Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0907
(403 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33596| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.050
SB_8645| Best HMM Match : 7tm_1 (HMM E-Value=0) 31 0.46
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.81
SB_58030| Best HMM Match : cIII (HMM E-Value=7.7) 29 1.9
SB_50195| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_47875| Best HMM Match : rve (HMM E-Value=3.3e-16) 28 3.3
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 28 3.3
SB_47910| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_31266| Best HMM Match : PKI (HMM E-Value=1) 27 4.3
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_4754| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_48142| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_56839| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_30915| Best HMM Match : cNMP_binding (HMM E-Value=6.3e-10) 27 7.6
SB_30758| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 27 7.6
SB_4748| Best HMM Match : RVT_1 (HMM E-Value=0.0022) 27 7.6
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_56374| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 27 7.6
SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_4826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_34869| Best HMM Match : Phage_integrase (HMM E-Value=0.087) 26 10.0
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 26 10.0
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
>SB_33596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 881
Score = 33.9 bits (74), Expect = 0.050
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +2
Query: 38 PTSVTMSLNPNFFPNGYQDPKHPEEEVVSNWPYRTTPL-VLPGAKVRREPGPTESYLRHH 214
P T P+ P + P HP S+ PY T L G + REP P S+ H
Sbjct: 474 PHHATSYNAPSGMPTHREPPPHPS--FASHQPYHVTSCDALSGMQTHREPPPHPSFASHQ 531
Query: 215 P 217
P
Sbjct: 532 P 532
Score = 30.3 bits (65), Expect = 0.61
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 89 QDPKHPEEEVVSNWPYRTTPL-VLPGAKVRREPGPTESYLRHHP 217
+ P HP S+ PY T L G + REP P S+ H P
Sbjct: 520 EPPPHPS--FASHQPYHVTSCDALSGMQTHREPPPHPSFASHQP 561
>SB_8645| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 432
Score = 30.7 bits (66), Expect = 0.46
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 91 LVSVREEVGVERHCYTCRYGRASCRI 14
LVS+ + +E H YT YGRA CR+
Sbjct: 84 LVSIPFDFALEEHEYTWLYGRAMCRL 109
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 29.9 bits (64), Expect = 0.81
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 182 PGPTESYLRHHPNPAMRAPPNHDYRDTLMKQ--KVLHKQFNSPINLYSEQNIANSIRQQT 355
PGP+ S P P+ R P +Y + +Q +VL ++ +L S + T
Sbjct: 1319 PGPSTS-TNVTPLPSPRLPQRPNYEGDMREQLEQVLTRESRERSSLRSSR--------PT 1369
Query: 356 SPLPTNGHYGRPH 394
+PLPT GH PH
Sbjct: 1370 APLPTPGHRPEPH 1382
>SB_58030| Best HMM Match : cIII (HMM E-Value=7.7)
Length = 167
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = -1
Query: 244 VRRCPHCWVGVMTQVTLCGARLPSDLSSREHERSGAVRPVADNFFFRMFRILVSVREEVG 65
V + P G+ + C A +P +++ H R +P+ F+ +I ++V
Sbjct: 63 VAKLPVRMFGIRYEEATCAAHVPCTINNSPHSRLNK-QPIPSRFYPVFDKIGLTVAGYQP 121
Query: 64 VERHCYTCR 38
R CY C+
Sbjct: 122 GTRWCYRCK 130
>SB_50195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 84 PFGKKLGLSDIVTLVGMDVPRAEFLQPG 1
PFG K G + + G+D EFLQPG
Sbjct: 42 PFGTKAGTGPPLEVDGIDKLDIEFLQPG 69
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = +2
Query: 209 HHPNPAMRAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYGR 388
H P P M PP + D K H N P++ + ++ + +R + + YG
Sbjct: 549 HRPLPCMEGPPVEIHVDPTSKPTACHTPANIPLH-WQKRVYEDLLRDEALGVVERVPYGE 607
Query: 389 P 391
P
Sbjct: 608 P 608
>SB_47875| Best HMM Match : rve (HMM E-Value=3.3e-16)
Length = 488
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 148 RSGAVRPVADNFFFRMFRILVSVREEVGVERHCYTCRYG 32
++ A PVADNF R +I V + + V + CR G
Sbjct: 53 KNEATLPVADNFKDRFQQIQVEIEHMIAVLQQMELCRSG 91
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 27.9 bits (59), Expect = 3.3
Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Frame = +2
Query: 95 PKHPEEEVVSNWPYRTTPLV----LPGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDT 262
P+ P N P R P V P +RRE G T+S+ P P R P D +
Sbjct: 697 PQIPTRTGSVNKPSRAPPPVPNHPSPAVPLRRE-GDTKSFAPQRPPPPTRTPSGKDRPHS 755
Query: 263 LMKQKVLH 286
LH
Sbjct: 756 TTATPTLH 763
>SB_47910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 273 KRCCTSNSTLQSIYTRNRTLQTLS 344
+ CC + +TL+ I T R LQT+S
Sbjct: 388 QHCCGNRATLEKILTFGRYLQTMS 411
>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
Length = 1507
Score = 27.5 bits (58), Expect = 4.3
Identities = 24/81 (29%), Positives = 34/81 (41%)
Frame = +1
Query: 31 VHTYKCNNVAQPQLLPERIPGS*TS*RRSCQQLAVPHHSSRAPGS*GPKGAWPHRELPAS 210
++T++ N + +P R P T+ + S P S GP P R+ P S
Sbjct: 385 LNTFRNNIRNRKDSMPPRPPKPSTNGQASVDGQLKPPSSPSPRRQTGPPSPKPSRQPPPS 444
Query: 211 SPQPSNEGTS*PRLP*YPYET 273
SPQ T R P + YET
Sbjct: 445 SPQ-RIAPTPGHRRPVFMYET 464
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 77 PNGYQDPKH-PEEEVVSNWPYRTTPLVLPGAKVRREPGP 190
P+ + P+H P+ E + Y++TP+ P K R P P
Sbjct: 432 PDSHALPQHTPQGEDLGQAAYQSTPISKPSVKSRLGPRP 470
>SB_4754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 850
Score = 27.1 bits (57), Expect = 5.7
Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Frame = +2
Query: 77 PNGYQDPKHPEEEVVSNWPYRTTP---LVLPGAKVRREPGPTESYLRHHPNPAMRAPPNH 247
P Y+ P P + P+ TP + + + R T + HH P M+ PP
Sbjct: 281 PPAYRRPPRPPK-----LPFGCTPENNVKMRAWLLERYASSTFNTCPHHALPCMKGPPVE 335
Query: 248 DYRDTLMKQKVLHKQFNSPIN 310
+ D K H N P++
Sbjct: 336 IHVDPTATPKACHTPANIPLH 356
>SB_48142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 27.1 bits (57), Expect = 5.7
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 187 PHRELPASSPQPSNEGTS 240
PH+ P PQP NEG S
Sbjct: 268 PHQPAPGIPPQPMNEGNS 285
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 27.1 bits (57), Expect = 5.7
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 233 APPNHDYRDTLMKQKVLHKQFNSPINLYSEQNI 331
+PP HD++DT+ ++ + +S L ++NI
Sbjct: 796 SPPKHDFQDTISSRRTDFLETDSQSRLDGKENI 828
>SB_56839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 270 NKRCCTSNSTLQSIYTRNRTLQTLSGSKLRLCQLTAITDGRT 395
N ++ ST +S T RT+ + S ++ R+C++ T GR+
Sbjct: 147 NTSSSSNVSTTRSPVTVARTITSQSSNRQRVCEIFGNTSGRS 188
>SB_30915| Best HMM Match : cNMP_binding (HMM E-Value=6.3e-10)
Length = 673
Score = 26.6 bits (56), Expect = 7.6
Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +2
Query: 164 AKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQ-----KVLHKQFNSPINLYSEQN 328
A R P P+ + H P+P + P + + L + K + +++++PI+ +Q+
Sbjct: 556 ASSSRSPSPSTRRISHTPSPVLTELPEENEDEVLEYEKYEAGKAIPEKWHTPIHEARDQS 615
Query: 329 IAN 337
+A+
Sbjct: 616 LAH 618
>SB_30758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 26.6 bits (56), Expect = 7.6
Identities = 18/64 (28%), Positives = 25/64 (39%)
Frame = +2
Query: 68 NFFPNGYQDPKHPEEEVVSNWPYRTTPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNH 247
N G+ D H + Y ++L R+EPG E+ LRH P + P H
Sbjct: 302 NAHDRGHFDHVHHTDGTCDRCDYYRVKMLLEYLN-RQEPGLGEATLRHLLRPRVDPPHEH 360
Query: 248 DYRD 259
D
Sbjct: 361 PAYD 364
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 26.6 bits (56), Expect = 7.6
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 212 HPNPAMRAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLP 367
HPN + PP Y+ M+ +++ Q P++ + S R SP P
Sbjct: 2131 HPNSQAQQPPGQHYQAKQMQPRLMSPQAPPPMSPQQGGLPSQSPRPVMSPQP 2182
>SB_4748| Best HMM Match : RVT_1 (HMM E-Value=0.0022)
Length = 1012
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +2
Query: 209 HHPNPAMRAPPNHDYRDTLMKQKVLHKQFNSPIN 310
HH P M+ PP + D K H N P++
Sbjct: 273 HHALPCMKGPPVEIHVDPTATPKACHTPANIPLH 306
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 220 VGVMTQVTLCGARLPSDLSSREHERSGAVRPVAD 119
+G +T C ARL SD S+R+ E +P A+
Sbjct: 1738 IGPGGAITTCHARLTSDCSTRKEEEYLTSQPYAN 1771
>SB_56374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 483
Score = 26.6 bits (56), Expect = 7.6
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +2
Query: 242 NHDYRDTLMKQKVLHKQFNSP----INLYSE-QNIANSIRQQTSPLPTNGH 379
+ +Y D L KQ+V ++FN+ NLY+ Q+ +++Q+T L H
Sbjct: 78 HQEYMDALNKQEVAEQEFNTMKEQYKNLYNTFQSEVETVKQETELLGKKRH 128
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 290 QFNSPINLYSEQNIANSIRQQTSPLPTN 373
Q P+ QN+AN RQ++ P P N
Sbjct: 15 QLAFPVIFPPRQNVANQTRQRSPPAPPN 42
>SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 26.6 bits (56), Expect = 7.6
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 170 VRREPGPTE--SYLRHHPNPAMRAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSI 343
V ++PG + S + P+P ++ PP L +Q++ Q S + +Q +
Sbjct: 1070 VPQQPGTPQPASQPQQKPSPTIQQPPQQGQPAQLQQQQLQKPQQQSQPQIAQQQQLHEMQ 1129
Query: 344 RQQ 352
RQQ
Sbjct: 1130 RQQ 1132
>SB_4826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 26.6 bits (56), Expect = 7.6
Identities = 26/100 (26%), Positives = 39/100 (39%)
Frame = +2
Query: 77 PNGYQDPKHPEEEVVSNWPYRTTPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHDYR 256
P+G +PK E ++ SN Y+ P V+ K + G + LR P P +
Sbjct: 5 PDGMVEPK--ENKLASN-AYKPKPEVMLANKQSFDKGGRQPALRLRDKPTFAKP----FD 57
Query: 257 DTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNG 376
D L ++L Y+E + T P P NG
Sbjct: 58 DNLFVNRLL----------YAETGFKADFKDHTFPSPVNG 87
>SB_34869| Best HMM Match : Phage_integrase (HMM E-Value=0.087)
Length = 897
Score = 26.2 bits (55), Expect = 10.0
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = +2
Query: 86 YQDPKHPEEEVVSNWPYR---TTPLVLPGAKVRREPGPTESYLRHHP 217
Y D HP E S+ + ++P LPG K R P L +HP
Sbjct: 279 YCDGNHPVRECPSSAEQKRKASSPEPLPGKKSRTRPEAFARELAYHP 325
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 199 LPASSPQPSNEGTS*PRLP*YPYETKGVAQ 288
LP +S P++EGTS +P+ KGV Q
Sbjct: 990 LPPASCMPTHEGTSNGACCFFPFTYKGVEQ 1019
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 26.2 bits (55), Expect = 10.0
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 248 DYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 373
DY D + + K NS LY E N +S TSP P N
Sbjct: 1355 DYADIGLPKGPRVKLLNSTRRLYPEVNEFSSATTPTSPPPPN 1396
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 26.2 bits (55), Expect = 10.0
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = -1
Query: 400 DNVRPSVMAVSWQRRSLLPDRVCNVLFRV*IDWRVEL 290
DN + A W ++ ++ + +C+ L ++ I W++ L
Sbjct: 138 DNAKTFFAASKWIKKIVMSEELCDYLAKLNIVWKLNL 174
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,260,953
Number of Sequences: 59808
Number of extensions: 306141
Number of successful extensions: 1066
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 715479706
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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