Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0912
(611 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 117 8e-27
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 117 8e-27
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 113 9e-26
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 49 2e-06
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 49 2e-06
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 48 7e-06
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 42 3e-04
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 41 6e-04
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 37 0.010
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 35 0.040
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 34 0.092
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 33 0.16
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 33 0.16
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 32 0.37
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 32 0.37
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 32 0.37
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 32 0.37
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 30 1.5
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 30 1.5
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 30 1.5
Z81504-3|CAB04117.2| 349|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z83127-5|CAB05628.2| 575|Caenorhabditis elegans Hypothetical pr... 29 2.6
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 29 3.5
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 29 3.5
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 29 3.5
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 29 3.5
AF040653-6|AAB95032.1| 508|Caenorhabditis elegans F-box b prote... 29 3.5
AC024772-2|AAF60537.2| 756|Caenorhabditis elegans Osm-9 and cap... 28 4.6
AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin ... 28 4.6
U53180-6|AAA96288.1| 202|Caenorhabditis elegans Hypothetical pr... 28 6.0
U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12 transcrip... 27 8.0
AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical ... 27 8.0
AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical ... 27 8.0
AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical ... 27 8.0
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 117 bits (281), Expect = 8e-27
Identities = 69/174 (39%), Positives = 102/174 (58%), Gaps = 30/174 (17%)
Frame = +1
Query: 178 KRNIPIKLGDFSVIDTEFSSIRERFDAE-------MRKMEEEMSKFR------SELMNRE 318
+R I + ++SVID EF ++R+RF+ E M+++ E +R + + N+
Sbjct: 3 ERRIDVNRSNYSVIDNEFGNMRDRFEQEMRRVEEEMKRLRSEFEGYRPNGGPPAAISNQP 62
Query: 319 SNNFFKXXXXXXXXXQ-------------HSDSRQLAE-PSH---WDSLNSPLIQDEGDG 447
N + + H S +A P++ D+L SPLI+DE DG
Sbjct: 63 YNAYSNTSSHHETSNRTGGFGSPLPPPSFHGPSDLMAHRPTYDPYLDNLKSPLIKDESDG 122
Query: 448 KTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKG 609
KTL+LRFDV+ Y PEE+ VKT+DN+LLVHAKHEEK+ ++V+REYN+EFLLP+G
Sbjct: 123 KTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREYNQEFLLPRG 176
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 117 bits (281), Expect = 8e-27
Identities = 69/174 (39%), Positives = 102/174 (58%), Gaps = 30/174 (17%)
Frame = +1
Query: 178 KRNIPIKLGDFSVIDTEFSSIRERFDAE-------MRKMEEEMSKFR------SELMNRE 318
+R I + ++SVID EF ++R+RF+ E M+++ E +R + + N+
Sbjct: 17 ERRIDVNRSNYSVIDNEFGNMRDRFEQEMRRVEEEMKRLRSEFEGYRPNGGPPAAISNQP 76
Query: 319 SNNFFKXXXXXXXXXQ-------------HSDSRQLAE-PSH---WDSLNSPLIQDEGDG 447
N + + H S +A P++ D+L SPLI+DE DG
Sbjct: 77 YNAYSNTSSHHETSNRTGGFGSPLPPPSFHGPSDLMAHRPTYDPYLDNLKSPLIKDESDG 136
Query: 448 KTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPKG 609
KTL+LRFDV+ Y PEE+ VKT+DN+LLVHAKHEEK+ ++V+REYN+EFLLP+G
Sbjct: 137 KTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREYNQEFLLPRG 190
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 113 bits (272), Expect = 9e-26
Identities = 48/68 (70%), Positives = 61/68 (89%)
Frame = +1
Query: 406 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYN 585
D+L SPLI+DE DGKTL+LRFDV+ Y PEE+ VKT+DN+LLVHAKHEEK+ ++V+REYN
Sbjct: 12 DNLKSPLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREYN 71
Query: 586 REFLLPKG 609
+EFLLP+G
Sbjct: 72 QEFLLPRG 79
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +1
Query: 469 DVSQYTPEEIVVKTVDNKLLVHAKHEEKSDT-KSVYREYNREFLLPKG 609
DVSQ+ PEE+ V VDN+L++ KH EK+D V R + R++ LP G
Sbjct: 62 DVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTG 109
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +1
Query: 469 DVSQYTPEEIVVKTVDNKLLVHAKHEEKSDT-KSVYREYNREFLLPKG 609
DVSQ+ PEE+ V VDN+L++ KH EK+D V R + R++ LP G
Sbjct: 61 DVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTG 108
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 47.6 bits (108), Expect = 7e-06
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = +1
Query: 397 SHWD---SLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTK- 564
S WD N +++ + ++ DV +TP+EI VK +LL+H +HE +SD
Sbjct: 12 STWDWPLQHNDGVVKVHNTKEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETRSDNHG 71
Query: 565 SVYREYNREFLLP 603
+V RE NR + LP
Sbjct: 72 TVAREINRAYKLP 84
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 385 LAEPSHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDT- 561
++ PS S N L + DVS+Y + + V VDN ++V H EK DT
Sbjct: 58 ISSPSVVGSQNGNLTSIRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGEKEDTY 117
Query: 562 KSVYREYNREFLLPK 606
++ + R F LPK
Sbjct: 118 GTIESTFKRRFPLPK 132
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +1
Query: 412 LNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREY-NR 588
+NS ++ D+ + + D Q+ PEEI VKT+D+ L++ +HE+ D + + Y R
Sbjct: 103 VNSNVVNDD---RRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVR 159
Query: 589 EFLLPK 606
++ LP+
Sbjct: 160 KYQLPR 165
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 37.1 bits (82), Expect = 0.010
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 436 EGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPK 606
E + ++ DV+ + PEE+ V + L + HE K++ R + R+F LPK
Sbjct: 47 ENTAQKFCVKLDVAAFKPEELKVNLEGHVLTIEGHHEVKTEHGFSKRSFTRQFTLPK 103
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 35.1 bits (77), Expect = 0.040
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +1
Query: 406 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYN 585
D++ ++ DE ++ DVS + PE + +K +L + E KS+ + R ++
Sbjct: 42 DNIGEQIVNDESK---FSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSEHGYLKRSFS 98
Query: 586 REFLLPK 606
+ LLP+
Sbjct: 99 KMILLPE 105
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 33.9 bits (74), Expect = 0.092
Identities = 16/67 (23%), Positives = 35/67 (52%)
Frame = +1
Query: 406 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYN 585
D++ ++ DE ++ DVS + PE++ ++ +L + E+KS+ R ++
Sbjct: 42 DNIGEQIVNDESK---FSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSEHGYSKRSFS 98
Query: 586 REFLLPK 606
+ LLP+
Sbjct: 99 KMILLPE 105
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 442 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPK 606
D ++ DVS + PE + +K +L + E KS+ + R +++ LLP+
Sbjct: 4 DESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSEHGYLKRSFSKMILLPE 58
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 442 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPK 606
D ++ DVS + PE + +K +L + E KS+ + R +++ LLP+
Sbjct: 50 DESKFSVQLDVSHFKPENLKIKLDGRELKIEGIQETKSEHGYLKRSFSKMILLPE 104
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +1
Query: 442 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPK 606
D ++ DVS + PE++ ++ +L + E+KS+ R +++ LLP+
Sbjct: 42 DESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSEHGYSKRSFSKMILLPE 96
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +1
Query: 442 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPK 606
D ++ DVS + PE++ ++ +L + E+KS+ R +++ LLP+
Sbjct: 50 DESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSEHGYSKRSFSKMILLPE 104
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +1
Query: 442 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPK 606
D ++ DVS + PE++ ++ +L + E+KS+ R +++ LLP+
Sbjct: 50 DESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSEHGYSKRSFSKMILLPE 104
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +1
Query: 442 DGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPK 606
D ++ DVS + PE++ ++ +L + E+KS+ R +++ LLP+
Sbjct: 50 DESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSEHGYSKRSFSKMILLPE 104
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 31.1 bits (67), Expect = 0.65
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 460 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEE-KSDTKSVYREYNREFLLPK 606
+ +V PEE+ + KL + A+H+E ++D S + Y++ +LP+
Sbjct: 53 VNLNVPDVKPEELKINLEGRKLSIKAEHQEIENDNISTTQTYSKSIVLPE 102
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 30.7 bits (66), Expect = 0.86
Identities = 12/49 (24%), Positives = 28/49 (57%)
Frame = +1
Query: 460 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPK 606
+ +VS + PEE+ V +L + +H+ +++ + + ++R LLP+
Sbjct: 54 VNLNVSNFKPEELKVNLEGRQLSIQGEHDVENEHGASRKSFSRMILLPE 102
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/65 (21%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 415 NSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEK-SDTKSVYREYNRE 591
N +++ + ++ D + P +I VK ++++H +H+ + ++ V RE +R
Sbjct: 21 NDGVVKVTNTSEKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDNRPTEYGIVNREVHRT 80
Query: 592 FLLPK 606
+ LP+
Sbjct: 81 YKLPE 85
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +1
Query: 460 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPK 606
+ +VSQ+ PE++ + L + + E K+D + ++R LLP+
Sbjct: 52 INLNVSQFKPEDLKINLDGRTLSIQGEQELKTDHGYSKKSFSRVILLPE 100
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +1
Query: 460 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPK 606
+ +VSQ+ PE++ + L + + E K+D + ++R LLP+
Sbjct: 52 INLNVSQFKPEDLKINLDGRTLSIQGEQELKTDHGYSKKSFSRVILLPE 100
>Z81504-3|CAB04117.2| 349|Caenorhabditis elegans Hypothetical
protein F15H9.3 protein.
Length = 349
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -1
Query: 191 GIFLLRPLSAIFHVICRVEIVETKQTLKRSRVNTFHWNNTHSTADKTVLIISRP 30
G+F++ PLS IC I+ + +L+ +T +HS V+I+S P
Sbjct: 255 GVFIIVPLS-----ICMFVIITEEVSLQELATDTMFLVGSHSMCSSAVMILSNP 303
>Z83127-5|CAB05628.2| 575|Caenorhabditis elegans Hypothetical
protein T23F6.5 protein.
Length = 575
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 604 WATKTPCCILCTQISYQISPRVWHGPVI 521
WAT + C +C+ S ++ RVW P +
Sbjct: 154 WATISTCDGICSTTSVNLTARVWRPPTV 181
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = +1
Query: 460 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPK 606
+ +VSQ+ PE++ + + L + + E K++ + ++R LLP+
Sbjct: 52 INLNVSQFKPEDLKINLDGHTLSIQGEQELKTEHGYSKKSFSRVILLPE 100
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = +1
Query: 460 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPK 606
+ +VSQ+ PE++ + + L + + E K++ + ++R LLP+
Sbjct: 52 INLNVSQFKPEDLKINLDGHTLSIQGEQELKTEHGYSKKSFSRVILLPE 100
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = +1
Query: 460 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPK 606
+ +VSQ+ PE++ + + L + + E K++ + ++R LLP+
Sbjct: 52 INLNVSQFKPEDLKINLDGHTLSIQGEQELKTEHGYSKKSFSRVILLPE 100
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = +1
Query: 460 LRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFLLPK 606
+ +VSQ+ PE++ + + L + + E K++ + ++R LLP+
Sbjct: 53 INLNVSQFKPEDLKINLDGHTLSIQGEQELKTEHGYSKKSFSRVILLPE 101
>AF040653-6|AAB95032.1| 508|Caenorhabditis elegans F-box b protein
protein 51 protein.
Length = 508
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 95 NTFHWNNTHSTADKTVLIISRPPSC 21
NT HWNN + VLI SR C
Sbjct: 278 NTLHWNNIQNLLKNGVLIESRRAQC 302
>AC024772-2|AAF60537.2| 756|Caenorhabditis elegans Osm-9 and
capsaicin receptor-relatedprotein 4 protein.
Length = 756
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 244 ERFDAEMRKMEEEMSKFRSELMNRE 318
E F+ + +KM EE KFR EL +
Sbjct: 701 EEFECQRKKMHEERRKFREELRTNQ 725
>AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 3 protein.
Length = 1603
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +1
Query: 490 EEIVVKTVDNKLLVHAKHEEKSDTKSVYREYNREFL 597
EEIVVK D+K LV K +EK + +YN E L
Sbjct: 1367 EEIVVKKSDDKFLV--KVDEKKVNPTELEQYNIEIL 1400
>U53180-6|AAA96288.1| 202|Caenorhabditis elegans Hypothetical
protein D1014.4 protein.
Length = 202
Score = 27.9 bits (59), Expect = 6.0
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = +2
Query: 290 NSDQNS*TEKATISSRAQLARRHLHSTVTADSLLSPVTGIA*TRRSFKTRVTARLSSFAL 469
+++ S E TIS +Q+A + L V+ PV+ +R F +SF
Sbjct: 113 SNELQSVQELRTISGESQMAEQALDYIVSKTFKKIPVSSQKMSRDIFNVCFVFSNNSFIQ 172
Query: 470 MSASILPKRSLLRLSTTNYWSMPNTRRNL 556
+ + R +L +S+ N S+P T+ L
Sbjct: 173 STRDAINYRQILVISSLNDISVPLTQDEL 201
>U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12
transcriptional activator protein.
Length = 515
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 234 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 341
+ Q A R R EE+ RR E Q +QR Q F Q+H
Sbjct: 194 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 230
>AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical
protein Y79H2A.1b protein.
Length = 466
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 234 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 341
+ Q A R R EE+ RR E Q +QR Q F Q+H
Sbjct: 145 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 181
>AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical
protein Y79H2A.1a protein.
Length = 552
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 234 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 341
+ Q A R R EE+ RR E Q +QR Q F Q+H
Sbjct: 231 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 267
>AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical
protein C51G7.4 protein.
Length = 579
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 234 KHQRALRCRNEEDGRRN-EQIQIRTHEQRKQQFLQEH 341
+ Q A R R EE+ RR E Q +QR Q F Q+H
Sbjct: 258 RQQWAERSRYEEEQRRQYEAQQTYAQQQRAQAFWQQH 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,540,723
Number of Sequences: 27780
Number of extensions: 236828
Number of successful extensions: 969
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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