Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0919
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 223 4e-59
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 223 4e-59
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 155 2e-38
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 155 2e-38
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 154 3e-38
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 154 3e-38
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 154 3e-38
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 154 3e-38
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 154 4e-38
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 154 4e-38
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 154 4e-38
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 154 4e-38
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 154 4e-38
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 154 4e-38
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 154 4e-38
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 154 4e-38
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 154 4e-38
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 152 1e-37
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 152 1e-37
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 152 1e-37
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 152 1e-37
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 151 4e-37
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 140 5e-34
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 117 4e-27
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 95 2e-20
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 69 1e-12
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 69 1e-12
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 64 5e-11
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 58 4e-09
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 58 4e-09
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 54 4e-08
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 53 1e-07
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 52 3e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 51 4e-07
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 51 5e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 51 5e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 51 5e-07
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 50 1e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 50 1e-06
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 49 2e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 48 4e-06
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 47 7e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 47 7e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 47 7e-06
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 46 1e-05
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 46 2e-05
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 46 2e-05
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 46 2e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 46 2e-05
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 46 2e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 46 2e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 44 6e-05
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 8e-04
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 40 8e-04
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 40 0.001
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 40 0.001
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 39 0.002
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.007
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.007
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 37 0.007
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 36 0.012
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 35 0.029
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 34 0.050
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 33 0.12
At4g14940.1 68417.m02294 copper amine oxidase, putative highly s... 31 0.47
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 0.82
At1g47680.1 68414.m05297 hypothetical protein 29 2.5
At1g44790.1 68414.m05131 ChaC-like family protein contains Pfam ... 28 3.3
At4g38340.1 68417.m05420 RWP-RK domain-containing protein simila... 28 4.4
At3g47160.1 68416.m05120 expressed protein similar to MTD2 [Medi... 27 5.8
At3g46530.1 68416.m05051 disease resistance protein, RPP13-like ... 27 5.8
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 27 5.8
At2g19180.1 68415.m02238 expressed protein 27 5.8
At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR ... 27 5.8
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 27 7.7
At1g74750.1 68414.m08661 pentatricopeptide (PPR) repeat-containi... 27 7.7
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 223 bits (546), Expect = 4e-59
Identities = 105/117 (89%), Positives = 110/117 (94%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCTH 396
IQKESTLHLVLRLRGG IEPSL +LA KYN +KMICRKCYARLHPRA NCRK KC H
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGH 117
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 223 bits (546), Expect = 4e-59
Identities = 105/117 (89%), Positives = 110/117 (94%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCTH 396
IQKESTLHLVLRLRGG IEPSL +LA KYN +KMICRKCYARLHPRA NCRK KC H
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGH 117
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 155 bits (375), Expect = 2e-38
Identities = 74/78 (94%), Positives = 78/78 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGGTI 279
IQKESTLHLVLRLRGGT+
Sbjct: 61 IQKESTLHLVLRLRGGTM 78
Score = 100 bits (239), Expect = 7e-22
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = +1
Query: 34 RSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 213
R TM I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 74 RGGTM-IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTA 132
Query: 214 SDYNIQKESTLHLVLRLRGGTI 279
DY I+ S LHLVL LRGG +
Sbjct: 133 KDYAIEGGSVLHLVLALRGGLL 154
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 155 bits (375), Expect = 2e-38
Identities = 74/78 (94%), Positives = 78/78 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGGTI 279
IQKESTLHLVLRLRGGT+
Sbjct: 61 IQKESTLHLVLRLRGGTM 78
Score = 103 bits (246), Expect = 1e-22
Identities = 49/80 (61%), Positives = 62/80 (77%)
Frame = +1
Query: 34 RSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 213
R TM I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T
Sbjct: 74 RGGTM-IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTA 132
Query: 214 SDYNIQKESTLHLVLRLRGG 273
DYNI+ S LHLVL LRGG
Sbjct: 133 KDYNIEGGSVLHLVLALRGG 152
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 154 bits (374), Expect = 3e-38
Identities = 77/93 (82%), Positives = 84/93 (90%), Gaps = 1/93 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 348
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGT 276
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 349 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGS 381
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 154 bits (374), Expect = 3e-38
Identities = 77/93 (82%), Positives = 84/93 (90%), Gaps = 1/93 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGT 276
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGS 305
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 154 bits (374), Expect = 3e-38
Identities = 77/93 (82%), Positives = 84/93 (90%), Gaps = 1/93 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGT 276
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGS 305
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 154 bits (374), Expect = 3e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+QE T H+ R MQIFVKTLTGKTITLEVE+SDTI+N+KAKIQDKEGIPPDQQRLI
Sbjct: 61 VQEDSTLHLLLRFRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLI 120
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 148 bits (359), Expect = 2e-36
Identities = 75/93 (80%), Positives = 82/93 (88%), Gaps = 1/93 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGI PDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLI 196
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGT 276
FAGKQ EDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 197 FAGKQHEDGRTLADYNIQKESTLHLVLRLRGGS 229
Score = 135 bits (326), Expect = 2e-32
Identities = 63/76 (82%), Positives = 71/76 (93%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIF+KTLTGKT LEVE+SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGG 273
+Q++STLHL+LR RGG
Sbjct: 61 VQEDSTLHLLLRFRGG 76
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 68.9 bits (161), Expect = 2e-12
Identities = 36/50 (72%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 147
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 149 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 253
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 263 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 297
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 348
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 349 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 68.9 bits (161), Expect = 2e-12
Identities = 36/50 (72%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 147
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 149 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 253
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 415 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 449
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 68.9 bits (161), Expect = 2e-12
Identities = 36/50 (72%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 147
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 149 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 253
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 339 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 373
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 348
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 349 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 68.9 bits (161), Expect = 2e-12
Identities = 36/50 (72%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 147
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 149 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 253
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 415 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 449
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 68.9 bits (161), Expect = 2e-12
Identities = 36/50 (72%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 147
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 149 VFLQTNNVSSLPGNN*KMAALFQTITSRKNPHFTW 253
VFL+T++VSS ++ +M L+ T TSR++ FTW
Sbjct: 339 VFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTW 373
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 154 bits (373), Expect = 4e-38
Identities = 77/92 (83%), Positives = 83/92 (90%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 151 bits (365), Expect = 4e-37
Identities = 76/92 (82%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE IPPDQQRLI
Sbjct: 136 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLI 195
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 196 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 227
Score = 146 bits (355), Expect = 6e-36
Identities = 76/92 (82%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+D NIQKESTLHLVLRLRGG
Sbjct: 121 FAGKQLEDGRTLAD-NIQKESTLHLVLRLRGG 151
Score = 103 bits (247), Expect = 7e-23
Identities = 53/69 (76%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFVKTLTGKTITLEVE+S TI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 212 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLI 271
Query: 178 FAGKQLEDG 204
FAGKQLE G
Sbjct: 272 FAGKQLEGG 280
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 151 bits (365), Expect = 4e-37
Identities = 71/76 (93%), Positives = 76/76 (100%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 226 IQKESTLHLVLRLRGG 273
IQKESTLHLVLRLRGG
Sbjct: 139 IQKESTLHLVLRLRGG 154
Score = 142 bits (344), Expect = 1e-34
Identities = 72/92 (78%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFV+TLT KTI LEVE+SDT +NVKAKIQDKEGIPPDQQRLI
Sbjct: 139 IQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLI 198
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRL GG
Sbjct: 199 FAGKQLEDGRTLADYNIQKESTLHLVLRLCGG 230
Score = 136 bits (330), Expect = 6e-33
Identities = 72/93 (77%), Positives = 79/93 (84%), Gaps = 2/93 (2%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKE I PDQQRLI
Sbjct: 215 IQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLI 274
Query: 178 FAGKQLEDG-RTLSDYNIQKESTLHLVLRLRGG 273
FAG+QLEDG TL+DYNIQKESTLHLVLRLRGG
Sbjct: 275 FAGEQLEDGYYTLADYNIQKESTLHLVLRLRGG 307
Score = 120 bits (288), Expect = 8e-28
Identities = 58/77 (75%), Positives = 67/77 (87%)
Frame = +1
Query: 43 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 222
+MQI KTLT KTIT++V +SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY
Sbjct: 2 SMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADY 61
Query: 223 NIQKESTLHLVLRLRGG 273
+IQK+S LHL LRLRGG
Sbjct: 62 SIQKDSILHLALRLRGG 78
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 140 bits (339), Expect = 5e-34
Identities = 72/92 (78%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H+ R MQIFV+TLTGKTITLEV++SDTI+NVKAKIQDKEGI P QQRLI
Sbjct: 63 IQKESTLHLVLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLI 122
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
FAGKQLEDGRTL+DYNIQKESTLHLVLRL GG
Sbjct: 123 FAGKQLEDGRTLADYNIQKESTLHLVLRLCGG 154
Score = 134 bits (323), Expect = 4e-32
Identities = 65/77 (84%), Positives = 71/77 (92%)
Frame = +1
Query: 43 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 222
T+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DY
Sbjct: 2 TIQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADY 61
Query: 223 NIQKESTLHLVLRLRGG 273
NIQKESTLHLVLRLRGG
Sbjct: 62 NIQKESTLHLVLRLRGG 78
Score = 119 bits (286), Expect = 1e-27
Identities = 62/90 (68%), Positives = 72/90 (80%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 LQEFGTRH-VFHRSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 177
+Q+ T H +F + MQIF+KTLTGKTI LEVE+SDTI NVK KIQ KEGI PDQQ LI
Sbjct: 536 IQKGSTIHQLFLQRGGMQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLI 595
Query: 178 FAGKQLEDGRTLSDYNIQKESTLHLVLRLR 267
F G+QLEDG TL DY+I K+STL+LVLRLR
Sbjct: 596 FFGQQLEDGVTLGDYDIHKKSTLYLVLRLR 625
Score = 108 bits (260), Expect = 2e-24
Identities = 53/76 (69%), Positives = 60/76 (78%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
MQIFVK GK ITLEV +SDTI++VKAKIQDK G PPDQQ L+F G QL+DGRTL DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 226 IQKESTLHLVLRLRGG 273
I+ ESTLHL +R G
Sbjct: 453 IRNESTLHLFFHIRHG 468
Score = 107 bits (256), Expect = 6e-24
Identities = 55/76 (72%), Positives = 64/76 (84%), Gaps = 2/76 (2%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI--PPDQQRLIFAGKQLEDGRTLSD 219
MQIFVKTLT K I LEVE+ DTIENVKA +QDKEGI P+ QRLIF GK+L+DG TL+D
Sbjct: 319 MQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLAD 378
Query: 220 YNIQKESTLHLVLRLR 267
Y+IQKESTLHLVL ++
Sbjct: 379 YSIQKESTLHLVLGMQ 394
Score = 103 bits (246), Expect = 1e-22
Identities = 58/98 (59%), Positives = 71/98 (72%), Gaps = 8/98 (8%)
Frame = +1
Query: 1 LQEFGTRHVFHR-SNTMQIFVKTLTGK-----TITLEVEASDTIENVKAKIQDKEGIPPD 162
+Q+ T H+ R MQIFV T +GK T+TL+VE+SDTIENVKAKIQD+EG+ PD
Sbjct: 139 IQKESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPD 198
Query: 163 QQRLIFAGKQL--EDGRTLSDYNIQKESTLHLVLRLRG 270
QRLIF G++L ED RTL+DY I+ STL L LRLRG
Sbjct: 199 HQRLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRG 236
Score = 100 bits (239), Expect = 7e-22
Identities = 57/94 (60%), Positives = 65/94 (69%), Gaps = 8/94 (8%)
Frame = +1
Query: 16 TRHVF-HRSNTMQIFVKTL-------TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 171
T H+F H + MQIFVKT T KTITLEVE+SDTI+NVK KIQ K GIP D+QR
Sbjct: 458 TLHLFFHIRHGMQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQR 517
Query: 172 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 273
LIF G+ L RTL DYNIQK ST+H + RGG
Sbjct: 518 LIFGGRVLVGSRTLLDYNIQKGSTIHQLFLQRGG 551
Score = 99 bits (238), Expect = 9e-22
Identities = 54/81 (66%), Positives = 60/81 (74%), Gaps = 5/81 (6%)
Frame = +1
Query: 46 MQIFVKTL-----TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 210
M IFVK L TG+ LEVE+SDTI+NVKAK+QDKE IP D RLIFAGK LE GRT
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297
Query: 211 LSDYNIQKESTLHLVLRLRGG 273
L+ YNIQK STL+LV R R G
Sbjct: 298 LAHYNIQKGSTLYLVTRFRCG 318
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 117 bits (282), Expect = 4e-27
Identities = 56/77 (72%), Positives = 63/77 (81%)
Frame = +1
Query: 34 RSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 213
R M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP DQQRLIF GKQLEDG TL
Sbjct: 82 RHEVMFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTL 141
Query: 214 SDYNIQKESTLHLVLRL 264
+DYNIQ +S LHL+ RL
Sbjct: 142 ADYNIQNDSILHLIKRL 158
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 95.5 bits (227), Expect = 2e-20
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 226 IQKESTLHLVLRLRGG 273
+++ S LHLVL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 69.3 bits (162), Expect = 1e-12
Identities = 30/74 (40%), Positives = 50/74 (67%)
Frame = +1
Query: 40 NTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 219
+T+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+
Sbjct: 22 STLELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSE 81
Query: 220 YNIQKESTLHLVLR 261
Y+++ TLHL++R
Sbjct: 82 YHLENGHTLHLIVR 95
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 69.3 bits (162), Expect = 1e-12
Identities = 41/86 (47%), Positives = 51/86 (59%), Gaps = 13/86 (15%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK------------ 189
M IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP +QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSIN 109
Query: 190 -QLEDGRTLSDYNIQKESTLHLVLRL 264
++ D D I E T LVLRL
Sbjct: 110 LEVADSSDTIDLKINGEPTRQLVLRL 135
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P DQQ L G +L++ T+SDYN
Sbjct: 141 MRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYN 200
Query: 226 IQKESTL 246
I+ ++ L
Sbjct: 201 IKPDANL 207
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVE-ASDTIE 117
M I +KTL GK I LEVE +S+TI+
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTID 25
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 64.1 bits (149), Expect = 5e-11
Identities = 31/78 (39%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +1
Query: 37 SNTMQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 213
S +QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L
Sbjct: 92 STRLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSL 151
Query: 214 SDYNIQKESTLHLVLRLR 267
+ Y+I+++++L LV R++
Sbjct: 152 TYYSIEQDASLQLVARMQ 169
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 58.0 bits (134), Expect = 4e-09
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +1
Query: 40 NTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 216
+T+ I++ TL G I + V SD+IE+VK +IQ G Q+L+F G++L +
Sbjct: 33 DTIMIYL-TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMR 91
Query: 217 DYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICR 336
DY + + + LHLVL+L L++L +K C K CR
Sbjct: 92 DYGVSEGNILHLVLKL------SDLQVLDVKTTCGKH-CR 124
Score = 50.8 bits (116), Expect = 5e-07
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +1
Query: 22 HVFHRSNTMQIF-VKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQ 192
H+ + + +Q+ VKT GK VE I VK +I K G + PD+Q +++ G++
Sbjct: 102 HLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEK 161
Query: 193 LEDGRTLSDYNIQKESTLHLVLR 261
LED ++D +S LHL++R
Sbjct: 162 LEDQSLINDICRNDDSVLHLLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 58.0 bits (134), Expect = 4e-09
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +1
Query: 40 NTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLS 216
+T+ I++ TL G I + V SD+IE+VK +IQ G Q+L+F G++L +
Sbjct: 33 DTIMIYL-TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMR 91
Query: 217 DYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICR 336
DY + + + LHLVL+L L++L +K C K CR
Sbjct: 92 DYGVSEGNILHLVLKL------SDLQVLDVKTTCGKH-CR 124
Score = 50.8 bits (116), Expect = 5e-07
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +1
Query: 22 HVFHRSNTMQIF-VKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQ 192
H+ + + +Q+ VKT GK VE I VK +I K G + PD+Q +++ G++
Sbjct: 102 HLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEK 161
Query: 193 LEDGRTLSDYNIQKESTLHLVLR 261
LED ++D +S LHL++R
Sbjct: 162 LEDQSLINDICRNDDSVLHLLVR 184
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 54.4 bits (125), Expect = 4e-08
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +1
Query: 37 SNTMQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 213
S +Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ DG +
Sbjct: 6 SKPLQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAI 65
Query: 214 SDYNIQKESTLHLVLRLRGG 273
S Q ++T++LVL LRGG
Sbjct: 66 S----QPDATVNLVLSLRGG 81
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 219
M+IFVKTL+G +EV+ +D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 220 YNIQKESTLHLVL 258
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 51.6 bits (118), Expect = 3e-07
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +1
Query: 10 FGTRHVFHRSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 189
FG H S + +++G T+ + + SD+I VK +IQ G +Q+L+F+G+
Sbjct: 22 FGQSTTTHYSVKSVLVFLSVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGR 81
Query: 190 QL-EDGRTLSDYNIQKESTLHLVLRL 264
+L + + DY + S LHLVL+L
Sbjct: 82 ELARNASRVKDYGVTGGSVLHLVLKL 107
Score = 35.1 bits (77), Expect = 0.029
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 IFVKTLTGKTITLEVEASDTIENVKAKI-QDKEGIPP-DQQRLIFAGKQLEDGRTLSDYN 225
+ V T GK V+ + +K +I ++ +G P D Q ++F G++L+D R +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 226 IQKESTLHLVLR 261
S +HL+++
Sbjct: 173 KDGNSVIHLLVK 184
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 51.2 bits (117), Expect = 4e-07
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +1
Query: 58 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 237
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 238 STLHLV 255
T+H+V
Sbjct: 82 HTIHMV 87
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 50.8 bits (116), Expect = 5e-07
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 216
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 217 DYNIQKESTLHLVLRLRGG 273
DY I+ H+ R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 50.8 bits (116), Expect = 5e-07
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 226 IQKESTLHL 252
I ES L L
Sbjct: 61 ILFESRLLL 69
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 50.8 bits (116), Expect = 5e-07
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +1
Query: 58 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 237
V+ G ++ T+E+ K I +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 238 STLHLV 255
T+H+V
Sbjct: 82 HTVHMV 87
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 49.6 bits (113), Expect = 1e-06
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +1
Query: 13 GTRHVFHRSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGK 189
G H F ++ ++I +K L T TL VE + + ++K I G+ P++Q RL+F G+
Sbjct: 2 GDTHDF--TDLIRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGR 59
Query: 190 QLEDGRTLSDYNIQKESTLHLV 255
L++ + LSDY++++ TL+LV
Sbjct: 60 VLKNDQRLSDYHVEEGHTLYLV 81
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/71 (30%), Positives = 45/71 (63%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
M+I V T + ITL+V++ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 226 IQKESTLHLVL 258
++ + L +++
Sbjct: 61 VKDDDLLMMMV 71
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 48.8 bits (111), Expect = 2e-06
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 222
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 223 NIQKESTLHLVLRLRGGT--IEPSLRILAMKYNCEK 324
Q ++T++LVL LRGG + LR + MK +K
Sbjct: 67 --QSDTTMNLVLSLRGGKGGLGSLLRNVVMKAGQKK 100
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 48.0 bits (109), Expect = 4e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 226 IQKESTL 246
I ES L
Sbjct: 61 ILFESLL 67
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 47.2 bits (107), Expect = 7e-06
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
M++ V+ +G T ++++ DT+ K KI+ + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 226 IQKESTLHL 252
I + LHL
Sbjct: 61 ILQNPLLHL 69
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 47.2 bits (107), Expect = 7e-06
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 216
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 217 DYNIQKESTLHLVL 258
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 47.2 bits (107), Expect = 7e-06
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 216
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 217 DYNIQKESTLHLVL 258
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 46.4 bits (105), Expect = 1e-05
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +1
Query: 19 RHVFHRSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 198
R F+ + + +F+ T+ G I V SD+I +VK +IQ +G +Q+L++ G+++
Sbjct: 24 RFGFNLDDPILVFL-TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVS 82
Query: 199 -DGRTLSDYNIQKESTLHLVLRL 264
+ + DY + LHLV+RL
Sbjct: 83 RNDSQIRDYGLADGKLLHLVIRL 105
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +1
Query: 25 VFHRSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE---GIPPDQQRLIFAGKQL 195
V S+ I V+T+ GK L VE S + VK +I KE GIP D + L G++L
Sbjct: 102 VIRLSDLQAISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEEL 160
Query: 196 EDGRTLSDYNIQKESTLHLVL 258
+D R ++D ++ +HL++
Sbjct: 161 DDQRLITDLCQNGDNVIHLLI 181
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 216
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 217 DYNIQKESTLHLVL 258
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 216
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 217 DYNIQKESTLHLVL 258
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 216
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 217 DYNIQKESTLHLVL 258
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 43 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 219
+M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L+
Sbjct: 660 SMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAA 719
Query: 220 YNIQKESTLHLV 255
N+Q S +HL+
Sbjct: 720 QNVQPNSLVHLI 731
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 216
M++ VKTL G + V +DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 217 DYNIQKESTLHLVL 258
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +1
Query: 43 TMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 219
TM+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 499 TMKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAE 558
Query: 220 YNIQKESTLHLV 255
N+Q S +HL+
Sbjct: 559 QNVQPNSLVHLL 570
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 44.0 bits (99), Expect = 6e-05
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 226 IQKESTLHL 252
I S + L
Sbjct: 61 ILNHSRIQL 69
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 40.3 bits (90), Expect = 8e-04
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 226 IQKESTLHL 252
I+ S + L
Sbjct: 62 IRHNSRILL 70
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 40.3 bits (90), Expect = 8e-04
Identities = 23/72 (31%), Positives = 42/72 (58%)
Frame = +1
Query: 40 NTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 219
+T+++ VK GK+I L V T++++K+++Q + P Q+LIF GK L + TL
Sbjct: 534 STIKLTVK-FGGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQ 592
Query: 220 YNIQKESTLHLV 255
++ + L L+
Sbjct: 593 SDVGSGAKLMLM 604
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 225
+ + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 226 IQKESTLHL 252
I+ S + L
Sbjct: 96 IRHNSRILL 104
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPP 159
M IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVE-ASDTIE 117
M+I +KT GKTI LE+E +S+TI+
Sbjct: 1 MKILIKTEKGKTINLELEDSSETID 25
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 201
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 37.1 bits (82), Expect = 0.007
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 186
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 37.1 bits (82), Expect = 0.007
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 46 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 186
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 37.1 bits (82), Expect = 0.007
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +1
Query: 73 GKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 249
G+ + + V++ S+ + ++K KI + IP ++Q+L L+D +L+ YN+ L
Sbjct: 715 GQFMEITVQSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILT 774
Query: 250 LVLRLRGG 273
L LR RGG
Sbjct: 775 LSLRERGG 782
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 36.3 bits (80), Expect = 0.012
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 88 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 201
L +EA+ T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 35.1 bits (77), Expect = 0.029
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 49 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 210
++FV+T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 42 RVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 34.3 bits (75), Expect = 0.050
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 58 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 201
V T++ + + ++A+ T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 33.1 bits (72), Expect = 0.12
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +1
Query: 88 LEVEASD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTL 246
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At4g14940.1 68417.m02294 copper amine oxidase, putative highly
similar to copper amine oxidase [Arabidopsis thaliana]
gi|2654118|gb|AAB87690
Length = 650
Score = 31.1 bits (67), Expect = 0.47
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +1
Query: 28 FHRSNTMQIFVKTLTGKTITLEVEASDTI---ENVKAKIQDKEG 150
F+R ++ +F + + G T+T++V++ I + + I DKEG
Sbjct: 177 FYRDGSVNVFTRPIEGITVTIDVDSMQVIKYSDRFRKPIPDKEG 220
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 30.3 bits (65), Expect = 0.82
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Frame = +1
Query: 103 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KEST 243
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 244 LHLVLRL 264
+H+VLRL
Sbjct: 88 MHIVLRL 94
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 97 EASDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 252
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At1g44790.1 68414.m05131 ChaC-like family protein contains Pfam
profile: PF04752 ChaC-like protein
Length = 199
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +1
Query: 13 GTRHVFHRSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 147
G R VFH+ +T G+T+TLE + V KI +E
Sbjct: 29 GYRRVFHQGSTDHRGTPDFPGRTVTLEAAHEEVCCGVAYKITKEE 73
>At4g38340.1 68417.m05420 RWP-RK domain-containing protein similar
to nodule inception protein GI:6448579 from (Lotus
japonicus); contains Pfam profile: PF02042 RWP-RK domain
Length = 767
Score = 27.9 bits (59), Expect = 4.4
Identities = 20/85 (23%), Positives = 40/85 (47%)
Frame = +1
Query: 73 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 252
GK ++ ++ ++EN K K + ++ I D R FAG + + + +TL
Sbjct: 473 GKQVSFSFSSASSLENRKRKTKAEKDITLDTLRQHFAGSLKDAAKNIG----VCPTTLKR 528
Query: 253 VLRLRGGTIEPSLRILAMKYNCEKM 327
+ R G + PS +I + ++ K+
Sbjct: 529 ICRQNGISRWPSRKIKKVGHSLRKL 553
>At3g47160.1 68416.m05120 expressed protein similar to MTD2
[Medicago truncatula] GI:9294812; supporting cDNA
gi|25083983|gb|BT002136.1|
Length = 245
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +1
Query: 211 LSDYNIQKESTLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNC 375
LS+ +I++E + + + + P NC +C KCY H R+ +C
Sbjct: 136 LSEIDIEREEECGICMEMNNMVVLP---------NCTHSLCIKCYRDWHGRSESC 181
>At3g46530.1 68416.m05051 disease resistance protein, RPP13-like
(CC-NBS class), putative domain signature CC-NBS exists,
suggestive of a disease resistance protein. Closest
homolog in Col-0 to RPP13.
Length = 835
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -3
Query: 180 KDETLLVWRNTFLVLDFSFDIFDSVGSFHLQ 88
+DE W LVLDF++D+ D + ++HL+
Sbjct: 54 EDEVSKEWSK--LVLDFAYDVEDVLDTYHLK 82
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 27.5 bits (58), Expect = 5.8
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = +1
Query: 100 ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTI 279
A +TIE++K +++D+E +++ A Q E + KE L L+ +L +
Sbjct: 154 AEETIESLKNQLKDRERALVLKEKDFEAKLQHEQEERKKEVEKAKEEQLSLINQL--NSA 211
Query: 280 EPSLRILAMKYNCEKMICRK 339
+ + L + + EK +C K
Sbjct: 212 KDLVTELGRELSSEKKLCEK 231
>At2g19180.1 68415.m02238 expressed protein
Length = 179
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 461 YNKFPIWLLFNP*SSFWV 408
+N P WL F P SSFWV
Sbjct: 73 HNSTPDWLPFAPGSSFWV 90
>At1g51480.1 68414.m05794 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 941
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 180 CRETIRRWPHSFRL*HPERIHTSPGFE 260
C+ETI+ W H+ + + H PG E
Sbjct: 447 CKETIQEWHHAINVLNSPAGHKFPGME 473
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 67 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 204
+TG T E DTI K ++ G P + ++F+G DG
Sbjct: 323 VTGMRTTKEARIGDTIYRTKTTVEPLPGFKP-VRHMVFSGVYPADG 367
>At1g74750.1 68414.m08661 pentatricopeptide (PPR) repeat-containing
protein low similarity to post-transcriptional control
of chloroplast gene expression CRP1 [Zea mays]
GI:3289002; contains Pfam profile PF01535: PPR repeat
Length = 855
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/90 (20%), Positives = 43/90 (47%)
Frame = +1
Query: 103 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIE 282
+D++ + A I++ G+P Q + +++Y I +V + ++
Sbjct: 106 ADSVNHASAIIKEDVGVPIGDQIFKAGIGNVNLLSDIANYKIPLSDGTEVVGLPKSCMVD 165
Query: 283 PSLRILAMKYNCEKMICRKCYARLHPRATN 372
P+ I +K + K+I R+ A+++PR+ +
Sbjct: 166 PTRPISGVKSSNVKVIRREHLAKVYPRSAD 195
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,692,396
Number of Sequences: 28952
Number of extensions: 244560
Number of successful extensions: 828
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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