Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0919
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 155 2e-38
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 155 2e-38
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 5e-38
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 154 5e-38
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 131 4e-31
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 127 5e-30
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 112 2e-25
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 59 3e-09
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 46 2e-05
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 42 4e-04
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 40 0.002
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.015
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.062
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 33 0.14
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 32 0.33
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 31 0.76
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 29 1.8
SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 29 3.1
SB_35739| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_49939| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_53258| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 28 5.4
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 28 5.4
SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27) 28 5.4
SB_4877| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5) 27 7.1
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 155 bits (377), Expect = 2e-38
Identities = 79/92 (85%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 155 bits (377), Expect = 2e-38
Identities = 79/92 (85%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 196
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 155 bits (377), Expect = 2e-38
Identities = 79/92 (85%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 272
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 155 bits (377), Expect = 2e-38
Identities = 79/92 (85%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 348
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 155 bits (377), Expect = 2e-38
Identities = 79/92 (85%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 424
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 425 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 155 bits (377), Expect = 2e-38
Identities = 79/92 (85%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 500
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 501 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 155 bits (377), Expect = 2e-38
Identities = 79/92 (85%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 155 bits (377), Expect = 2e-38
Identities = 79/92 (85%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 196
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 155 bits (377), Expect = 2e-38
Identities = 79/92 (85%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 272
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 273 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 155 bits (377), Expect = 2e-38
Identities = 79/92 (85%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 348
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 349 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 85.4 bits (202), Expect = 3e-17
Identities = 46/87 (52%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQI VK KT TL+VEASDT+E+VK KIQ++EGIPP QRL+
Sbjct: 61 IQKESTLHLVLRLRGGMQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLL 119
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVL 258
+ ++L D R+L+DYNI++ S LHL L
Sbjct: 120 YEEEELVDNRSLADYNIKQGSILHLFL 146
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 131 bits (316), Expect = 4e-31
Identities = 63/66 (95%), Positives = 65/66 (98%)
Frame = +1
Query: 37 SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 216
++TMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 76 TSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 135
Query: 217 DYNIQK 234
DYNIQK
Sbjct: 136 DYNIQK 141
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 127 bits (307), Expect = 5e-30
Identities = 59/62 (95%), Positives = 60/62 (96%)
Frame = +1
Query: 151 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMI 330
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG IEPSLRILA KYNC+KMI
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVIEPSLRILAQKYNCDKMI 61
Query: 331 CR 336
CR
Sbjct: 62 CR 63
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 112 bits (269), Expect = 2e-25
Identities = 49/54 (90%), Positives = 50/54 (92%)
Frame = +1
Query: 235 ESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCTH 396
ESTLHLVLRLRGG IEPSLRILA KYNC+KMICRKCYARLHPRATNCRK KC H
Sbjct: 14 ESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICRKCYARLHPRATNCRKKKCGH 67
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +1
Query: 235 ESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICR 336
ESTLHLVLRLRGG IEPSLRILA KYNC+KMICR
Sbjct: 14 ESTLHLVLRLRGGVIEPSLRILAQKYNCDKMICR 47
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 58.8 bits (136), Expect = 3e-09
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 52 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 228
I V TLTG+ I + ++ TI VK I+ K G P DQQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 229 QKESTLHLVLRLRGGTIEPSLRI 297
+TLHL++RL GG P+ R+
Sbjct: 133 FAGATLHLIVRLLGGEC-PTYRL 154
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +1
Query: 34 RSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQ---DKEGIPPDQQRLIFAGKQLEDG 204
+S M I KTL +T +E+ +T+ +K KI+ K+ P +LI+AGK L D
Sbjct: 63 KSVNMIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDD 122
Query: 205 RTLSDYNIQKES 240
L +YNI ++S
Sbjct: 123 NPLKEYNIDEKS 134
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 41.5 bits (93), Expect = 4e-04
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 43 TMQIFVKTLTGKTITLEVEASDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 219
T Q+F T TL +D + +K++I+ K GIP D QRL F K+L D TL+
Sbjct: 5 TFQVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAK 64
Query: 220 YNIQK 234
N+++
Sbjct: 65 VNLKQ 69
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 222
M++ V G TL+V +EN +A ++ + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 223 NIQKESTLHLVLR 261
++++ + +V R
Sbjct: 61 SVKENDVILMVRR 73
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 36.7 bits (81), Expect = 0.012
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +1
Query: 70 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 249
+G L++ + TIE ++ ++ DK G PP QR I K + +L +++
Sbjct: 44 SGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRWIIGKKMAKPNESLLQCKVRETGFTA 103
Query: 250 LVLRLRGGTIE 282
+ L G +E
Sbjct: 104 YLYLLSGRNVE 114
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 36.3 bits (80), Expect = 0.015
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQ+ VKTL +T T V +EGIP ++QRLIF GK L+D + L +++
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 34.3 bits (75), Expect = 0.062
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 147
M ++++TLTG L V +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 148 GIPPDQQRLIFAGKQLEDGRTLSDYN 225
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 31.9 bits (69), Expect = 0.33
Identities = 16/64 (25%), Positives = 35/64 (54%)
Frame = +1
Query: 52 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 231
+ ++T G T+ +E+ ++E++KA+ + + GIP + RL LED + +
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICERGHL 244
Query: 232 KEST 243
+++T
Sbjct: 245 QKAT 248
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 31.1 bits (67), Expect = 0.58
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 109 TIENVKAKIQDKEGIPPDQQRLIFA-GKQLEDGRTLSDYNIQKESTLHL 252
T+ ++K + +K G+ RL+ GK++ D L DYNI T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 30.7 bits (66), Expect = 0.76
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +1
Query: 55 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 234
FV G+ ITL + ++ + G P + ++ K LED T++D + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 235 ESTLHLVLR 261
+TL + L+
Sbjct: 229 GATLQIELQ 237
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +1
Query: 58 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--NIQ 231
+K G+ ++ + +D ENV I+ PD ++ I G L+DG+T+ D + +
Sbjct: 510 LKGKLGRNLSRCILGNDETENV-GNIESS----PDSKKNILEGLDLQDGKTVEDLLSDYR 564
Query: 232 KESTLHLVLRLRGGTI 279
+E L+ ++ GT+
Sbjct: 565 RELELYRQIKDENGTV 580
>SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 73 GKTITLEVE-ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 201
G T E+E A +++E + I GIP D+Q L+ G + D
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICGGEALD 53
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 361 EDEDGHSIYGKSFSHSYTSWRECEGKV 281
++E I SFS T WR CEG++
Sbjct: 775 DEEMNQVIISSSFSAKLTKWRVCEGQI 801
>SB_35739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/82 (21%), Positives = 39/82 (47%)
Frame = +1
Query: 67 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 246
L ++ + D +V +I+D G + + G + D + +++ + L
Sbjct: 237 LRSPSVDATLRGQDISASVYQEIRDLGGTGVIALKPVMRGPDINDDGSHERESLRANAVL 296
Query: 247 HLVLRLRGGTIEPSLRILAMKY 312
LVLR++GG + +R LA+++
Sbjct: 297 PLVLRMKGGE-DSQVRDLAVRF 317
>SB_49939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 170 VSSLPGNN*KMAALFQTITSRKNPHFTWF 256
+ ++ N K+AA+ I+S NP FTWF
Sbjct: 8 IGAIASNAEKVAAVAGAISSLDNPGFTWF 36
>SB_53258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 811
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 49 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYN 225
+I V+ TGK+I + E I++ K+Q + + Q F G ++ + RTL+ +
Sbjct: 439 KILVRGKTGKSIVDDKEMDKEIDSFDRKVQIERSV----QETDFRGSKVSNNNRTLAGQD 494
Query: 226 IQKESTLHLVLRLRGGTIEP 285
K HL + G + P
Sbjct: 495 TPKSLDDHLSVASLGQKLSP 514
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +1
Query: 67 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 198
L G +IT+ +E D +EN++ +K+ +PP ++L+F + L+
Sbjct: 102 LGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTLQ 143
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/62 (22%), Positives = 35/62 (56%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+Q ++T GKTI L E + ++ + ++K+G+ + ++L + ++L+ T ++
Sbjct: 714 LQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDTEEK 773
Query: 226 IQ 231
+Q
Sbjct: 774 LQ 775
>SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27)
Length = 2056
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -3
Query: 129 SFDIFDSVGSFHLQCNGLPRKGFDEYLHCVAPMKN 25
S DIF+++ +FH Q D+ + C+ P+++
Sbjct: 476 STDIFETLSNFHSQIGPKKTSNADDGITCIVPLQS 510
>SB_4877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -3
Query: 129 SFDIFDSVGSFHLQCNGLPRKGFDEYLHCVAPMKN 25
S DIF+++ +FH Q D+ + C+ P+++
Sbjct: 457 STDIFETLSNFHSQIGPKKTSNADDGITCIVPLQS 491
>SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1230
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +3
Query: 42 HNANIRQNPYGEDHYI--GGGSFRHY 113
HNA I++N G D+Y+ GGG + Y
Sbjct: 187 HNAPIKRNCSGNDYYVKAGGGVYFEY 212
>SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5)
Length = 106
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/62 (22%), Positives = 34/62 (54%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+Q ++T GKTI L E + ++ + ++K+G+ + + L + ++L+ T ++
Sbjct: 10 LQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLVAEVEHLQKSSEELQQQLTDTEEK 69
Query: 226 IQ 231
+Q
Sbjct: 70 LQ 71
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,826,766
Number of Sequences: 59808
Number of extensions: 362565
Number of successful extensions: 920
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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