Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0916
         (306 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   1.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   1.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        20   5.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    20   6.7  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 87  PKLLDRFEKFY 119
           P+LLDR++ FY
Sbjct: 40  PELLDRYDNFY 50


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 87  PKLLDRFEKFY 119
           P+LLDR++ FY
Sbjct: 40  PELLDRYDNFY 50


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.2 bits (40), Expect = 5.1
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 99  PVVSEPIRNKQ 67
           PVVSEPI +K+
Sbjct: 226 PVVSEPIYDKK 236


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 8   NSARGKNIYTNIIKRKD 58
           N +  K  + N+IKRKD
Sbjct: 69  NVSPSKTKFFNLIKRKD 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,161
Number of Sequences: 336
Number of extensions: 669
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5518292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)