Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0908
(595 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 71 6e-13
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 69 2e-12
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 69 2e-12
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 64 9e-11
At1g62170.1 68414.m07013 serpin family protein / serine protease... 64 9e-11
At1g64030.1 68414.m07252 serpin family protein / serine protease... 63 1e-10
At2g14540.1 68415.m01628 serpin family protein / serine protease... 58 6e-09
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi... 51 5e-07
At2g35580.1 68415.m04357 serpin family protein / serine protease... 50 2e-06
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi... 50 2e-06
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 1.0
At5g37490.1 68418.m04515 U-box domain-containing protein similar... 29 1.8
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 29 1.8
At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containi... 29 3.1
At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containi... 29 3.1
At5g01060.1 68418.m00009 protein kinase family protein contains ... 28 4.1
At2g43210.2 68415.m05371 UBX domain-containing protein contains ... 28 4.1
At2g43210.1 68415.m05370 UBX domain-containing protein contains ... 28 4.1
At2g32620.1 68415.m03982 cellulose synthase family protein simil... 28 5.4
At2g20210.1 68415.m02363 leucine-rich repeat family protein cont... 27 7.1
At5g03730.2 68418.m00334 serine/threonine protein kinase (CTR1) ... 27 9.4
At5g03730.1 68418.m00333 serine/threonine protein kinase (CTR1) ... 27 9.4
At3g15920.1 68416.m02013 phox (PX) domain-containing protein wea... 27 9.4
At1g67650.1 68414.m07720 expressed protein 27 9.4
At1g60770.1 68414.m06841 pentatricopeptide (PPR) repeat-containi... 27 9.4
At1g27580.1 68414.m03361 F-box family protein similar to F-box p... 27 9.4
At1g23460.1 68414.m02939 polygalacturonase, putative / pectinase... 27 9.4
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 70.9 bits (166), Expect = 6e-13
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Frame = +2
Query: 149 GKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVE 328
G ++V S S+ L +A S+ T E++L I P D + A K+ + G+E
Sbjct: 28 GSNLVFSPMSINVLLCLIAAGSNCVTKEQILSFIMLPSSDYLNAVLA-KTVSVALNDGME 86
Query: 329 -----LKMANKVYVHDGGKLDENFAVVSTDVFNSDVQNIDFS-KNTVAAKSINDWVEENT 490
L A V++ +F + + +N+ +DF+ K +N W E +T
Sbjct: 87 RSDLHLSTAYGVWIDKSLSFKPSFKDLLENSYNATCNQVDFATKPAEVINEVNAWAEVHT 146
Query: 491 NNRIKDLVNPDSLSSATAAVLV--NAIYFKGAWSSKF 595
N IK++++ DS+ + ++L+ NA+YFKGAWS KF
Sbjct: 147 NGLIKEILSDDSIKTIRESMLILANAVYFKGAWSKKF 183
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 69.3 bits (162), Expect = 2e-12
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 8/182 (4%)
Frame = +2
Query: 74 LSNVLKNGNDNFTARMFTEVVKNNP--GKSVVLSAFSVLPPLAQLALASDGETHEELLKA 247
L ++N N N AR+ +V++ + G +VV S S+ L+ +A S+ T EE+L
Sbjct: 3 LGKSIENQN-NVVARLAKKVIETDVANGSNVVFSPMSINVLLSLIAAGSNPVTKEEILSF 61
Query: 248 IGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENFAVVSTDVFNSDVQN 427
+ P D + A + + L A+ V++ L +F + + + +
Sbjct: 62 LMSPSTDHLNAVLAKIADGGTERSDLCLSTAHGVWIDKSSYLKPSFKELLENSYKASCSQ 121
Query: 428 IDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSA-----TAAVLVNAIYFKGAWSS 589
+DF+ V +N W + +TN IK +++ D + + +L NA+YFK AWS
Sbjct: 122 VDFATKPVEVIDEVNIWADVHTNGLIKQILSRDCTDTIKEIRNSTLILANAVYFKAAWSR 181
Query: 590 KF 595
KF
Sbjct: 182 KF 183
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 68.9 bits (161), Expect = 2e-12
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 6/170 (3%)
Frame = +2
Query: 104 NFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTE 283
N + T V +N+ +V+ S S+ L+ +A S G T +++L + F D + +
Sbjct: 16 NLAKHVITTVSQNS---NVIFSPASINVVLSIIAAGSAGATKDQILSFLKFSSTDQLNS- 71
Query: 284 FASKS-----RDLRSIKGVELKMANKVYVHDGGKLDENFAVVSTDVFNSDVQNIDF-SKN 445
F+S+ D + G +L +AN ++ +F + D + + DF SK
Sbjct: 72 FSSEIVSAVLADGSANGGPKLSVANGAWIDKSLSFKPSFKQLLEDSYKAASNQADFQSKA 131
Query: 446 TVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKF 595
+N W E+ TN I +++ S S T + NA+YFKG W+ KF
Sbjct: 132 VEVIAEVNSWAEKETNGLITEVLPEGSADSMTKLIFANALYFKGTWNEKF 181
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 63.7 bits (148), Expect = 9e-11
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Frame = +2
Query: 323 VELKMANKVYVHDGGKLDENFAVVSTDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNR 499
+ L +AN V++ L +F + + + + +DF SK + +N W E +TN
Sbjct: 25 LRLSIANGVWIDKFFSLKLSFKDLLENSYKATCSQVDFASKPSEVIDEVNTWAEVHTNGL 84
Query: 500 IKDLVNPDSLSS--ATAAVLVNAIYFKGAWSSKF 595
IK +++ DS+ + ++ VL NA+YFKGAWSSKF
Sbjct: 85 IKQILSRDSIDTIRSSTLVLANAVYFKGAWSSKF 118
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 63.7 bits (148), Expect = 9e-11
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Frame = +2
Query: 38 TIAIAAMAAVTNLS--NVLKNGNDN---FTARMFTEVVKNNPGKSVVLSAFSVLPPLAQL 202
T + A +++N+ +K ND T + + V KN+ + V S S+ L +
Sbjct: 50 TDLVIASPSLSNIDVGEAMKKQNDVAIFLTGIVISSVAKNS---NFVFSPASINAALTMV 106
Query: 203 ALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVE--LKMANKVYVHDGGKLD 376
A +S GE EEL I + E + R++ S+ V+ K K+ V +G +D
Sbjct: 107 AASSGGEQGEELRSFILSFLKSSSTDELNAIFREIASVVLVDGSKKGGPKIAVVNGMWMD 166
Query: 377 ENFAV--VSTDVF----NSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 535
++ +V +S D+F ++ +DF SK +N W +TN IKDL+ S++S
Sbjct: 167 QSLSVNPLSKDLFKNFFSAAFAQVDFRSKAEEVRTEVNAWASSHTNGLIKDLLPRGSVTS 226
Query: 536 ATAAVLVNAIYFKGAWSSKF 595
T V +A+YFKG W K+
Sbjct: 227 LTDRVYGSALYFKGTWEEKY 246
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 63.3 bits (147), Expect = 1e-10
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Frame = +2
Query: 155 SVVLSAFSVLPPLAQLALASDGE-THEELLKAIGFPDDDAIRTEFASKSR----DLRSIK 319
+V+ S S+ + A G+ ++L + D ++T F + D +
Sbjct: 30 NVIFSPASINSAITMHAAGPGGDLVSGQILSFLRSSSIDELKTVFRELASVVYADRSATG 89
Query: 320 GVELKMANKVYVHDGGKLDENFAVVSTDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNN 496
G ++ AN +++ D F + + F + +DF S+ K +N WVE +TNN
Sbjct: 90 GPKITAANGLWIDKSLPTDPKFKDLFENFFKAVYVPVDFRSEAEEVRKEVNSWVEHHTNN 149
Query: 497 RIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKF 595
IKDL+ S++S T + NA+ FKGAW F
Sbjct: 150 LIKDLLPDGSVTSLTNKIYANALSFKGAWKRPF 182
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 57.6 bits (133), Expect = 6e-09
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 9/184 (4%)
Frame = +2
Query: 71 NLSNVLKNGNDN---FTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEEL- 238
++ +KN N+ ++ + V KN+ + V S S+ L A +D +T
Sbjct: 30 DMQEAMKNQNEVSLLLVGKVISAVAKNS---NCVFSPASINAVLTVTAANTDNKTLRSFI 86
Query: 239 ---LKAIGFPDDDAIRTEFASKS-RDLRSIKGVELKMANKVYVHDGGKLDENFAVVSTDV 406
LK+ + +AI E AS +D G ++ N V++ + ++ + +
Sbjct: 87 LSFLKSSSTEETNAIFHELASVVFKDGSETGGPKIAAVNGVWMEQSLSCNPDWEDLFLNF 146
Query: 407 FNSDVQNIDFSKNTVAAK-SINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 583
F + +DF + +N W +TN+ IK+++ S++S T + NA+YFKGAW
Sbjct: 147 FKASFAKVDFRHKAEEVRLDVNTWASRHTNDLIKEILPRGSVTSLTNWIYGNALYFKGAW 206
Query: 584 SSKF 595
F
Sbjct: 207 EKAF 210
>At1g51330.1 68414.m05772 serpin-related / serine protease
inhibitor-related similar to serpin [Hordeum vulgare
subsp. vulgare] CAA64599.1 GI:1197577
Length = 193
Score = 51.2 bits (117), Expect = 5e-07
Identities = 20/44 (45%), Positives = 30/44 (68%)
Frame = +2
Query: 464 INDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKF 595
+N W +TN IK+L+ P S+++ T + NA+YFKGAW +KF
Sbjct: 39 VNSWALRHTNGLIKNLLPPGSVTNQTIKIYGNALYFKGAWENKF 82
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 49.6 bits (113), Expect = 2e-06
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 9/144 (6%)
Frame = +2
Query: 191 LAQLALASDGETHE-----ELLKAIGFPDDDAIRTEFASKS-RDLRSIKGVELKMANKVY 352
L+ +A +S G+T LL+A A+ +E + D + G + AN ++
Sbjct: 40 LSIIAASSPGDTDTADKIVSLLQASSTDKLHAVSSEIVTTVLADSTASGGPTISAANGLW 99
Query: 353 VHDGGKLDENFAVVSTDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLV--NPD 523
+ ++ +F + + + + +DF +K + +N WVE+ TN I +L+ NP
Sbjct: 100 IEKTLNVEPSFKDLLLNSYKAAFNRVDFRTKADEVNREVNSWVEKQTNGLITNLLPSNPK 159
Query: 524 SLSSATAAVLVNAIYFKGAWSSKF 595
S + T + NA++F G W S+F
Sbjct: 160 S-APLTDHIFANALFFNGRWDSQF 182
>At1g63280.1 68414.m07154 serpin-related / serine protease
inhibitor-related similar to protein zx [Hordeum vulgare
subsp. vulgare] GI:19071, serpin [Triticum aestivum]
GI:1885346
Length = 120
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +2
Query: 458 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKF 595
+ +N W ++TN I DL+ S+ S T V NA+YFKGAW +KF
Sbjct: 14 QELNKWASDHTNGLIIDLLPRGSVKSETVQVYGNALYFKGAWENKF 59
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 169 REDNAFPWIIFHYFGKHSGCEVIVSIFEHIREICDG 62
R D +++F KHS CE+ VS E ++ G
Sbjct: 2 RSDTVLDYVVFELSPKHSKCELFVSSNEQTEKLASG 37
>At5g37490.1 68418.m04515 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 435
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 193 ERRQHRKCREDNAFPWIIFHYFGKHSGCEVIVSIFEHI 80
E ++RKC +N+ W++ F K SG E + + I
Sbjct: 153 ESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEI 190
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 128 EVVKN--NPGKSVVLSAFSVLPPLAQLALASDGETHEELL 241
E VKN +PGK VL +++L P AQL + + E E L+
Sbjct: 636 EQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLV 675
>At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 511
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +2
Query: 68 TNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKA 247
T +S +NGN + +MF + K+ K ++ SVLP A L G E +
Sbjct: 184 TVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARE 243
Query: 248 IGFPDD 265
GF D+
Sbjct: 244 NGFFDN 249
>At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 613
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 166 EDNAFPWIIFHYFGKHSGCEVIVSIFEHIRE 74
+D F ++ +GKH CE + IFE +RE
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLRE 464
>At5g01060.1 68418.m00009 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 499
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 137 KNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFA 289
KN P K+ + L P +D + ELL+ +G+ +D+ + EF+
Sbjct: 337 KNLPEKTKPATESLKLTPFGDACSRADLSSIHELLEKLGYEEDNGVGNEFS 387
>At2g43210.2 68415.m05371 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 531
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -2
Query: 330 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 151
S TP+ S +L SV + ++ P ++S V PSE K+ +TEN + T
Sbjct: 138 SETPVSSASSVVLPPGSVPLDAAVASP---STASSVQPSETKSTVTSASTTENNDGTVAV 194
Query: 150 PG 145
G
Sbjct: 195 KG 196
>At2g43210.1 68415.m05370 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 531
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -2
Query: 330 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 151
S TP+ S +L SV + ++ P ++S V PSE K+ +TEN + T
Sbjct: 138 SETPVSSASSVVLPPGSVPLDAAVASP---STASSVQPSETKSTVTSASTTENNDGTVAV 194
Query: 150 PG 145
G
Sbjct: 195 KG 196
>At2g32620.1 68415.m03982 cellulose synthase family protein similar
to Zea mays cellulose synthase-5 [gi:9622882], -4
[gi:9622880], -9 [gi:9622890]
Length = 757
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -2
Query: 291 LANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLFPGLFFTTSVNILA 112
L+ +V + S P+ S S + PS+ + + G TE PG F VN+ A
Sbjct: 627 LSKNVFLVSKKTMPVETMSGSGIGPSQREDDGPNSGKTEFDGSLYFLPGTFIVL-VNLAA 685
Query: 111 V 109
+
Sbjct: 686 L 686
>At2g20210.1 68415.m02363 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 604
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +2
Query: 80 NVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFP 259
N+ KN TAR ++++ P + ++++++PP A L L T + LK +
Sbjct: 503 NISKNRGGLETARFLSKLIPLAPKLISIDASYNLMPPEALLMLCDSLRTAKGDLKRLDMT 562
Query: 260 DDDAIRTE 283
+ I E
Sbjct: 563 GNSCISHE 570
>At5g03730.2 68418.m00334 serine/threonine protein kinase (CTR1)
identical to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 821
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 239 LKAIGFPDDDAIRTEFASKSRDLR 310
++++GFP DD R F DLR
Sbjct: 121 IESVGFPQDDGFRLGFGGGGGDLR 144
>At5g03730.1 68418.m00333 serine/threonine protein kinase (CTR1)
identical to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 821
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 239 LKAIGFPDDDAIRTEFASKSRDLR 310
++++GFP DD R F DLR
Sbjct: 121 IESVGFPQDDGFRLGFGGGGGDLR 144
>At3g15920.1 68416.m02013 phox (PX) domain-containing protein weak
similarity to myosin heavy chain [Rana catesbeiana]
GI:4249699; contains Pfam profile PF00787: PX domain
Length = 755
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 356 HDGGKLDENFAVVSTDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKD 508
HD DE + ++++N+ FS+N+ A ++ DW E T + D
Sbjct: 262 HDNDSADETSNASTMKHDEANLKNL-FSRNSTAVDNVTDWHELITEYGLLD 311
>At1g67650.1 68414.m07720 expressed protein
Length = 651
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/80 (22%), Positives = 42/80 (52%)
Frame = +2
Query: 86 LKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDD 265
L++G + +R++ E+VKN+ ++ ++ LA++ + E +E+ LK + P
Sbjct: 470 LRHGQEEEASRLYEEIVKNHNSTDALV---GLVTTLARVNV-EKAEAYEKQLKPL--PGL 523
Query: 266 DAIRTEFASKSRDLRSIKGV 325
A+ + K+ + I+G+
Sbjct: 524 KAVDVDNLEKTSGAKPIEGI 543
>At1g60770.1 68414.m06841 pentatricopeptide (PPR) repeat-containing
protein low similarity to DNA-binding protein [Triticum
aestivum] GI:6958202; contains Pfam profile PF01535: PPR
repeat
Length = 491
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 71 NLSNVLKNGNDNFTARMFTEVVK 139
NL +LKNG DN A +F +++
Sbjct: 431 NLLEILKNGTDNIGAEIFEPLIR 453
>At1g27580.1 68414.m03361 F-box family protein similar to F-box
protein family, AtFBX7 (GI:20197899) [Arabidopsis
thaliana]; confirmed by FLcDNA GI:16604421; contains
uncharacterized Arabidoppsis domain shared by 33
Arabidopsis proteins;simlar to unknown protein
GB:AAC63676
Length = 364
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 230 EELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYV 355
EE +K + D+D R EF + DLR V+ K N V V
Sbjct: 96 EENVKHMLMDDEDPFRDEFPHAAEDLRGRLWVDDKNGNYVVV 137
>At1g23460.1 68414.m02939 polygalacturonase, putative / pectinase,
putative similar to polygalacturonase GB:BAA88472
GI:6624205 from (Cucumis sativus); contains Pfam profile
PF00295: Glycosyl hydrolases family 28
(polygalacturonases)
Length = 459
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 389 VVSTDV-FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAI 565
+V TD+ +++N D + + DW + + K+LVN D+ +A V +
Sbjct: 24 MVYTDLDILDELENFDVLVDDDDDTKLLDWPSFTSRHSGKNLVNVDTFGAAGDGVSDDTQ 83
Query: 566 YFKGAWS 586
F AWS
Sbjct: 84 AFVSAWS 90
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,277,747
Number of Sequences: 28952
Number of extensions: 242794
Number of successful extensions: 834
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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