 2/201 (0%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELG--NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
SG +G L IR EL G L GD Q YN ++T+H N +
Sbjct: 27 SGFVGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFI 86
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 361
P++ G PD+ FPR+NN+ F + E G G G T+YP L H +
Sbjct: 87 PVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLAC 146
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
D +F++HL GISS SF LF+ A ITA A
Sbjct: 147 DFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLA 206
Query: 542 GAITILLTDRNLNTSFFDPAG 604
G +T++L DRN NTSF+D G
Sbjct: 207 GGVTLILCDRNFNTSFYDVVG 227
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 109 bits (261), Expect = 7e-23
Identities = 58/108 (53%), Positives = 69/108 (63%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 187
+G+IGT+L LLIRAELG PG+L+GDDQ N IVTAHA N LVPL
Sbjct: 27 AGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPL 86
Query: 188 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 331
++GAPD+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 87 MIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 107 bits (256), Expect = 3e-22
Identities = 60/132 (45%), Positives = 73/132 (55%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 187
SG++GTSL L+IR ELG PGSL+ DDQ+YN +VTAH N LVPL
Sbjct: 10 SGLLGTSLSLMIRTELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPL 69
Query: 188 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 367
+LGAPD+AFPR+NN+ F + G + PL G SVDL
Sbjct: 70 MLGAPDMAFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDL 127
Query: 368 AIFSLHLAGISS 403
AIF LHLAG+SS
Sbjct: 128 AIFPLHLAGVSS 139
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 106 bits (254), Expect = 5e-22
Identities = 63/198 (31%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
+G+ G+ L +LIR EL +PG G Q+YN+++T H N ++
Sbjct: 35 AGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWML 94
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 361
PL+LGAP++AFPR+N + F + G G+ T YPPLS S+
Sbjct: 95 PLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSL 153
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
D I LH GI S + DQ+ +FV +T+F A
Sbjct: 154 DTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPVLA 213
Query: 542 GAITILLTDRNLNTSFFD 595
G++ LL DRN NTSF+D
Sbjct: 214 GSLLFLLLDRNFNTSFYD 231
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 97.5 bits (232), Expect = 2e-19
Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 1/200 (0%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 187
SG+ G SL +R EL +PG + +Y++I+T HA N +PL
Sbjct: 28 SGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPL 87
Query: 188 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 367
++ D++ PR+NN+ + G G G T+YPPLS++ G +DL
Sbjct: 88 MIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDL 147
Query: 368 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITAFXXXXXXXXXAG 544
A+FSLH+AG+SS F L P+ + + T+ A
Sbjct: 148 AVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVTSVPVLAA 207
Query: 545 AITILLTDRNLNTSFFDPAG 604
+T+LL DR+ +TSF+ P G
Sbjct: 208 GLTLLLLDRHFSTSFYYPEG 227
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 83.8 bits (198), Expect = 3e-15
Identities = 49/113 (43%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
+ +IGT+ +LIR EL PG L GD Q+YN I+TAHA N LV
Sbjct: 24 AAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLV 83
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 340
P+++GAPD+AFPR+NNI F VE GAGTG TV LS I
Sbjct: 84 PVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 83.0 bits (196), Expect = 5e-15
Identities = 67/193 (34%), Positives = 78/193 (40%)
Frame = +2
Query: 20 GTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGA 199
G L R L G +IG QI VTA A L PL +GA
Sbjct: 20 GXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGA 79
Query: 200 PDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 379
P +A PR+ N+ F + G G VYPP SS +AH +VDL IF
Sbjct: 80 PXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFX 139
Query: 380 LHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITIL 559
LHLAGISS ++ LF A AIT+L
Sbjct: 140 LHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPVLAAAITML 199
Query: 560 LTDRNLNTSFFDP 598
R N SFF P
Sbjct: 200 XXXRXXNXSFFXP 212
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 80.2 bits (189), Expect = 3e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +2
Query: 185 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 364
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 365 LAIFS 379
LAI+S
Sbjct: 61 LAIYS 65
Score = 39.1 bits (87), Expect = 0.079
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1
Query: 484 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCW 603
CM C +Y TCFS S+Y IIN K KY IF W
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNW 136
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 77.8 bits (183), Expect = 2e-13
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
+G++GT +LIR EL PG+ I G+ Q+YN ++TAHA N V
Sbjct: 28 AGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFV 87
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 316
P+++G+PD+AFPR+NNI F +VE G G+G TV
Sbjct: 88 PILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 76.6 bits (180), Expect = 4e-13
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 6/205 (2%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLI----GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN* 175
+GI+G + +LIR EL G I + IYN +T H N
Sbjct: 32 AGILGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLIMLFVFIMPVGIGFYGNY 91
Query: 176 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXI-VENGAGTG*TVYPPLSSNIAHR- 349
L+P+++G +++ PR+N I F + + +G T+YPPLS+ A
Sbjct: 92 LIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNI 151
Query: 350 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 529
G ++DL++ +H+ GISS +F + ++ ++ +T+
Sbjct: 152 GVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYNFSIIVTSILLIGSL 211
Query: 530 XXXAGAITILLTDRNLNTSFFDPAG 604
AIT LL DRN+N++ +D G
Sbjct: 212 PILGVAITGLLLDRNINSTIYDVIG 236
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 76.6 bits (180), Expect = 4e-13
Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 3/198 (1%)
Frame = +2
Query: 11 GIIGTSLRLLIRAELGNPG-SLIGDD--QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
G+IG + +LIR EL G +I D +IYN + T H N L
Sbjct: 32 GMIGFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLY 91
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSV 361
P++LG D+ +PR+N +E G+GTG T+YPPLS+++++ G +
Sbjct: 92 PVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--I 149
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
D IF L AGI+S D++ ++ +T+F
Sbjct: 150 DFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWSIVLTSFLLLLSLPVVT 209
Query: 542 GAITILLTDRNLNTSFFD 595
++ DR+ NT FF+
Sbjct: 210 AVFLMVFLDRHYNTMFFE 227
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 76.2 bits (179), Expect = 6e-13
Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 4/200 (2%)
Frame = +2
Query: 11 GIIGTSLRLLIRAELGNPG-SLIGDDQI--YNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
G G L +++R EL + +I + + YN I T H N +
Sbjct: 29 GSYGFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGIIMIFFNIMPGLFGGFGNYFL 88
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-S 358
P++ G+P++A+PRIN+I E G GTG T+YPPLS+++ +
Sbjct: 89 PILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVA 148
Query: 359 VDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 538
VD+ IF L ++G++S + L + ++ IT+
Sbjct: 149 VDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLGILSVSTWSLIITSGMLLLTLPVL 208
Query: 539 AGAITILLTDRNLNTSFFDP 598
G + +LL+D + NT FFDP
Sbjct: 209 TGGVLMLLSDLHFNTLFFDP 228
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 75.8 bits (178), Expect = 7e-13
Identities = 46/113 (40%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
S +IGT L +IR EL N GS L G+ Q +N ++TAHA N L+
Sbjct: 30 SAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLM 89
Query: 182 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 340
PL+LGA D+AF R+NNI F +VE GAGTG TV SS +
Sbjct: 90 PLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 75.4 bits (177), Expect = 1e-12
Identities = 58/196 (29%), Positives = 83/196 (42%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 187
S ++G S LL R +L P L D +YN VT H N L+P
Sbjct: 23 SALLGMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPY 80
Query: 188 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDL 367
PD+ FPR+N + F ++ + A G T YPPLSS SV+
Sbjct: 81 HCNLPDLLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----LSPSVEF 131
Query: 368 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 547
++FSLHLAGI+S + L LF ++ + + A
Sbjct: 132 SVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCWSIVLVSLLLVLSLPVLAVG 189
Query: 548 ITILLTDRNLNTSFFD 595
IT++LTD++L T F+D
Sbjct: 190 ITLILTDKHLGTCFYD 205
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 75.4 bits (177), Expect = 1e-12
Identities = 60/198 (30%), Positives = 79/198 (39%)
Frame = +2
Query: 11 GIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 190
G IG L LLIR L +P + +YN +VT H N +P+
Sbjct: 125 GFIGLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFFFLMPILIGGFGNYFLPIF 184
Query: 191 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 370
L D+ PR+N++ G G G T+YPPLS G VD
Sbjct: 185 LCLDDLLLPRLNSLSLWLMVPSIFYMELSLYY--GCGIGWTLYPPLSI-WEGSGFGVDYL 241
Query: 371 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 550
+FSLHLAG+SS S + V A T+ A I
Sbjct: 242 MFSLHLAGVSSLIGSVNFISTIFSRLSFNCS-----IIVWAYLFTSVLLLLSLPVLASGI 296
Query: 551 TILLTDRNLNTSFFDPAG 604
T+LL DRN T+FF+P+G
Sbjct: 297 TMLLFDRNFGTAFFEPSG 314
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 73.3 bits (172), Expect = 4e-12
Identities = 62/204 (30%), Positives = 88/204 (43%), Gaps = 8/204 (3%)
Frame = +2
Query: 17 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 196
+G + +L+R EL +PG + + YN+++T+H N L+PL++G
Sbjct: 111 VGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIG 169
Query: 197 APDIAFPRINNIRF--XXXXXXXXXXXXXXIVE-NGAGTG*TVYPPLS-----SNIAHRG 352
A D+AFPRIN I F I E A TG T+Y PLS N A+ G
Sbjct: 170 ADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGEGMGNQANAG 229
Query: 353 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 532
VDL + LHL+G+S+ S+ L +F + +
Sbjct: 230 --VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLDIFSWTILTQSGLILFAFP 287
Query: 533 XXAGAITILLTDRNLNTSFFDPAG 604
AI +LL DRN TSFF G
Sbjct: 288 LLGSAIMMLLFDRNFGTSFFAGEG 311
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 70.9 bits (166), Expect = 2e-11
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +2
Query: 323 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 502
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 503 TAFXXXXXXXXXAGAITILLTDR 571
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 35.1 bits (77), Expect = 1.3
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +1
Query: 157 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 282
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 70.5 bits (165), Expect = 3e-11
Identities = 51/180 (28%), Positives = 73/180 (40%)
Frame = +2
Query: 62 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 241
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 242 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXX 421
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119
Query: 422 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA 601
+F + LFV + AGA+T+L D+ L T+FF+PA
Sbjct: 120 FLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPA 179
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 69.3 bits (162), Expect = 6e-11
Identities = 56/197 (28%), Positives = 78/197 (39%), Gaps = 1/197 (0%)
Frame = +2
Query: 14 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 193
++G LLIR EL PG I D YN T H N ++PL+L
Sbjct: 58 LVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLML 117
Query: 194 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 373
GA D+AFPR+N + ++ G TG T Y P S AH +V +
Sbjct: 118 GAKDVAFPRLNLLSL-YIYLAGAVLALWGMLNGGLDTGWTFYTPYS---AHTTTTVAPVL 173
Query: 374 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 553
F + G SS ++ ++PLFV A+ T+ G +
Sbjct: 174 FGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAIYATS-CIQVLATPVIGLLL 232
Query: 554 ILLTDRNL-NTSFFDPA 601
+L+T NL FDPA
Sbjct: 233 VLVTVENLFGFGMFDPA 249
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 69.3 bits (162), Expect = 6e-11
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Frame = +2
Query: 11 GIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVP 184
G+ GT++ ++IR EL PG+ L G+ Q++N +V HA N L+P
Sbjct: 26 GMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLP 85
Query: 185 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 316
L++GA D++F R+NNI F +VE+GAGTG TV
Sbjct: 86 LMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 68.9 bits (161), Expect = 9e-11
Identities = 55/207 (26%), Positives = 83/207 (40%), Gaps = 14/207 (6%)
Frame = +2
Query: 14 IIGTSLRLLIRAELGNP-------GSLI-GDDQI-----YNTIVTAHAXXXXXXXXXXXX 154
++G +L +LIR + G P G L+ G+ + Y I T H
Sbjct: 47 LVGGALAMLIRWQWGFPYRPVPLVGRLLFGESGVIGPATYQQIFTTHGLVMIFFAVTPVL 106
Query: 155 XXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS 331
N L+PL++GA D+AFPR+N F G AG G T Y PLS
Sbjct: 107 IGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLS 166
Query: 332 SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAF 511
+N+ G L + ++ + G+SS ++ +LPL + + +TA
Sbjct: 167 TNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRLPLTIWGLWLTAI 226
Query: 512 XXXXXXXXXAGAITILLTDRNLNTSFF 592
A +LL DR+ T FF
Sbjct: 227 LNALFVPVLGSAALLLLLDRSFGTEFF 253
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 68.9 bits (161), Expect = 9e-11
Identities = 55/199 (27%), Positives = 79/199 (39%), Gaps = 2/199 (1%)
Frame = +2
Query: 14 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 193
+I SL LL R +L P S Y VT H N +VPL +
Sbjct: 37 LIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWFASPFAFGLA-NYIVPLQI 95
Query: 194 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLA 370
GA D+AFPR+N + + E+GA G T+Y PL++ I G +DLA
Sbjct: 96 GARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGIGLDLA 155
Query: 371 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 550
++ L +S + ++P+F ++ T
Sbjct: 156 ALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSILFTVILMLWAFPPLMVGG 215
Query: 551 TILLTDRNLNTSFF-DPAG 604
+LL DRNL T FF +PAG
Sbjct: 216 ALLLLDRNLGTEFFLNPAG 234
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 68.5 bits (160), Expect = 1e-10
Identities = 52/200 (26%), Positives = 79/200 (39%), Gaps = 3/200 (1%)
Frame = +2
Query: 14 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 193
++G L +++R EL P + + D +YN + T H N L+P ++
Sbjct: 52 LVGGLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMI 110
Query: 194 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNIAHRGRSVD 364
GAPD+AFP++N F G A +G YPP+S + + H
Sbjct: 111 GAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEF 170
Query: 365 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 544
L I ++ L+GISS F ++P+FV G
Sbjct: 171 LWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTG 230
Query: 545 AITILLTDRNLNTSFFDPAG 604
+LL D + TSFF P G
Sbjct: 231 GAVMLLFDLSFGTSFFRPEG 250
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 68.1 bits (159), Expect = 1e-10
Identities = 51/194 (26%), Positives = 76/194 (39%)
Frame = +2
Query: 17 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 196
+G LL+R +L P + +++N + T H N VPL++G
Sbjct: 49 VGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIG 107
Query: 197 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 376
A D+AFPR+N+ F + + G Y PLSS + VD I
Sbjct: 108 ARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQGVDYWII 167
Query: 377 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 556
L + GI S S ++PLFV + + A A+ +
Sbjct: 168 GLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILALPALNSALAM 227
Query: 557 LLTDRNLNTSFFDP 598
LL DR L ++FFDP
Sbjct: 228 LLIDRWLGSAFFDP 241
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 66.9 bits (156), Expect = 3e-10
Identities = 52/195 (26%), Positives = 76/195 (38%)
Frame = +2
Query: 17 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 196
+G LLIR EL PG I D YN + T H N L+P+++G
Sbjct: 52 LGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIG 111
Query: 197 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 376
A D+AFP++N + F +V+ GA TG T Y P S+ + V L F
Sbjct: 112 AKDVAFPKLNLLSF-YVYLAGAVVALFGMVQGGADTGWTFYTPYSTTTITKVVPVLLGAF 170
Query: 377 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 556
L G SS + +LPLFV ++ T+ ++ +
Sbjct: 171 IL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVWSIYATSVIQILATPVLGMSLLL 227
Query: 557 LLTDRNLNTSFFDPA 601
+ + FDPA
Sbjct: 228 VAVEHAFGWGIFDPA 242
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 66.5 bits (155), Expect = 5e-10
Identities = 54/196 (27%), Positives = 78/196 (39%), Gaps = 1/196 (0%)
Frame = +2
Query: 17 IGTSLRLLIRAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 193
+G L LL+R +L P + IG D+ YN I T H LVPL++
Sbjct: 46 LGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMFLFAVPVMQAMAIY-LVPLMV 103
Query: 194 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 373
G IAFPR+N + V+ G G Y PLS G+ D+
Sbjct: 104 GTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGKRADIWA 163
Query: 374 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 553
+ +S+ S D++PLFV ++ +T+F A T
Sbjct: 164 QMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAMPAIMIAST 223
Query: 554 ILLTDRNLNTSFFDPA 601
L+ DR + T FF+PA
Sbjct: 224 SLILDRLVGTHFFNPA 239
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 65.7 bits (153), Expect = 8e-10
Identities = 51/196 (26%), Positives = 75/196 (38%), Gaps = 1/196 (0%)
Frame = +2
Query: 17 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 196
+G + LLIRAEL PG ++ +N + T H N ++PL +G
Sbjct: 55 LGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIG 113
Query: 197 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAHRGRSVDLAI 373
APD+AFPR+N F + GA G T+Y PLS I G D+ I
Sbjct: 114 APDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHSPGLGSDMWI 173
Query: 374 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 553
+ GI S + ++P+F + + + A
Sbjct: 174 VGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWNIFVVSVLALLIFPLLLAAAL 233
Query: 554 ILLTDRNLNTSFFDPA 601
+L DR L +DPA
Sbjct: 234 GVLYDRKLGGHLYDPA 249
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 64.1 bits (149), Expect = 2e-09
Identities = 55/196 (28%), Positives = 73/196 (37%)
Frame = +2
Query: 17 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 196
IG S +R EL P ++YN ++T H N L+PL++G
Sbjct: 44 IGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVG 102
Query: 197 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 376
D+AFPR+N + F V G T YPPLS G +L I
Sbjct: 103 TEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKWGE--ELWIL 159
Query: 377 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 556
SL L G SS +PLF A+ T+ A A+ +
Sbjct: 160 SLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLSTPVLASALIL 219
Query: 557 LLTDRNLNTSFFDPAG 604
L D TSFF+P G
Sbjct: 220 LSFDLIAGTSFFNPVG 235
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 63.3 bits (147), Expect = 4e-09
Identities = 49/192 (25%), Positives = 76/192 (39%), Gaps = 2/192 (1%)
Frame = +2
Query: 35 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 214
LL+R EL + +YN ++T+H N +PL++ A D+AF
Sbjct: 91 LLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAF 149
Query: 215 PRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 388
PRIN I F ++ A T T+Y PLS ++ +VD+ + LHL
Sbjct: 150 PRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS--SPAVDMMMLGLHL 207
Query: 389 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 568
G+S+ + L +F + + A+ +LL D
Sbjct: 208 TGVSATMGAINFIATIFTERGEDVGWPDLDIFSWTMLTQSGLILFAFPLFGSALIMLLLD 267
Query: 569 RNLNTSFFDPAG 604
RN T+FF AG
Sbjct: 268 RNFGTTFFTVAG 279
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 62.5 bits (145), Expect = 7e-09
Identities = 50/195 (25%), Positives = 72/195 (36%)
Frame = +2
Query: 14 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 193
+IG LL+R +LG P + +YN + T H N +VPL++
Sbjct: 47 LIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMI 105
Query: 194 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 373
GA D+AFPR+N + V G Y PL+ VD I
Sbjct: 106 GARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAPTAGVDYWI 165
Query: 374 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 553
+ L G++S + +++PLFV + AF A
Sbjct: 166 VGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQLVVAFILIFAFPVLTVATI 225
Query: 554 ILLTDRNLNTSFFDP 598
LL DR+ T FF P
Sbjct: 226 QLLFDRHFGTRFFLP 240
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 61.7 bits (143), Expect = 1e-08
Identities = 46/186 (24%), Positives = 68/186 (36%)
Frame = +2
Query: 35 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 214
L++RA+L P + D YN I T H N +VPL +GA D+AF
Sbjct: 76 LMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAF 134
Query: 215 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 394
P +NN+ F ++ G T Y PL+SN G + + L +AG
Sbjct: 135 PYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAG 194
Query: 395 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRN 574
I + + ++P+F IT A+ +L DR
Sbjct: 195 IGTLMTGINFMVTILKMRTKGMTLMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRL 254
Query: 575 LNTSFF 592
FF
Sbjct: 255 FGAHFF 260
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 61.3 bits (142), Expect = 2e-08
Identities = 46/177 (25%), Positives = 70/177 (39%), Gaps = 4/177 (2%)
Frame = +2
Query: 86 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 265
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 266 XXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 433
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 434 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG 604
+ +LPL + A+ ITA A ++L DR + T FF P G
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEG 262
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 59.3 bits (137), Expect = 7e-08
Identities = 52/193 (26%), Positives = 76/193 (39%), Gaps = 2/193 (1%)
Frame = +2
Query: 29 LRLLIRAELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPD 205
+ +LIR EL G I DD +YNT + H N +PL++GA D
Sbjct: 35 MAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKD 94
Query: 206 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLH 385
+AFPR+N + + + T YPP S I H + FS+
Sbjct: 95 VAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSI-ITHGNTA--FYTFSVL 151
Query: 386 LAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG-AITILL 562
L G +S +++L +FV A + AF G A+T+L
Sbjct: 152 LLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLT 210
Query: 563 TDRNLNTSFFDPA 601
D+ + T FFD A
Sbjct: 211 FDKYIGTHFFDAA 223
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 7e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +2
Query: 281 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 403
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 59.3 bits (137), Expect = 7e-08
Identities = 48/190 (25%), Positives = 72/190 (37%), Gaps = 1/190 (0%)
Frame = +2
Query: 35 LLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 214
LLIR +L P + + YN I+T H N +VPL+LGA D+A
Sbjct: 47 LLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVAL 106
Query: 215 PRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 391
PR+N + GA G T Y P S A VD + ++ L
Sbjct: 107 PRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQSESGVDFYLAAILLL 163
Query: 392 GISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDR 571
G SS S ++P++V +V + A ++L +R
Sbjct: 164 GFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSVFAASVLNLFSLAGLTAATLLVLLER 223
Query: 572 NLNTSFFDPA 601
+ S+F+PA
Sbjct: 224 KIGLSWFNPA 233
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 57.2 bits (132), Expect = 3e-07
Identities = 54/196 (27%), Positives = 79/196 (40%), Gaps = 1/196 (0%)
Frame = +2
Query: 17 IGTSLRLLIRAELGNPGS-LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 193
+G +L LLIRAEL PG+ I D +N + T H N VP+++
Sbjct: 37 LGGALALLIRAELFFPGTQFIADSMTFNRMFTVHGTTLIFLFILPFASAVG-NYFVPIMV 95
Query: 194 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 373
D+A+P++N I F + T PP S I+ G + D+ I
Sbjct: 96 RYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT-----PPYSV-ISAPGPAADMWI 149
Query: 374 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 553
F L + GISS S Q+PL + ++ A A+
Sbjct: 150 FGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYLSSSLIVLVALPTFAAALL 209
Query: 554 ILLTDRNLNTSFFDPA 601
+LLTDR + FF+PA
Sbjct: 210 MLLTDRLGVSGFFNPA 225
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 56.0 bits (129), Expect = 6e-07
Identities = 40/195 (20%), Positives = 73/195 (37%)
Frame = +2
Query: 14 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 193
++G + IR +L P + Q YN ++T H N +VPL +
Sbjct: 40 LVGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQI 98
Query: 194 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 373
GA D++FP +N + F + G T Y LS + +G +D +
Sbjct: 99 GARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSKGHGIDFFV 156
Query: 374 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 553
L ++G+ + ++ +LPLF + + +
Sbjct: 157 LGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFAFPPLTVGLA 216
Query: 554 ILLTDRNLNTSFFDP 598
+++ DR T+FF+P
Sbjct: 217 LMMLDRLFGTNFFNP 231
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 52.8 bits (121), Expect = 6e-06
Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
Frame = +2
Query: 170 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 346
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 347 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 526
+ VDL + + +AG SS + LF +V +
Sbjct: 144 KSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWSVLAASMLMVTA 203
Query: 527 XXXXAGAITILLTDRNLNTSFFDP 598
A +LL +R+L FF P
Sbjct: 204 LPPLAAGAIMLLLERHLGMHFFTP 227
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 52.8 bits (121), Expect = 6e-06
Identities = 52/201 (25%), Positives = 76/201 (37%), Gaps = 5/201 (2%)
Frame = +2
Query: 11 GIIGTSLRLLIRAELGNPGSL-IGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPL 187
G++ L L+R +LG PG+ D Y +T H N L+PL
Sbjct: 53 GLVALVLSWLMRLQLGFPGTFSFIDANQYLQFITMHGMIMVIYLLTALFLGGFGNYLIPL 112
Query: 188 ILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP--LSSNIAHRGRS 358
++GA D+ FP +N + + V G G G T+YPP + S +
Sbjct: 113 MVGARDMVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPPQAILSGTPGQDWG 172
Query: 359 VDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV-GITAFXXXXXXXX 535
+ L + SL L I + +LPL V + T
Sbjct: 173 IVLMLSSLILFIIGFTMGGLNYVVTVLQARTRGMTLMRLPLTVWGIFTATVMALLAFPAL 232
Query: 536 XAGAITILLTDRNLNTSFFDP 598
G++ +LL DR L TSFF P
Sbjct: 233 FVGSVMLLL-DRLLGTSFFMP 252
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 52.4 bits (120), Expect = 8e-06
Identities = 44/196 (22%), Positives = 70/196 (35%)
Frame = +2
Query: 14 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 193
++G L +LIRA+L P S + YN + T H L+P +L
Sbjct: 45 VVGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEGFAVY-LLPKLL 103
Query: 194 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 373
G+ D+AFPR+ F + +G +YPPLSS + G + D +
Sbjct: 104 GSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGINSDFWL 163
Query: 374 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 553
+ IS+ S ++P+F +TA
Sbjct: 164 IGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALVTAVMILTGFPPLILGSI 223
Query: 554 ILLTDRNLNTSFFDPA 601
+L +R + FF A
Sbjct: 224 LLELERAFDMPFFQAA 239
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 52.0 bits (119), Expect = 1e-05
Identities = 44/196 (22%), Positives = 70/196 (35%)
Frame = +2
Query: 14 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 193
I+G L LL+R +L P + D + YN + + H ++PL+L
Sbjct: 52 ILGVILALLMRLQLAVPENDFMDPETYNQVFSMHGITMMFLFAIPVMEGFAVY-IIPLML 110
Query: 194 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 373
G D+ FPR+N + ++ G YPPL+ G +D
Sbjct: 111 GTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGLGLDFYT 170
Query: 374 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 553
+ IS+ S +++P+FV AV + +F A
Sbjct: 171 TVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPPLVIASL 230
Query: 554 ILLTDRNLNTSFFDPA 601
+L DR FF A
Sbjct: 231 MLALDRMAGMHFFTAA 246
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 51.2 bits (117), Expect = 2e-05
Identities = 48/192 (25%), Positives = 75/192 (39%), Gaps = 4/192 (2%)
Frame = +2
Query: 29 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 208
LR ++ + G L + + Y +VT H N L+PL +GA D+
Sbjct: 83 LRPILGGWITEAGKL--EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDM 140
Query: 209 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIF 376
A +N + + +E G +G +YPPLS+ ++ G + + +
Sbjct: 141 ASGFMNMLSYWFFFGSSVIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLI 200
Query: 377 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 556
S+ L IS SF +LPL + A ITA A +
Sbjct: 201 SMALFIISVLLGGINYITTVINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALL 260
Query: 557 LLTDRNLNTSFF 592
L+ DR+L TSFF
Sbjct: 261 LIFDRSLGTSFF 272
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 49.2 bits (112), Expect = 7e-05
Identities = 37/141 (26%), Positives = 54/141 (38%)
Frame = +2
Query: 170 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 349
N +VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSP 184
Query: 350 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 529
VD I++L ++GI + +P+F
Sbjct: 185 DVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFTWTCTWANVLIATSF 244
Query: 530 XXXAGAITILLTDRNLNTSFF 592
GA+ +L DR L+ FF
Sbjct: 245 PILTGALAMLALDRYLDFHFF 265
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 48.8 bits (111), Expect = 1e-04
Identities = 45/196 (22%), Positives = 72/196 (36%)
Frame = +2
Query: 14 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 193
++G L++R +L P + + Y+++ T H N L PL+L
Sbjct: 65 LLGGVEALVMRIQLARPNATVLTPAQYDSLFTMHGVTMIFLYALPVLSGFA-NYLWPLML 123
Query: 194 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 373
G+ D+AFPR+ + + G Y PL+S G ++D+
Sbjct: 124 GSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSAGANIDIYG 183
Query: 374 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 553
+ L GIS+ S D+LP+ V + + A
Sbjct: 184 LGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGTLTASVSNLVAVPSVSLAFL 243
Query: 554 ILLTDRNLNTSFFDPA 601
+L DRN T FFD A
Sbjct: 244 LLWLDRNAGTHFFDVA 259
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 48.4 bits (110), Expect = 1e-04
Identities = 35/157 (22%), Positives = 61/157 (38%)
Frame = +2
Query: 14 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 193
+IG L +LIRA+L +P S + Y + T H L+P +L
Sbjct: 45 LIGGILAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFLFAIPMFEGLTIY-LLPKML 103
Query: 194 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 373
G+ D+A+PR++ F + +G +YPPL+S + G + D +
Sbjct: 104 GSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGINSDFWL 163
Query: 374 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 484
+ IS+ S D++P++
Sbjct: 164 LGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIY 200
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 48.4 bits (110), Expect = 1e-04
Identities = 42/194 (21%), Positives = 69/194 (35%)
Frame = +2
Query: 14 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 193
+I LL+R +L P + + YN + T H L+PL++
Sbjct: 71 LIAGVFALLVRLQLMVPENTFLSSETYNQLFTMHGTIMMFLFAIPMLEGFAVY-LIPLMI 129
Query: 194 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAI 373
GA D+ FPR+ + + + G +Y PLS++ G S D +
Sbjct: 130 GARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGLSADFWL 189
Query: 374 FSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 553
+ LA I+S S ++P+ + + TAF
Sbjct: 190 IGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPPLIIGSI 249
Query: 554 ILLTDRNLNTSFFD 595
+L +R L FFD
Sbjct: 250 LLEAERLLGLPFFD 263
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHA 118
SG+IG+S+ +LIR EL GS++ +QIYNT+VT+HA
Sbjct: 10 SGLIGSSMSMLIRLELETCGSVLRSEQIYNTLVTSHA 46
Score = 37.1 bits (82), Expect = 0.32
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +2
Query: 350 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 529
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 530 XXXAGAITILLTDRNLNT 583
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 48.4 bits (110), Expect = 1e-04
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LV 181
+G+ G +L +IR EL +P S GD Y +VTAH N L+
Sbjct: 74 TGLSGAALATMIRMELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLI 133
Query: 182 PLILGAPDIAFPRINNIRF 238
P +G+ D+A+PR+N+I F
Sbjct: 134 PYHVGSKDVAYPRLNSIGF 152
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.2 bits (107), Expect = 3e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +1
Query: 487 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 591
M C +YS +TC WSYYN IN SKLKYI+F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 46.0 bits (104), Expect = 7e-04
Identities = 38/176 (21%), Positives = 60/176 (34%), Gaps = 3/176 (1%)
Frame = +2
Query: 86 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 265
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 266 XXXXXIVENGAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 436
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 437 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG 604
+F +LP+ + + ITA + + DR T FF P+G
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSG 265
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 46.0 bits (104), Expect = 7e-04
Identities = 43/195 (22%), Positives = 70/195 (35%), Gaps = 2/195 (1%)
Frame = +2
Query: 14 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 193
+ G L LL R EL + G+ + YN V+ H N LVPL +
Sbjct: 38 VFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFISPFAFGFA-NYLVPLQI 96
Query: 194 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS--SNIAHRGRSVDL 367
GA D+AFPR+N + + G T+Y PL+ + I G
Sbjct: 97 GADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNTPAYIPGEGLGATS 156
Query: 368 AIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGA 547
+ +L + + +P+F ++ +T + A
Sbjct: 157 VVLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSLSINLTVWMMLFAFAALLAA 216
Query: 548 ITILLTDRNLNTSFF 592
+ IL +D L T++F
Sbjct: 217 LMILASDHILGTTYF 231
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 45.2 bits (102), Expect = 0.001
Identities = 35/141 (24%), Positives = 51/141 (36%)
Frame = +2
Query: 170 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 349
N VPL +GA D+AFP +N++ F V A TG YPPL+
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSP 183
Query: 350 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 529
G VD I++L L+G+ + +P+F
Sbjct: 184 GVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASF 243
Query: 530 XXXAGAITILLTDRNLNTSFF 592
A+ +L DR L+ F
Sbjct: 244 PILTAALALLTVDRYLDFHIF 264
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 44.0 bits (99), Expect = 0.003
Identities = 34/123 (27%), Positives = 41/123 (33%)
Frame = +1
Query: 214 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTTFSX 393
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPTSCS 138
Query: 394 XXXXXXXXXXXXXXXXXTXXXXXXXXXXXXCMSCRDYSXXXXXXTTCFSWSYYNIINRSK 573
CM +YS + S+YNI K
Sbjct: 139 SVFNSSLNQLYYNNHQYARYSNNPWTNPSVCMKSNNYSCTSTSFSPSIGSSHYNITYWPK 198
Query: 574 LKY 582
KY
Sbjct: 199 PKY 201
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 43.6 bits (98), Expect = 0.004
Identities = 37/141 (26%), Positives = 51/141 (36%)
Frame = +2
Query: 170 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 349
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 350 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 529
G VD I+SL LA + S +PLF TA
Sbjct: 204 GIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAM 263
Query: 530 XXXAGAITILLTDRNLNTSFF 592
L DR L+ FF
Sbjct: 264 PPLTVVTLQLALDRYLDFHFF 284
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 42.7 bits (96), Expect = 0.006
Identities = 41/194 (21%), Positives = 64/194 (32%)
Frame = +2
Query: 17 IGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILG 196
+G L L IR +L P + YN ++T HA N +PL LG
Sbjct: 49 LGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLG 108
Query: 197 APDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 376
D+A PR+N G T Y PL+ + G SV +
Sbjct: 109 VRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTFYYPLTMDGNQTGVSVFMV-- 166
Query: 377 SLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 556
++ L G+ S ++P+F ++ T+ A +
Sbjct: 167 AVILNGLGSLLGSANFAATIVNLRAPGMGLWKMPVFAWSIFATSILQLLTLGGLTAAALL 226
Query: 557 LLTDRNLNTSFFDP 598
+ L S F+P
Sbjct: 227 TYLEIKLGLSMFNP 240
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 42.7 bits (96), Expect = 0.006
Identities = 41/198 (20%), Positives = 71/198 (35%), Gaps = 4/198 (2%)
Frame = +2
Query: 14 IIGTSLRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLIL 193
++G ++R +L PG + + +N + T HA N +PL++
Sbjct: 45 LVGGLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMI 103
Query: 194 GAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG----TG*TVYPPLSSNIAHRGRSV 361
GA D+AFPR+N + ++ G G Y L+S G
Sbjct: 104 GARDVAFPRLNAFSYWIYLFGALFINAGWLMGTAGGHVPDIGWFGYANLTSVQFTSGLGP 163
Query: 362 DLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 541
D L L GI + + ++P+FV +T+
Sbjct: 164 DFWTLGLLLLGIGTLVSGFNFIVTILNMRAPGMTLMKMPVFVWTTLVTSAIIIFAFPSVT 223
Query: 542 GAITILLTDRNLNTSFFD 595
A+ +L+ DR +FF+
Sbjct: 224 VALIMLMFDRTFAANFFE 241
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 42.3 bits (95), Expect = 0.008
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +2
Query: 170 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 349
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 350 GRSVDLAIFSLHLAGISS 403
VD +S+ ++GI +
Sbjct: 179 WVGVDYWNWSIQISGIGT 196
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 40.3 bits (90), Expect = 0.034
Identities = 35/140 (25%), Positives = 52/140 (37%), Gaps = 1/140 (0%)
Frame = +2
Query: 176 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRG 352
L+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 111 LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPY 170
Query: 353 RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 532
D A ++ L GI + LPLFV AV A
Sbjct: 171 LGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAVFWVAAISWFVFP 230
Query: 533 XXAGAITILLTDRNLNTSFF 592
G +LL ++ S++
Sbjct: 231 EITGLFFLLLVGNLMHASYY 250
>UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=2;
Saccharomycetaceae|Rep: Putative COX1/OXI3 intron 2
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 854
Score = 40.3 bits (90), Expect = 0.034
Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTAHA 118
SG+ GT++ L+IR EL PGS L G+ Q++N +V HA
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHA 63
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 39.5 bits (88), Expect = 0.060
Identities = 43/188 (22%), Positives = 70/188 (37%), Gaps = 5/188 (2%)
Frame = +2
Query: 56 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 235
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 236 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS--NIAHRGRSVDLAIFSLHLA--GIS 400
F + +G +G T Y LS+ A G + ++ + +A I+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGDAGPGMAYGQTLWGISIAIFCIA 193
Query: 401 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 580
S S ++P+ A IT+ A +L DR
Sbjct: 194 SLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAG 253
Query: 581 TSFFDPAG 604
TSFF P+G
Sbjct: 254 TSFFIPSG 261
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 38.3 bits (85), Expect = 0.14
Identities = 42/194 (21%), Positives = 66/194 (34%), Gaps = 1/194 (0%)
Frame = +2
Query: 14 IIGTSLRLLIRAELGNP-GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLI 190
I+ L L++R +L P L+G D YN I T H L+P +
Sbjct: 55 ILAGILGLIMRTQLAVPENDLVGQD-FYNQIFTVHGTTMMFLFAVPVVEALGVM-LLPQM 112
Query: 191 LGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLA 370
L A D+ FPR++ + G +YPPL+ G + D
Sbjct: 113 LAARDLPFPRLSAFAIWAYIVGGLVFFSTVFYDLAPKGGWFMYPPLTLKEYSPGDNADFW 172
Query: 371 IFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAI 550
+ + IS+ S ++P+F A+ I A A
Sbjct: 173 LLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFAWAMLIFAAMIMIAFPAVILAT 232
Query: 551 TILLTDRNLNTSFF 592
+L +R+ FF
Sbjct: 233 MLLEIERSFGWPFF 246
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 35.9 bits (79), Expect = 0.74
Identities = 35/145 (24%), Positives = 54/145 (37%), Gaps = 1/145 (0%)
Frame = +2
Query: 170 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS-SNIAH 346
N LVP ++GA D+ +P+IN + F ++ G +Y PLS +
Sbjct: 80 NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVN 138
Query: 347 RGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 526
G +L +L L+G+SS + ++PLFV TA
Sbjct: 139 YGLGTNLIQIALILSGLSS--TLTGVNFVMTITKMKKVPYLKMPLFVWGFFTTAILMIIA 196
Query: 527 XXXXAGAITILLTDRNLNTSFFDPA 601
+ +R T FFD A
Sbjct: 197 MPSLTAGLVFAYLERLWGTPFFDSA 221
>UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3
precursor (DNA endonuclease I- SceIII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI3 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceIII)]; n=5; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI3 precursor (DNA
endonuclease I- SceIII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI3 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceIII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 403
Score = 35.5 bits (78), Expect = 0.97
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIV 106
SG+ GT++ L+IR EL PGS L G+ Q++N +V
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLV 59
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 35.1 bits (77), Expect = 1.3
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +2
Query: 467 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 592
DQ+ LF ++ IT AG IT+LL+DRN N FF
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFF 53
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 34.3 bits (75), Expect = 2.3
Identities = 35/190 (18%), Positives = 63/190 (33%)
Frame = +2
Query: 29 LRLLIRAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 208
L +L+R +L PG+ +N T H L+P +LGA D+
Sbjct: 78 LAVLMRVQLAVPGNDFLSADRFNQFFTMHGSAMMFLFAVPMFEAISII-LLPALLGARDL 136
Query: 209 AFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 388
FPR++ + + + +G +YPPL++ G D+ + L
Sbjct: 137 PFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFMYPPLATQ--DEGLGSDIWLLGLSF 194
Query: 389 AGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTD 568
++S + +PL+ V + + +
Sbjct: 195 IEVASIAAAVELIVGVLKCRPPGMRVNLMPLYAWYVLVVGGMILFAFPPLIAGDLLFEME 254
Query: 569 RNLNTSFFDP 598
R + FFDP
Sbjct: 255 RGFDWPFFDP 264
>UniRef50_A5H2T8 Cluster: Cytochrome c oxidase subunit 1; n=1;
Pichia guilliermondii|Rep: Cytochrome c oxidase subunit
1 - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 168
Score = 34.3 bits (75), Expect = 2.3
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAEL--GNPGSLIGDDQIYNTIVTAHA 118
+ ++GT + ++IR EL GN G++Q YN ++T HA
Sbjct: 3 ASMVGTGMSVIIRMELSSGNSQFFHGNNQAYNVLITGHA 41
>UniRef50_P03875 Cluster: Putative COX1/OXI3 intron 1 protein; n=1;
Saccharomyces cerevisiae|Rep: Putative COX1/OXI3 intron
1 protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 834
Score = 33.5 bits (73), Expect = 3.9
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGS--LIGDDQIYNTIVTA 112
SG+ GT++ L+IR EL PGS L G+ Q++N T+
Sbjct: 25 SGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNGAPTS 61
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 32.7 bits (71), Expect = 6.9
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLI--GDDQIYN 97
+G++GT +LIR EL PG+ I G+ Q+YN
Sbjct: 28 AGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|Rep:
Maturase-like protein - Pellia epiphylla
Length = 843
Score = 32.7 bits (71), Expect = 6.9
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +2
Query: 8 SGIIGTSLRLLIRAELGNPGSLI--GDDQIYN 97
+G++GT +LIR EL PG+ I G+ Q+YN
Sbjct: 28 AGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 6.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -2
Query: 570 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 448
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q8ID15 Cluster: Putative uncharacterized protein
MAL13P1.352; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.352 - Plasmodium
falciparum (isolate 3D7)
Length = 1106
Score = 32.3 bits (70), Expect = 9.1
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 247 TPLPYIINFKKNCRKWCRN 303
T L Y + KK+CRKWCRN
Sbjct: 697 TKLMYCVIKKKHCRKWCRN 715
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,726,548
Number of Sequences: 1657284
Number of extensions: 6556745
Number of successful extensions: 15563
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 14129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15313
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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