Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0907
(403 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 36 0.011
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 36 0.011
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 36 0.011
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 36 0.011
Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical pr... 36 0.011
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 36 0.011
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 36 0.011
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 36 0.011
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 36 0.011
Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical pr... 36 0.011
Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical p... 36 0.011
Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical pr... 36 0.011
AL117202-1|CAB55091.2| 454|Caenorhabditis elegans Hypothetical ... 33 0.10
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 33 0.10
U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical pr... 31 0.41
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 30 0.54
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 30 0.54
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 29 1.2
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 28 2.2
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 28 2.2
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 28 2.2
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 28 2.2
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein. 28 2.9
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein... 28 2.9
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein... 28 2.9
U00049-6|AAM22030.1| 711|Caenorhabditis elegans Hypothetical pr... 27 5.0
AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical... 27 5.0
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 27 6.7
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 27 6.7
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 27 6.7
U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 26 8.8
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 272 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 373
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 136 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 272 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 373
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 136 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 272 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 373
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 65 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 98
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 272 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 373
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 136 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 272 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 373
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 136 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 272 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 373
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 136 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 272 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 373
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 136 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 272 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 373
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 65 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 98
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 272 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 373
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 136 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 272 QKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 373
Q+V H Q+NSP+ +YS+++ A QQT L N
Sbjct: 136 QRVKHMQYNSPLGIYSDKSAAEQYVQQTQGLGDN 169
>Z48717-10|CAA88612.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 278 VLHKQFNSPINLYSEQNIANSIRQQTSPLP 367
V H Q+NSP+NLYS + A + QQT +P
Sbjct: 341 VHHLQYNSPMNLYSSEATAEQLYQQTGAVP 370
>Z48584-9|CAA88478.2| 423|Caenorhabditis elegans Hypothetical
protein ZK1321.4 protein.
Length = 423
Score = 35.9 bits (79), Expect = 0.011
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 278 VLHKQFNSPINLYSEQNIANSIRQQTSPLP 367
V H Q+NSP+NLYS + A + QQT +P
Sbjct: 341 VHHLQYNSPMNLYSSEATAEQLYQQTGAVP 370
>AL117202-1|CAB55091.2| 454|Caenorhabditis elegans Hypothetical
protein Y47D3A.1 protein.
Length = 454
Score = 32.7 bits (71), Expect = 0.10
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 349 LPDRVCNVLFRV*IDWRVELLVQHLLFHKGITVVVVRRCPHCWVGV 212
L R+ N F I + + Q ++FHK ++RRCP+C V +
Sbjct: 46 LKSRLVNKAFNFGIIHSIRIEHQTVIFHKPTRCDIIRRCPNCTVNL 91
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 32.7 bits (71), Expect = 0.10
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Frame = +2
Query: 53 MSLNPNFFPNGYQDPKHPEEEVVSNWPYRTTPLVLPGAKVRREPGPTESYLRHHPNPAM- 229
M+ +PNFF QD E+V+S T LVL +K+ + E+ ++
Sbjct: 1 MARDPNFFVYSIQDA----EKVISRSTNSETTLVLLNSKL--DSSRIENLIQPDSTKLQF 54
Query: 230 -RAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQN 328
R P++DY DT ++ F +PI +S N
Sbjct: 55 YRGIPDYDYNDTQSERAAQSLIFANPIKSWSSGN 88
>U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical
protein C25G6.3 protein.
Length = 532
Score = 30.7 bits (66), Expect = 0.41
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 170 VRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVLHKQFN 298
++ P PT+ NP +AP N ++R+ L+ H+ +N
Sbjct: 57 LKPSPTPTQENTETPENPPEKAPENANFREWLLDNLSYHRNYN 99
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 30.3 bits (65), Expect = 0.54
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 275 KVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 373
+ +H Q+NSP+ LYS++ +QQ P +
Sbjct: 3 QTVHLQYNSPMGLYSKEAAVEQFQQQIGETPND 35
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 30.3 bits (65), Expect = 0.54
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 275 KVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 373
+ +H Q+NSP+ LYS++ +QQ P +
Sbjct: 122 QTVHLQYNSPMGLYSKEAAVEQFQQQIGETPND 154
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 29.1 bits (62), Expect = 1.2
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Frame = +2
Query: 95 PKHPEEE-----VVSNWPYRT---TPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHD 250
PK P++E ++ P RT TPL AK + P P + P APP +
Sbjct: 338 PKAPQKENKEGGEMTETPRRTITKTPLKTVNAKAKTSPTPPVERQKKERKPLYVAPPAKE 397
Query: 251 YRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTS----PLPTNGHYG 385
+ ++K+ K SP ++ + +SI +S P PT+ G
Sbjct: 398 RVE--KEKKIPSKPVVSPPTTAEKKPVVSSIPSTSSASKGPFPTSSFAG 444
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 29.1 bits (62), Expect = 1.2
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Frame = +2
Query: 95 PKHPEEE-----VVSNWPYRT---TPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHD 250
PK P++E ++ P RT TPL AK + P P + P APP +
Sbjct: 406 PKAPQKENKEGGEMTETPRRTITKTPLKTVNAKAKTSPTPPVERQKKERKPLYVAPPAKE 465
Query: 251 YRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTS----PLPTNGHYG 385
+ ++K+ K SP ++ + +SI +S P PT+ G
Sbjct: 466 RVE--KEKKIPSKPVVSPPTTAEKKPVVSSIPSTSSASKGPFPTSSFAG 512
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 1.2
Identities = 26/85 (30%), Positives = 29/85 (34%), Gaps = 3/85 (3%)
Frame = +2
Query: 2 PGCRNSARGTSIPTSVTMSLNPNFFPNGYQDPKHPEEEVVSNWPYRTTPLVLPGAKVRRE 181
P S G P V S +P P P +E + P P PG RR
Sbjct: 200 PSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDP--PGPPGPPGPPTRRP 257
Query: 182 PGPTESYLRH---HPNPAMRAPPNH 247
PGP R P P R PP H
Sbjct: 258 PGPPGPPTRRPPGPPGPPTRRPPGH 282
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 28.3 bits (60), Expect = 2.2
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +2
Query: 260 TLMKQKVL--HKQFNSPINLYSEQNIANSIRQQT 355
+L+KQ +L H +F+ I+LY++ + ANSI T
Sbjct: 1446 SLLKQSLLRSHARFDPDISLYAQNHTANSIGDVT 1479
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 28.3 bits (60), Expect = 2.2
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +2
Query: 260 TLMKQKVL--HKQFNSPINLYSEQNIANSIRQQT 355
+L+KQ +L H +F+ I+LY++ + ANSI T
Sbjct: 1446 SLLKQSLLRSHARFDPDISLYAQNHTANSIGDVT 1479
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 28.3 bits (60), Expect = 2.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 293 FNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPH 394
F+S N + + +S+ Q PLP HY RPH
Sbjct: 6 FSSRRNCFPCAPLYSSLLAQCVPLPLQHHYHRPH 39
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 28.3 bits (60), Expect = 2.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 145 SSRAPGS*GPKGAWPHRELPASSPQPSNEG 234
S+ A GS GP G+ PH + P PSN G
Sbjct: 45 STSAGGSGGPSGSTPHPQ-GTPQPAPSNNG 73
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 28.3 bits (60), Expect = 2.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 145 SSRAPGS*GPKGAWPHRELPASSPQPSNEG 234
S+ A GS GP G+ PH + P PSN G
Sbjct: 45 STSAGGSGGPSGSTPHPQ-GTPQPAPSNNG 73
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 28.3 bits (60), Expect = 2.2
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +2
Query: 260 TLMKQKVL--HKQFNSPINLYSEQNIANSIRQQT 355
+L+KQ +L H +F+ I+LY++ + ANSI T
Sbjct: 1446 SLLKQSLLRSHARFDPDISLYAQNHTANSIGDVT 1479
>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 263 LMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPHVVK 403
L KQ L + N+ S++++ + + P+PT +Y PHV K
Sbjct: 573 LQKQVHLGLYAHGVDNISSDRDVQSIVGHHYPPMPTVANYDIPHVPK 619
>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 263 LMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPHVVK 403
L KQ L + N+ S++++ + + P+PT +Y PHV K
Sbjct: 573 LQKQVHLGLYAHGVDNISSDRDVQSIVGHHYPPMPTVANYDIPHVPK 619
>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
Length = 1440
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 263 LMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPHVVK 403
L KQ L + N+ S++++ + + P+PT +Y PHV K
Sbjct: 573 LQKQVHLGLYAHGVDNISSDRDVQSIVGHHYPPMPTVANYDIPHVPK 619
>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 263 LMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPHVVK 403
L KQ L + N+ S++++ + + P+PT +Y PHV K
Sbjct: 573 LQKQVHLGLYAHGVDNISSDRDVQSIVGHHYPPMPTVANYDIPHVPK 619
>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 263 LMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRPHVVK 403
L KQ L + N+ S++++ + + P+PT +Y PHV K
Sbjct: 573 LQKQVHLGLYAHGVDNISSDRDVQSIVGHHYPPMPTVANYDIPHVPK 619
>U00049-6|AAM22030.1| 711|Caenorhabditis elegans Hypothetical
protein C18F10.2 protein.
Length = 711
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +3
Query: 282 CTSNSTLQSIYTRNRTLQTLSGSKLRLCQLTAITDGRTLS 401
C + S +++ +T+ +++ SK +LC +A+T LS
Sbjct: 208 CFNISMMKTATVSGQTIGSIACSKFKLCSFSAVTSNPCLS 247
>AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical
protein Y55F3AM.14 protein.
Length = 662
Score = 27.1 bits (57), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +2
Query: 284 HKQFNSPINLYSEQ---NIANSIRQQTSPLPTNGHYGRP 391
H+Q P+N+Y++Q N SI TS P ++G P
Sbjct: 489 HQQIPPPVNIYAQQPPPNPLGSILGNTSLTPQTLNFGLP 527
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 26.6 bits (56), Expect = 6.7
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
Frame = +2
Query: 104 PEEEVVSNWPYRTTPLVLPGAKVRREP--GPTESYLRHHPNPAMRAPPNHDYRDTLMKQK 277
PE+ V N P + L +V+R P GP P P +AP + DY + LM
Sbjct: 167 PEKSVYENNPIAPSEL---NVQVKRAPPQGPP-------PPPPPQAPADIDYPERLMSPP 216
Query: 278 VLHKQFN-----SPINLYSEQNIANSIRQQTS 358
H+ + S YS+ N+ S Q+S
Sbjct: 217 PTHQPRSILKGYSSQQYYSQTNLTESHHHQSS 248
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 71 FFPNGYQDPKHPEEEVVSNWPYRTTPLVLP 160
F P G P VVS +P+R+ P+V P
Sbjct: 40 FRPAGNVYIAQPNPRVVSQYPFRSAPVVRP 69
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 26.6 bits (56), Expect = 6.7
Identities = 18/74 (24%), Positives = 28/74 (37%)
Frame = +2
Query: 20 ARGTSIPTSVTMSLNPNFFPNGYQDPKHPEEEVVSNWPYRTTPLVLPGAKVRREPGPTES 199
A G + V +++P+ P+ P P P + L P P P+
Sbjct: 36 ALGVLVLVLVAHAVDPSDLPDPSSPPPAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGP 95
Query: 200 YLRHHPNPAMRAPP 241
R HP+P+ R P
Sbjct: 96 PHRPHPHPSRRPRP 109
>U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical protein
T28D9.7 protein.
Length = 982
Score = 26.6 bits (56), Expect = 6.7
Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = +2
Query: 17 SARGTSIPTSVTMSLNP---NFFPNGYQDPKHPEEEVVSNWP-YRTTPLVLPGAKVRREP 184
S T P+ + L+ N P Y D HPE+ N P Y T + RE
Sbjct: 854 SGNSTLTPSEIKNFLDQVQRNSQPPSYHDDHHPEDHYYYNDPNYLTISPPSDRPEDNRE- 912
Query: 185 GPTESYLRHHPNPAMRAPPNHDYRD 259
G T Y + +P RAPP + RD
Sbjct: 913 GSTSGY---YSSP--RAPPQANPRD 932
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical protein
C05C9.3 protein.
Length = 1225
Score = 26.2 bits (55), Expect = 8.8
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +2
Query: 194 ESYLRHHPNPAMRAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTN 373
E ++ +H N R H+ + + KQKV +Q + I Q + RQ +P+
Sbjct: 1002 EKFMMYHQNLQQRLQYEHEQQMQIQKQKV-QEQHHQQIR--HHQMLKQEQRQNHNPMHQI 1058
Query: 374 GHYGRPHVV 400
H+ + +V
Sbjct: 1059 EHFQQHQLV 1067
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,137,904
Number of Sequences: 27780
Number of extensions: 226102
Number of successful extensions: 874
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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