Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0914
         (501 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    25   0.34 
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    25   0.34 
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    25   0.34 
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    25   0.34 
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    24   1.0  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   4.1  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   5.5  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   9.5  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   9.5  

>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 202 NTY*KYNYSFNNFSLGCQK 146
           N Y KYNY+ NN++  C+K
Sbjct: 94  NNY-KYNYNNNNYNNNCKK 111


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 202 NTY*KYNYSFNNFSLGCQK 146
           N Y KYNY+ NN++  C+K
Sbjct: 94  NNY-KYNYNNNNYNNNCKK 111


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 202 NTY*KYNYSFNNFSLGCQK 146
           N Y KYNY+ NN++  C+K
Sbjct: 94  NNY-KYNYNNNNYNNNCKK 111


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 202 NTY*KYNYSFNNFSLGCQK 146
           N Y KYNY+ NN++  C+K
Sbjct: 94  NNY-KYNYNNNNYNNNCKK 111


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +2

Query: 131 PECAFFLTPQRKIIETIIVFLI-CVYLL 211
           P CA  LTP   ++ + I F + C+ +L
Sbjct: 182 PTCALDLTPTYAVVSSSISFYVPCIVML 209


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 179 IIVFLICVYLLVKTYPILKIPIDT 250
           +I+F ICV +   T+  LK  I T
Sbjct: 5   VIIFAICVCVGAMTHEELKTGIQT 28


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 202 NTY*KYNYSFNNFS 161
           N Y  YNY+ NN++
Sbjct: 99  NNYNNYNYNNNNYN 112


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 341 KQI*TLFPFPIIVLKGLKAIVCRLCHFWC 255
           KQI T   FP I L  L +I+  +  F C
Sbjct: 42  KQIETGLAFPSITLIVLGSIIFVISFFGC 70


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = +2

Query: 68  VIKMFEWAYSGANKAVPRNVGP 133
           ++ +FEW ++   K   + +GP
Sbjct: 33  IVHLFEWKWNDIAKECEQFLGP 54


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,527
Number of Sequences: 438
Number of extensions: 3510
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)