Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0914
         (501 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1283 - 28957729-28959258,28959354-28959550,28959824-289600...    29   2.1  
10_01_0055 - 785172-785997,786859-787394,787478-787695,787789-78...    27   8.5  

>06_03_1283 -
           28957729-28959258,28959354-28959550,28959824-28960026,
           28960097-28960424,28960524-28960661,28960765-28961020,
           28961529-28961626,28963104-28963367,28964395-28964584
          Length = 1067

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -2

Query: 323 FPFPIIVLKGLKAIVCRLCHFWCNPYQWVFLILDKSSL 210
           +P P ++L GL  +V    HFW +P +W  L+   + L
Sbjct: 90  WPSPYVLLCGLLLVVSLFEHFW-HPLKWFALVAAAAGL 126


>10_01_0055 -
           785172-785997,786859-787394,787478-787695,787789-787891,
           788723-788770
          Length = 576

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +2

Query: 182 IVFLICVYLLVKTYPILKIPIDTDYTKSDRG 274
           I+ ++ V +LV  Y I+ +P+   +T  D+G
Sbjct: 386 IIAVLSVLVLVPVYEIISVPLVKHFTGQDKG 416


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,007,571
Number of Sequences: 37544
Number of extensions: 245325
Number of successful extensions: 412
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)