Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0909
(517 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 38 0.001
SPAC4F8.14c |hcs1|hcs|3-hydroxy-3-methylglutaryl-CoA synthase|Sc... 31 0.14
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 30 0.18
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 29 0.31
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c... 29 0.55
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 0.72
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 28 0.72
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 28 0.95
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 27 1.7
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 27 1.7
SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces po... 27 2.2
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 27 2.2
SPCC1223.07c |||aspartate-tRNA ligase |Schizosaccharomyces pombe... 26 2.9
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 26 2.9
SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizos... 26 2.9
SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 3.8
SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|ch... 26 3.8
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 25 5.1
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 25 5.1
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 25 5.1
SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces pombe... 25 5.1
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 25 5.1
SPBC776.16 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 5.1
SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8 |Schizosacch... 25 6.7
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 25 6.7
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 6.7
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 25 8.9
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 8.9
SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyce... 25 8.9
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 25 8.9
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 37.5 bits (83), Expect = 0.001
Identities = 28/127 (22%), Positives = 55/127 (43%)
Frame = +3
Query: 99 SEKSGPFRPKDNITRNGEIIREDSYKSSEGVKKIVGSKIITTRDDNVKSQFNNRKTTAIH 278
SE D+ + + + E S + S+ S+ ++ +DN S ++ +
Sbjct: 135 SESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESS 194
Query: 279 QDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYISTSEDINNRTTSEDINDRTISQKRP 458
++ S+ S +S +E S S + S+SED ++ ++S D + S+
Sbjct: 195 SEDSDSSSSSSDSESESSSEGSDSSSSSSSSESE-SSSEDNDSSSSSSDSESESSSEDSD 253
Query: 459 ESTSSSD 479
S+SSSD
Sbjct: 254 SSSSSSD 260
Score = 35.5 bits (78), Expect = 0.005
Identities = 32/149 (21%), Positives = 68/149 (45%)
Frame = +3
Query: 33 RPKDNLRPEGDFDRPDTQKWVPSEKSGPFRPKDNITRNGEIIREDSYKSSEGVKKIVGSK 212
+ K++L D + ++K P EK+ + +G E SSE
Sbjct: 71 KTKESLEKSNDDSQKISKKGAPPEKA---HSSSEASGSGSSSDESDSSSSESES------ 121
Query: 213 IITTRDDNVKSQFNNRKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYISTS 392
++ D++ S ++ ++ + +D+ + S+ S++ ++ S S S + + S+S
Sbjct: 122 --SSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESS--SEGSDSSSSSSSSESESSS 177
Query: 393 EDINNRTTSEDINDRTISQKRPESTSSSD 479
ED ++ ++S D + S+ S+SSSD
Sbjct: 178 EDNDSSSSSSDSESESSSEDSDSSSSSSD 206
Score = 31.5 bits (68), Expect = 0.077
Identities = 26/136 (19%), Positives = 58/136 (42%)
Frame = +3
Query: 99 SEKSGPFRPKDNITRNGEIIREDSYKSSEGVKKIVGSKIITTRDDNVKSQFNNRKTTAIH 278
SE D+ + + E S + ++ S+ ++ +D+ S ++ +
Sbjct: 153 SESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESS 212
Query: 279 QDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYISTSEDINNRTTSEDINDRTISQKRP 458
+ S+ S + +S +E + S + S+SED ++ ++S D + S+
Sbjct: 213 SEGSDSSSSSSSSESESSSEDNDSSSSSSDSESE-SSSEDSDSSSSSSDSESESSSKDSD 271
Query: 459 ESTSSSDIIERTRSPS 506
S++SSD + + S S
Sbjct: 272 SSSNSSDSEDDSSSDS 287
>SPAC4F8.14c |hcs1|hcs|3-hydroxy-3-methylglutaryl-CoA
synthase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 447
Score = 30.7 bits (66), Expect = 0.14
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +3
Query: 234 NVKSQFNNRKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYISTSEDINNRT 413
N+ + +NR Q + + + H K++ T SI+ + SGT+ Y++ +D+ R+
Sbjct: 384 NLVNDLDNRHCLTPTQYEEAIELRHQAHLKKNFTPKGSIERLRSGTY-YLTGIDDMFRRS 442
Query: 414 TS 419
S
Sbjct: 443 YS 444
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 30.3 bits (65), Expect = 0.18
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = +3
Query: 153 IIREDSYKSSEGVKKIVGSKIITTRDDNVKSQFNNRKTTAIHQDNKTFSTQSET-HTKQS 329
I + +S ++EG I D +S F ++T NKT ++Q T T S
Sbjct: 210 ITQTESSTTTEGSSVASSESTIANSD---QSSFITYESTQNPTANKTDASQQSTESTSSS 266
Query: 330 HTEHSSIKHVHSGTHKYISTSEDINNRTTSEDINDRTISQKRPESTSSSDIIERTRSPSV 509
+ +S I + + T +TSE+ + + T Q +SSS I+E SPSV
Sbjct: 267 ASAYSYITTLQTATTAQQTTSENTYSTSGPNLTTSNTSPQISSTISSSSFIVE---SPSV 323
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 29.5 bits (63), Expect = 0.31
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +3
Query: 234 NVKSQFNNRKTTAIHQDNKTFSTQSETH--TKQSHTEHSSIK 353
N NNR T++ +TF+ S+ H + S ++HSSI+
Sbjct: 271 NTIDLINNRSKTSVENQERTFNLTSDVHLDSPTSPSKHSSIE 312
>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1274
Score = 28.7 bits (61), Expect = 0.55
Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 7/127 (5%)
Frame = +3
Query: 126 KDNITRNGEIIREDSYKSSEGVKKIVGSKIITTRDDNVKSQFNNRKTTAIHQDNKTFSTQ 305
K+N GE+ D K + V ++ KI T D + + N + +K +
Sbjct: 1021 KENSLLTGELKFGDCEKGTVPVTLVLPPKISTKEDTKLGEKCANIVQLQVDLLSKLADQE 1080
Query: 306 SETHTKQSHTEHSSIKHVH-------SGTHKYISTSEDINNRTTSEDINDRTISQKRPES 464
E H K + + + V T++ +ST++ I + +E ++ Q++ E
Sbjct: 1081 KEKHLKYLQSSYKNSLEVQLAKLDIVKETNERLSTADSILSLIDTEALSRYYSCQQKVED 1140
Query: 465 TSSSDII 485
T D++
Sbjct: 1141 TIPRDVV 1147
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 28.3 bits (60), Expect = 0.72
Identities = 31/144 (21%), Positives = 55/144 (38%)
Frame = +3
Query: 81 TQKWVPSEKSGPFRPKDNITRNGEIIREDSYKSSEGVKKIVGSKIITTRDDNVKSQFNNR 260
+Q V S S F + + + S SS S +T+ + S +
Sbjct: 185 SQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTS 244
Query: 261 KTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYISTSEDINNRTTSEDINDRT 440
+++ + + S+ S T + S + S I S + STS I++ ++S T
Sbjct: 245 SSSSSTSSSLSSSSSSSTASSSSSSS-SIISSSSSSSSSPTSTSSTISSSSSSSSSPTST 303
Query: 441 ISQKRPESTSSSDIIERTRSPSVN 512
S S+SSS S S++
Sbjct: 304 SSTISSSSSSSSSFSSTLSSSSMS 327
Score = 26.2 bits (55), Expect = 2.9
Identities = 29/138 (21%), Positives = 49/138 (35%)
Frame = +3
Query: 93 VPSEKSGPFRPKDNITRNGEIIREDSYKSSEGVKKIVGSKIITTRDDNVKSQFNNRKTTA 272
V S S P + T + S S+ S + ++ + S ++ +
Sbjct: 215 VVSSSSSPSSSSSS-TLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSII 273
Query: 273 IHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYISTSEDINNRTTSEDINDRTISQK 452
+ + S S + T S + SS S T S+S + T S + S
Sbjct: 274 SSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFS 333
Query: 453 RPESTSSSDIIERTRSPS 506
++SSS I + SPS
Sbjct: 334 SSPTSSSSTISSSSSSPS 351
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 28.3 bits (60), Expect = 0.72
Identities = 20/83 (24%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Frame = +3
Query: 231 DNVKSQFNNRKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTH---KYISTSEDI 401
D++++Q ++R+T AI + N+ F+T SE K S E + +K ++ ++ +Y + ++I
Sbjct: 809 DSLQTQSSDRQT-AITELNEEFATSSEVDNKIS-IEETKLKFMNVNSYVMEQYDARKKEI 866
Query: 402 NNRTTSEDINDRTISQKRPESTS 470
+ D+++ + + E S
Sbjct: 867 EELESKMSDFDQSVEELQDEMNS 889
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 27.9 bits (59), Expect = 0.95
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Frame = +3
Query: 96 PSEKSGPFRPKDNITRNGEIIREDSYKSSEGVKKIVGSKIITTRDDNVKSQFNN--RKTT 269
P EK+ PF+P N + G ++ + +S E V K + R +K++ N + T
Sbjct: 56 PKEKAKPFKPPKNGVQYG-FVKFVNAESIEEVLKDAKGMTLGQRKLTIKARVVNPAKLTD 114
Query: 270 AIHQDNKTFSTQSETHTK-QSHTEHSSIKH--VHSGTHKYISTSEDINNRTTSEDINDRT 440
+ N T T + + Q++T+ ++K S ++I E+ N T IN R
Sbjct: 115 KKFKPNDTSITANVFNPSIQNNTDEENVKPGLKQSQIKEFIPNVEE-RNWETVRGINSR- 172
Query: 441 ISQKRPEST 467
+PE+T
Sbjct: 173 --NPKPETT 179
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 27.1 bits (57), Expect = 1.7
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +3
Query: 342 SSIKHVHSGTHKYISTSEDINNRTTSEDINDRTISQKRPESTSSSDIIERTRSPSVN 512
S+ K V G ++++ S + + + ND +Q PE T+S + + +PS++
Sbjct: 778 SNGKIVEKGNYEHLFVSTNSELKQQLSEFNDEKDTQPLPEHTTSYPSTQISLAPSIH 834
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 27.1 bits (57), Expect = 1.7
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +3
Query: 216 ITTRDDNVKSQFNNRKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKY-ISTS 392
I+ D+NV + + A +++ + + QS ++++H H G Y + S
Sbjct: 452 ISDDDENVATSTTESPSNATKENSLSRNVQSPNIDTAISNRSTNVRHGHPGFKDYTVENS 511
Query: 393 EDINNRTTSE 422
R+TSE
Sbjct: 512 PASRERSTSE 521
>SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 26.6 bits (56), Expect = 2.2
Identities = 28/113 (24%), Positives = 48/113 (42%)
Frame = +3
Query: 36 PKDNLRPEGDFDRPDTQKWVPSEKSGPFRPKDNITRNGEIIREDSYKSSEGVKKIVGSKI 215
P + P + +T K+ P KS +RPK + T + + + KSS K SK
Sbjct: 149 PDSSQLPTYKTEYSETTKF-PLGKS--YRPKASRTTSSQSVASTMTKSSTKTSKKKSSKK 205
Query: 216 ITTRDDNVKSQFNNRKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTH 374
+ + N S N+R +TA T + +E + ++HS + +H
Sbjct: 206 NSKSESNQDSS-NDRSSTA----PSTAESNNEHLSSSQKSKHSIVFMAEQTSH 253
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 26.6 bits (56), Expect = 2.2
Identities = 17/58 (29%), Positives = 21/58 (36%), Gaps = 4/58 (6%)
Frame = +3
Query: 219 TTRDDNVKSQFNNRKTTAIHQD----NKTFSTQSETHTKQSHTEHSSIKHVHSGTHKY 380
TT D N+ +F K Q N +Q E + S H H H HKY
Sbjct: 497 TTNDINIFEEFEEEKDNVEAQKMGYTNDDHVSQHEHTHENSQEHHHEHNHNHDHIHKY 554
>SPCC1223.07c |||aspartate-tRNA ligase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 580
Score = 26.2 bits (55), Expect = 2.9
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 96 PSEKSGPFRPKDNITRNGEIIREDSYKSSEGVKKIVGSKIITTRDDNV 239
P +K+ PF +D R+ E IRE ++EG K V + T D+ V
Sbjct: 196 PIKKNLPFLVED-AGRSEEQIRESEENAAEGDSKFVRVNLDTRLDNRV 242
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 26.2 bits (55), Expect = 2.9
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +3
Query: 282 DNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYISTSEDINNRTTSEDI 428
DNK +S + + + TE+ S+ +K +TSE + +SE +
Sbjct: 534 DNKVYSYPEDFNATNT-TEYKSVSRASQSQYKATATSEKSHETPSSESL 581
>SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 26.2 bits (55), Expect = 2.9
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +3
Query: 291 TFSTQSETHTKQSHTEH-SSIKHVHSGTHKYISTSEDINNRTTSE----DINDRTISQKR 455
+F + HT +EH SS + H + S+SE ++ +SE +D + S R
Sbjct: 64 SFRSLRRGHTSGHASEHTSSSRSSHDESDSMSSSSESDSDSVSSESNPKSYSDSSTSSAR 123
Query: 456 PESTSSS 476
STS S
Sbjct: 124 SSSTSGS 130
>SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 608
Score = 25.8 bits (54), Expect = 3.8
Identities = 22/83 (26%), Positives = 34/83 (40%)
Frame = +3
Query: 246 QFNNRKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYISTSEDINNRTTSED 425
+F NRKTT+ + KT T T Q+ E K + IN + E
Sbjct: 471 RFENRKTTSKPKAKKTLVTSIPTKPHQASVE------------KVYDLNSKINLKNIPEQ 518
Query: 426 INDRTISQKRPESTSSSDIIERT 494
R + K E T+ D++++T
Sbjct: 519 SISRLSTLKWNEGTTIKDVLKQT 541
>SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|chr
3|||Manual
Length = 923
Score = 25.8 bits (54), Expect = 3.8
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 150 EIIRED-SYKSSEGVKKIVGSKIITTRDDNVKSQFN-NRKTTAIHQDNKTFSTQSETHTK 323
E +R D S+K + + + K + DNV N RK + + K F T K
Sbjct: 611 EKVRLDRSWKDALTINEFFTLKNAVEKQDNVSFHVNKKRKVSQKREKQKKFLYDEPTFKK 670
Query: 324 QSHTEHSSIKHVH 362
++ +K++H
Sbjct: 671 EASPHSDVLKNLH 683
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 25.4 bits (53), Expect = 5.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 411 TTSEDINDRTISQKRPESTSSSDIIERTRSPSVN 512
TTSE +R ++ ES S D+ + SPSV+
Sbjct: 191 TTSEAFIERLQNELELESISEDDLYSKRLSPSVS 224
>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1024
Score = 25.4 bits (53), Expect = 5.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 387 TSEDINNRTTSEDINDRTISQKRPESTSSSDIIERTRS 500
TS D +N + ED+ + QKR ST + E RS
Sbjct: 37 TSVDEDNTSVFEDVEAQDSRQKRFSSTLEGNRFEELRS 74
>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 945
Score = 25.4 bits (53), Expect = 5.1
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 342 SSIKHV-HSGTHKYISTSEDINNRTTSEDINDRTISQKRPESTSSS-DIIERTRSPSVND 515
S + H SG H +T + + EDI+D I + S S+S D + + S++D
Sbjct: 389 SQLNHYSESGAHAADATKSSVAHNEKVEDISDSDIPIMKTSSNSTSLDADRDSDTSSISD 448
>SPBC1105.04c |cbp1|abp1|CENP-B homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 5.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 381 ISTSEDINNRTTSEDINDRTISQKRPEST 467
+ +SEDI N+ S+ ++DR EST
Sbjct: 438 VDSSEDIINQIASQYMDDRAFETDEEEST 466
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 25.4 bits (53), Expect = 5.1
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +3
Query: 231 DNVKSQFNNRKTTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGT 371
D + ++ N+ + DN+ ++ ++ H Q +HS+ H+GT
Sbjct: 21 DGMPPEYTNQDPNSDQADNE--NSDAKAHQPQHSPQHSTENQGHTGT 65
>SPBC776.16 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 253
Score = 25.4 bits (53), Expect = 5.1
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 8/98 (8%)
Frame = +3
Query: 231 DNVK--SQFNNRKTTAIHQD---NKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYISTSE 395
DN K SQ N R + +D + TFS T +K H HS+ K S
Sbjct: 84 DNNKLLSQNNYRLPDYLEEDEIVSYTFSKTGPTTSKNKHPSHSNTIRSPPYKVKKESCHT 143
Query: 396 DINN--RTTSEDINDRTISQKRPESTSSSDI-IERTRS 500
+INN ++E IN S+ TS + + + RS
Sbjct: 144 EINNVSNVSTESINVIDASRGYSPYTSVDSLSVSKNRS 181
>SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 393 EDINNRTTSEDINDRTISQKRPESTSSS 476
EDIN + ++DIN R P S +S
Sbjct: 111 EDINFQNDADDINQRFTYNNHPASVENS 138
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 25.0 bits (52), Expect = 6.7
Identities = 14/71 (19%), Positives = 30/71 (42%)
Frame = +3
Query: 264 TTAIHQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYISTSEDINNRTTSEDINDRTI 443
++A + S+ S + + S + S +H STS+ ++ +S + +
Sbjct: 525 SSATSSSKSSSSSSSRSGSSSSSSSRSGSTSSSGSSHTITSTSQSVHTSGSSTSTSSVAV 584
Query: 444 SQKRPESTSSS 476
+ S+SSS
Sbjct: 585 TSTAYSSSSSS 595
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.0 bits (52), Expect = 6.7
Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
Frame = +3
Query: 291 TFSTQSETHTKQSH------TEHSSIKHVHSGTHKYISTSEDINNRTTSEDINDRTISQK 452
++ SET + H ++HSS K H + STS N T+S + S
Sbjct: 306 SYDNSSETFVEAIHKILDTKSKHSSSKSSHDSSQGLESTSSIALNPTSSISSTSSSSSTS 365
Query: 453 RPESTSSSDIIERTRSPS 506
ST S D + S S
Sbjct: 366 SAISTISQDHTKTVTSVS 383
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 24.6 bits (51), Expect = 8.9
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +3
Query: 276 HQDNKTFSTQSETHTKQSHTEHSSIKHVHSGTHKYISTSEDINNRTTSEDINDR 437
H+D S Q + + + +HSS K HS Y + + RT ++ R
Sbjct: 172 HRDRHHRSNQDRSRERSDNEQHSSDKREHS-RRSYRNDRNNWRERTHNDRYRHR 224
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 24.6 bits (51), Expect = 8.9
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = +3
Query: 21 PSQIRPKD-NLRPEGDFDRPDTQKWVPSEKSGPFRPKDNITRNGEIIRE--DSYKSSEGV 191
P+ + K+ N + G+ D K +K GP +PK+ T G+ + S+ +S
Sbjct: 369 PTNVSTKNRNNQTVGEHPYVDDNK---KKKKGPAKPKEKATL-GKTVNSFFGSHSTSNYS 424
Query: 192 KKIVGSKIITTRDDNVKSQFNNRKTTAIHQDNK 290
K + +K+ + D++ + N K QDN+
Sbjct: 425 KVPLSAKLTGEKSDDLSNLLKN-KGKKKSQDNQ 456
>SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1210
Score = 24.6 bits (51), Expect = 8.9
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Frame = +3
Query: 351 KHVHSGTHKYISTSEDINNRTTSEDINDRTISQ---KRPESTSSSDIIERTRSPSVN 512
K H H Y+ S+D+N S D D + K+ T S D I P ++
Sbjct: 746 KDKHKSLHVYLEKSKDVNAELRSLDTIDHLWTYFPFKKDLKTKSFDCIVIASQPKLS 802
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 24.6 bits (51), Expect = 8.9
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Frame = +3
Query: 177 SSEGVKKIVGSKIITTRDDNVKSQFNNRKTTAIHQDNKTFSTQSETHTK-QSHTEHSSIK 353
+SEG T D Q + K A +D+ F + + S + +
Sbjct: 648 NSEGSSDFESKSSDNTSLDGTPLQNTDFKKVATVEDDSPFDELDKFSSPFSSSSSRGGLS 707
Query: 354 HVHSGTHKYISTSEDINNR-TTSEDINDRTISQKRPESTSSSDIIERTRS 500
H+ S + IS + + + S + R + K PE+ SSS++I++ S
Sbjct: 708 HI-SSRNVSISVPTVLQDVFSDSPLVLSRKLRGKIPENVSSSELIKKCAS 756
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,035,861
Number of Sequences: 5004
Number of extensions: 39615
Number of successful extensions: 172
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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