Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0923
         (581 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8D2C3 Cluster: UbiH protein; n=1; Wigglesworthia gloss...    33   4.9  
UniRef50_Q8I3X0 Cluster: Putative uncharacterized protein PFE068...    33   6.5  
UniRef50_UPI00015ADF49 Cluster: hypothetical protein NEMVEDRAFT_...    32   8.6  
UniRef50_UPI0000DC084B Cluster: UPI0000DC084B related cluster; n...    32   8.6  

>UniRef50_Q8D2C3 Cluster: UbiH protein; n=1; Wigglesworthia
           glossinidia endosymbiont of Glossina brevipalpis|Rep:
           UbiH protein - Wigglesworthia glossinidia brevipalpis
          Length = 395

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 14/26 (53%), Positives = 21/26 (80%)
 Frame = -1

Query: 308 FTVALRNLDRNKIKITLLQIN*YTNI 231
           F++AL NL +NKIKI L++IN  +N+
Sbjct: 15  FSLALSNLSKNKIKINLVEINDISNL 40


>UniRef50_Q8I3X0 Cluster: Putative uncharacterized protein PFE0685w;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           PFE0685w - Plasmodium falciparum (isolate 3D7)
          Length = 736

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
 Frame = -1

Query: 461 RIIEIHFRLNWFSYSAHLCVNVNIYYLANQKTRLFVECFLKQ*LYKFCS*NF--TVALRN 288
           +I++++   N+  Y+ H+  ++  Y+L N+K    +ECFL    Y + + NF  T  L N
Sbjct: 442 KIVKVYEYSNYSIYAFHINKDLESYFLFNKK----MECFLGDNFYIYLNINFINTYKLDN 497

Query: 287 -LDRNKIKITLLQIN 246
             D N  K+  L  N
Sbjct: 498 SFDNNNEKVVNLYPN 512


>UniRef50_UPI00015ADF49 Cluster: hypothetical protein
           NEMVEDRAFT_v1g49598; n=1; Nematostella vectensis|Rep:
           hypothetical protein NEMVEDRAFT_v1g49598 - Nematostella
           vectensis
          Length = 156

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +2

Query: 110 LSSCCLSTFVSNIKNMYSFTIKVIENECVISLVNMCHRY 226
           LS CC+  F+S + ++Y F +  +   C+I +  +CH Y
Sbjct: 105 LSVCCI-IFISLLYHIYQFAVSYLSVCCIIFISLLCHIY 142


>UniRef50_UPI0000DC084B Cluster: UPI0000DC084B related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DC084B UniRef100 entry -
           Rattus norvegicus
          Length = 342

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = -2

Query: 256 YKLINTLTYRITMAHVH*TNNTLILYHFYCKRIHIFYVTYEGT*TTR*KHSHVYAHTN 83
           ++LI+T T   T  H H   +T   + + C R H+   T+  T T    H+H + HT+
Sbjct: 144 HELIDTHTQTQTQTHTHTHTHT---HTWQCVRRHLKLATHTHTHTHTHTHTHTHTHTH 198


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,389,906
Number of Sequences: 1657284
Number of extensions: 6799709
Number of successful extensions: 11002
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10986
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)