Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0906
(446 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 145 1e-35
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 38 0.004
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 38 0.004
U41279-4|AAK31421.1| 313|Caenorhabditis elegans Helix loop heli... 33 0.095
U41279-6|AAK31423.1| 321|Caenorhabditis elegans Helix loop heli... 33 0.13
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 32 0.17
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 32 0.22
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 32 0.22
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 32 0.22
AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical ... 31 0.38
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical pr... 30 0.88
Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical pr... 30 0.88
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 30 0.88
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 30 0.88
AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA transcri... 29 1.2
AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like tra... 29 1.2
AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying de... 29 1.2
U80454-5|AAB37877.1| 368|Caenorhabditis elegans Hypothetical pr... 29 2.0
U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical pr... 29 2.0
AC024817-40|AAF59577.4| 967|Caenorhabditis elegans Hypothetical... 29 2.0
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 28 2.7
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 28 2.7
U61947-14|ABA29341.1| 413|Caenorhabditis elegans Nuclear hormon... 28 3.6
U61947-13|AAB03131.3| 429|Caenorhabditis elegans Nuclear hormon... 28 3.6
AY204189-1|AAO39193.1| 429|Caenorhabditis elegans nuclear recep... 28 3.6
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 28 3.6
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 27 4.7
L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore nu... 27 4.7
L10986-8|AAA28013.2| 286|Caenorhabditis elegans Hypothetical pr... 27 4.7
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 27 4.7
AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical ... 27 4.7
AF036702-13|AAB88379.2| 648|Caenorhabditis elegans Hypothetical... 27 4.7
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 27 4.7
Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical pr... 27 6.2
X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic int... 27 6.2
U23484-15|AAC46762.1| 299|Caenorhabditis elegans Hypothetical p... 27 6.2
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 27 6.2
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 27 8.2
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 27 8.2
Z47356-5|CAA87418.1| 173|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 27 8.2
Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 27 8.2
Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical p... 27 8.2
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 27 8.2
AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 27 8.2
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 27 8.2
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 145 bits (352), Expect = 1e-35
Identities = 72/108 (66%), Positives = 89/108 (82%)
Frame = +3
Query: 123 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKT 302
E+A+ EE+L+M T+++ SRT LLDNEI+IM+SEV RI+H ++IKENTE+IKVNKT
Sbjct: 19 EDAIDEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKERIKENTERIKVNKT 78
Query: 303 LPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYF 446
LPYLVSNV+ELLD++ EEE GA VDLD+Q K KCAVIKTSTR TYF
Sbjct: 79 LPYLVSNVVELLDLEDNTEEE-GANVDLDAQ-KTKCAVIKTSTRATYF 124
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 37.5 bits (83), Expect = 0.004
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Frame = +3
Query: 21 WVQVLLNLKDYYEKTNHNITMATTLEDKSIWE-DGEEALSEEVLRMPTDEIVSRTRLLDN 197
W ++Y EK NH + A++ D I + E+ EE L E R
Sbjct: 508 WKNRAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASE 567
Query: 198 EIKIMKSEVMRISHELQAQNDKIKENTEKI 287
+++MK E+ S Q +KE + +
Sbjct: 568 SVRVMKREMTEASITSDRQIQSLKEKVDSL 597
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 37.5 bits (83), Expect = 0.004
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Frame = +3
Query: 21 WVQVLLNLKDYYEKTNHNITMATTLEDKSIWE-DGEEALSEEVLRMPTDEIVSRTRLLDN 197
W ++Y EK NH + A++ D I + E+ EE L E R
Sbjct: 508 WKNRAEKAEEYIEKENHRVQNASSSHDADITRLENEKTQMEEALEKADQEKDQAIREASE 567
Query: 198 EIKIMKSEVMRISHELQAQNDKIKENTEKI 287
+++MK E+ S Q +KE + +
Sbjct: 568 SVRVMKREMTEASITSDRQIQSLKEKVDSL 597
>U41279-4|AAK31421.1| 313|Caenorhabditis elegans Helix loop helix
protein 25 protein.
Length = 313
Score = 33.1 bits (72), Expect = 0.095
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +3
Query: 45 KDYYEKTNHNITMATTLEDKSIWEDGEEA-LSEEVLRMPTDEIVSRTRLLDNEIKIMKSE 221
K E+ NIT E K+I + EE +S+EV+ ++V+ L N SE
Sbjct: 67 KSASERKRRNITNELINECKTIVQKSEEEHISQEVVLFRIVKLVTGVNLESNFSSNDLSE 126
Query: 222 VMRISHELQAQNDKIKENTEKIKVNK 299
R + +++ K+K EKI+ K
Sbjct: 127 STRRKFDTESERRKVKTEREKIRRKK 152
>U41279-6|AAK31423.1| 321|Caenorhabditis elegans Helix loop helix
protein 27 protein.
Length = 321
Score = 32.7 bits (71), Expect = 0.13
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 57 EKTNHNITMATTLEDKSIWEDGEEA-LSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRI 233
E+ NIT E K+I + EE +S+EV+ ++V+ L N SE R
Sbjct: 79 ERKRRNITNELINECKTIVQKSEEEHISQEVVLFRIVKLVTGVNLESNFSSNDLSESTRR 138
Query: 234 SHELQAQNDKIKENTEKIKVNK 299
+ +++ K+K EKI+ K
Sbjct: 139 KFDTESERRKVKTEREKIRRKK 160
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 32.3 bits (70), Expect = 0.17
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +3
Query: 57 EKTNHNITMATTLEDKSIWEDG--EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMR 230
E N+ T+A ++ I +EAL+++ + P DEIV+ + E+K +++
Sbjct: 487 EDRNYESTIAQLKDEIQILNKRLEDEALAQQQQK-PKDEIVAESEKKLKELKERNKQLVM 545
Query: 231 ISHELQAQNDKIKENTEKIKVNK 299
E+Q + D I ++ +++ V K
Sbjct: 546 EKSEIQRELDNINDHLDQVLVEK 568
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 31.9 bits (69), Expect = 0.22
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = +3
Query: 45 KDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEV 224
+DY EK N ++D+ W+D +E+ + TD R+ E K +++
Sbjct: 1201 RDYDEKINSLYGQNQKIKDE--WDDFRNDADKEIQKWKTDAYTVRS-----EAKALETTN 1253
Query: 225 MRISHELQAQNDKIKENTEKI 287
+ +LQA ND+I T+ +
Sbjct: 1254 TALKAQLQAANDRIDHLTKTV 1274
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 31.9 bits (69), Expect = 0.22
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = +3
Query: 45 KDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEV 224
+DY EK N ++D+ W+D +E+ + TD R+ E K +++
Sbjct: 1274 RDYDEKINSLYGQNQKIKDE--WDDFRNDADKEIQKWKTDAYTVRS-----EAKALETTN 1326
Query: 225 MRISHELQAQNDKIKENTEKI 287
+ +LQA ND+I T+ +
Sbjct: 1327 TALKAQLQAANDRIDHLTKTV 1347
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 31.9 bits (69), Expect = 0.22
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = +3
Query: 45 KDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEV 224
+DY EK N ++D+ W+D +E+ + TD R+ E K +++
Sbjct: 1274 RDYDEKINSLYGQNQKIKDE--WDDFRNDADKEIQKWKTDAYTVRS-----EAKALETTN 1326
Query: 225 MRISHELQAQNDKIKENTEKI 287
+ +LQA ND+I T+ +
Sbjct: 1327 TALKAQLQAANDRIDHLTKTV 1347
>AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical
protein Y87G2A.1 protein.
Length = 780
Score = 31.1 bits (67), Expect = 0.38
Identities = 27/111 (24%), Positives = 50/111 (45%)
Frame = +3
Query: 78 TMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQN 257
T+ E+ +I ED E + EEV+ + T +++ + + +SE + + HE+
Sbjct: 6 TVIKNAEEIAIQED--EEIIEEVIEEEQVPWLGPTDVMEGQGEYYQSEEL-LEHEMVEYE 62
Query: 258 DKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKC 410
D + + + PY N+ +LL Q ++ G +V L S KC
Sbjct: 63 DA-EPYQSFLPIRDGAPYFSLNLPDLLSKAHQITQDTGVIVRLTSCFNKKC 112
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 30.7 bits (66), Expect = 0.50
Identities = 17/62 (27%), Positives = 35/62 (56%)
Frame = +3
Query: 117 DGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVN 296
D + L+ + +M DE++ RT++ I ++ + ++++ EL+ + KIKE+ E K
Sbjct: 1587 DHMDTLTIKAEQMSDDEVI-RTKVAVTAIDQLRKKWLKMNEELKKMHQKIKESIEFTKFV 1645
Query: 297 KT 302
T
Sbjct: 1646 ST 1647
>Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical protein
H40L08.3 protein.
Length = 1026
Score = 29.9 bits (64), Expect = 0.88
Identities = 23/90 (25%), Positives = 38/90 (42%)
Frame = +3
Query: 27 QVLLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIK 206
Q+ + + EK N T+ E K G ++E+ + L IK
Sbjct: 783 QIRKSFRQLEEKQNEIKTIKDDAERKHRDMIGSFHITEKQFSIKAANNQLEIENLKKTIK 842
Query: 207 IMKSEVMRISHELQAQNDKIKENTEKIKVN 296
+K E ++ EL A D+ + NT+K+K N
Sbjct: 843 ELKFETLKKHEELGALRDEKEANTQKLKEN 872
>Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical protein
H40L08.3 protein.
Length = 1026
Score = 29.9 bits (64), Expect = 0.88
Identities = 23/90 (25%), Positives = 38/90 (42%)
Frame = +3
Query: 27 QVLLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIK 206
Q+ + + EK N T+ E K G ++E+ + L IK
Sbjct: 783 QIRKSFRQLEEKQNEIKTIKDDAERKHRDMIGSFHITEKQFSIKAANNQLEIENLKKTIK 842
Query: 207 IMKSEVMRISHELQAQNDKIKENTEKIKVN 296
+K E ++ EL A D+ + NT+K+K N
Sbjct: 843 ELKFETLKKHEELGALRDEKEANTQKLKEN 872
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 29.9 bits (64), Expect = 0.88
Identities = 20/79 (25%), Positives = 40/79 (50%)
Frame = +3
Query: 129 ALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLP 308
AL E L++ T+ L +I+++KSE R+S ++Q ++ +N EK+ ++ L
Sbjct: 280 ALQSEKLKL-TEISQQEISGLKKKIEVLKSENHRLSSQIQQNTNEAAKNHEKLLEDRVLL 338
Query: 309 YLVSNVIELLDVDPQEEEE 365
+E+ D+ E +
Sbjct: 339 LETRYQLEVDDLKKSFESD 357
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 29.9 bits (64), Expect = 0.88
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Frame = +3
Query: 3 RWRARGWVQVLLNLKDYYEKT-NHNITMATTLEDKSIWE-DGEEALSEEVLRMPTDEIVS 176
R R G +LNL+ EK +H L + + E + + E +R+ EI
Sbjct: 584 RERITGKDAEILNLRKQLEKEISHTEDRNRLLHENTQKELEAHKETHTETVRVLEAEIDQ 643
Query: 177 RTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIK-VNKTLPYLVSNVIELLD 341
+NE + K + +I EL+AQN + EK+K V + L S+ LL+
Sbjct: 644 FKSAFENEQEYGKEKSAKI-RELEAQNKTLLSEMEKVKHVAENLEAFTSDKDNLLE 698
>AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA
transcription factor EGL-18A protein.
Length = 358
Score = 29.5 bits (63), Expect = 1.2
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 117 DGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDK-IKENTE 281
+ E EVL+ P+DE S + L ++ S VM +LQ + D+ +KEN E
Sbjct: 12 ESAEQQHHEVLQRPSDEPCSGCKQLQKDVAKTISMVMERMDKLQYRLDELLKENNE 67
>AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like
transcription factorELT-5 protein.
Length = 376
Score = 29.5 bits (63), Expect = 1.2
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 117 DGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDK-IKENTE 281
+ E EVL+ P+DE S + L ++ S VM +LQ + D+ +KEN E
Sbjct: 12 ESAEQQHHEVLQRPSDEPCSGCKQLQKDVAKTISMVMERMDKLQYRLDELLKENNE 67
>AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying
defective protein 18 protein.
Length = 376
Score = 29.5 bits (63), Expect = 1.2
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 117 DGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDK-IKENTE 281
+ E EVL+ P+DE S + L ++ S VM +LQ + D+ +KEN E
Sbjct: 12 ESAEQQHHEVLQRPSDEPCSGCKQLQKDVAKTISMVMERMDKLQYRLDELLKENNE 67
>U80454-5|AAB37877.1| 368|Caenorhabditis elegans Hypothetical
protein T16A1.8 protein.
Length = 368
Score = 28.7 bits (61), Expect = 2.0
Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = +3
Query: 96 EDKSIWEDGEEALSEEVLRMPTDEIV---SRTRLLDNEIKIMKSEVMRISHELQAQNDKI 266
+ KSI E L V ++ +EIV T +DN++ K+ + I H ++ N ++
Sbjct: 178 KSKSILIQNLEELQFNVSKVTLNEIVLVNCSTITIDNQVISDKNLNLFIKHWIKGSNCQL 237
Query: 267 KENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTST 431
K I+ + L ++ ++ E + +EE++ ++ K V+ + T
Sbjct: 238 KSFEYHIRPTERLRFVEVSLFEGIGYMEKEEDDHWKRFEIKRNDGTKATVLLSKT 292
>U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical
protein C23G10.6 protein.
Length = 540
Score = 28.7 bits (61), Expect = 2.0
Identities = 15/61 (24%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 33 LLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSR-TRLLDNEIKI 209
+ +L D + HN+T + D++ ++++V+ + DEI+SR T ++D+ + +
Sbjct: 75 MAHLADTLTEAGHNVTFLIPVADETRKNQLGVKITKDVVLVEQDEIMSRDTLIVDDHMDM 134
Query: 210 M 212
M
Sbjct: 135 M 135
>AC024817-40|AAF59577.4| 967|Caenorhabditis elegans Hypothetical
protein Y54G2A.21 protein.
Length = 967
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +3
Query: 165 EIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKV 293
E + + ++L I+ +K+E IS E+Q QND +E+I++
Sbjct: 141 EQIPQIKMLRLTIERLKNEKNEISEEIQKQNDAFAVFSEEIQI 183
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 28.3 bits (60), Expect = 2.7
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +3
Query: 126 EALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTL 305
+ LS+E +E+ E K + M L +D + + + K KT
Sbjct: 1123 DLLSDEQFMKQVEEVEDENNQAVAERKKQRKRKMA---GLDENDDSMDDVVLQHKKKKTD 1179
Query: 306 PYLVSNVIELLDVDPQEEEEDGAVV 380
P L + E+LDV + + EDG ++
Sbjct: 1180 PELAEKINEMLDVILEYKNEDGELI 1204
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 28.3 bits (60), Expect = 2.7
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +3
Query: 126 EALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTL 305
+ LS+E +E+ E K + M L +D + + + K KT
Sbjct: 1123 DLLSDEQFMKQVEEVEDENNQAVAERKKQRKRKMA---GLDENDDSMDDVVLQHKKKKTD 1179
Query: 306 PYLVSNVIELLDVDPQEEEEDGAVV 380
P L + E+LDV + + EDG ++
Sbjct: 1180 PELAEKINEMLDVILEYKNEDGELI 1204
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 28.3 bits (60), Expect = 2.7
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +3
Query: 126 EALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTL 305
+ LS+E +E+ E K + M L +D + + + K KT
Sbjct: 1123 DLLSDEQFMKQVEEVEDENNQAVAERKKQRKRKMA---GLDENDDSMDDVVLQHKKKKTD 1179
Query: 306 PYLVSNVIELLDVDPQEEEEDGAVV 380
P L + E+LDV + + EDG ++
Sbjct: 1180 PELAEKINEMLDVILEYKNEDGELI 1204
>U61947-14|ABA29341.1| 413|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 105, isoform b protein.
Length = 413
Score = 27.9 bits (59), Expect = 3.6
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +3
Query: 54 YEKTNHNITMATTLEDKSIWEDGEEA-LSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMR 230
Y H + A K++W + L E +P + T + NE +++ S
Sbjct: 228 YTVIEHGLFTAQMPYHKNVWFLSDRTCLVSEFENLPQEIKKHLTPKVINEQQLLASFTEM 287
Query: 231 ISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEED 368
+ HE+ ++K ++ ++ KTL L + +D D E D
Sbjct: 288 LIHEVADPLRRLKPDSVEVATVKTLMLLKPTCLREIDGDYLSTETD 333
>U61947-13|AAB03131.3| 429|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 105, isoform a protein.
Length = 429
Score = 27.9 bits (59), Expect = 3.6
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +3
Query: 54 YEKTNHNITMATTLEDKSIWEDGEEA-LSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMR 230
Y H + A K++W + L E +P + T + NE +++ S
Sbjct: 244 YTVIEHGLFTAQMPYHKNVWFLSDRTCLVSEFENLPQEIKKHLTPKVINEQQLLASFTEM 303
Query: 231 ISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEED 368
+ HE+ ++K ++ ++ KTL L + +D D E D
Sbjct: 304 LIHEVADPLRRLKPDSVEVATVKTLMLLKPTCLREIDGDYLSTETD 349
>AY204189-1|AAO39193.1| 429|Caenorhabditis elegans nuclear receptor
NHR-105 protein.
Length = 429
Score = 27.9 bits (59), Expect = 3.6
Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Frame = +3
Query: 54 YEKTNHNITMATTLEDKSIWEDGEEA-LSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMR 230
Y H + A K++W + L E +P + T + NE +++ S
Sbjct: 244 YTVIEHGLFTAQMPYHKNVWFLSDRTCLVSEFENLPQEIKKHLTPKVINEQQLLASFTEM 303
Query: 231 ISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEED 368
+ HE+ ++K ++ ++ KTL L + +D D E D
Sbjct: 304 LIHEVADPLRRLKPDSVEVATVKTLMLLKPTCLREIDGDYLSTETD 349
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 27.9 bits (59), Expect = 3.6
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = +3
Query: 96 EDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKEN 275
++K E+ E+ + E E R + ++K + + +++ + +K+K
Sbjct: 888 KEKEAEEENEKLIPERKRMEAIKEEEERVKAEREKVKKEEERLKAEEEKVKVEKEKVKAE 947
Query: 276 TEKIKVNK 299
EK+KV K
Sbjct: 948 EEKVKVEK 955
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 4.7
Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = +3
Query: 159 TDEIVSRTRLLDNEIKIMKSEVMRISHELQ-----AQNDKIKENTEKIKVNKTLPYLVSN 323
T + + RLL EI ++ EV +S L+ A+ K K + ++K L ++ ++
Sbjct: 549 TSKSIETERLLQGEIVALQKEVSIVSESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS 608
Query: 324 VIELLDVD-PQEEEEDGAVVDLDSQRKGKCAVIKTSTRQ 437
+ +++ +E E+ + +L+ QR ++I+ R+
Sbjct: 609 RKRIAELELSSKESENRSSEELEEQRLYYVSMIEDLERK 647
>L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore null
protein 1 protein.
Length = 1010
Score = 27.5 bits (58), Expect = 4.7
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 204 KIMKSEVMRISHELQAQNDKIKENTEKIKVNKT 302
+I+++E M++ HE+ + N + + EKI + KT
Sbjct: 820 RIVENEKMKVQHEIDSLNSTNQLSAEKIDMLKT 852
>L10986-8|AAA28013.2| 286|Caenorhabditis elegans Hypothetical
protein F10E9.2 protein.
Length = 286
Score = 27.5 bits (58), Expect = 4.7
Identities = 29/100 (29%), Positives = 43/100 (43%)
Frame = +3
Query: 69 HNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQ 248
H IT+ T KS E+GE S P + S+TRL D +KI + +++ + + Q
Sbjct: 191 HMITLRT---QKSSSEEGEGEFSGRGDPAPLEVGDSKTRLSD--LKITRHKMLLLDVDDQ 245
Query: 249 AQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEED 368
++ +E EK K NV L P ED
Sbjct: 246 KKDGSGEEKKEKKSAEKEKKISHENVQSL---SPSSRAED 282
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 4.7
Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = +3
Query: 159 TDEIVSRTRLLDNEIKIMKSEVMRISHELQ-----AQNDKIKENTEKIKVNKTLPYLVSN 323
T + + RLL EI ++ EV +S L+ A+ K K + ++K L ++ ++
Sbjct: 549 TSKSIETERLLQGEIVALQKEVSIVSESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS 608
Query: 324 VIELLDVD-PQEEEEDGAVVDLDSQRKGKCAVIKTSTRQ 437
+ +++ +E E+ + +L+ QR ++I+ R+
Sbjct: 609 RKRIAELELSSKESENRSSEELEEQRLYYVSMIEDLERK 647
>AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical
protein Y116A8C.18 protein.
Length = 358
Score = 27.5 bits (58), Expect = 4.7
Identities = 15/74 (20%), Positives = 39/74 (52%)
Frame = +3
Query: 33 LLNLKDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIM 212
+LN+KD+Y+++ + + +K + EE + ++ + +EIV+ +L + I +
Sbjct: 25 MLNVKDWYKQSKLVFMLIVAILEKDV---KEERNATKMAKNLNEEIVNELKLSEELIDCL 81
Query: 213 KSEVMRISHELQAQ 254
+ ++ EL+ +
Sbjct: 82 EKQLQESKIELKEE 95
>AF036702-13|AAB88379.2| 648|Caenorhabditis elegans Hypothetical
protein F33D4.6b protein.
Length = 648
Score = 27.5 bits (58), Expect = 4.7
Identities = 25/125 (20%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Frame = +3
Query: 39 NLKDYYEKTNHNITMATTLEDKSIWEDGEEALSEEVLRMPT-DEIVSRTRLLDNEIKIMK 215
+L D KT +++ E+ + DG + + E R T + V +++ I+
Sbjct: 425 DLYDEQWKTQVAPSVSPPSEEFAEQFDGVDEVQESPKRQETTQQEVQNDTPMNDAIEQRS 484
Query: 216 SEVMRISHELQAQ--NDKIKENTEK-IKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDL 386
S+V ++ E + + N ++++ K I+++K + E P+EEEE+ +
Sbjct: 485 SKVQMLTKEQEEELLNKEVRKRVMKRIRLSKMKTTTTTTTTEAPTTTPEEEEEEVVTAAV 544
Query: 387 DSQRK 401
+ + +
Sbjct: 545 EQEEE 549
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 27.5 bits (58), Expect = 4.7
Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = +3
Query: 159 TDEIVSRTRLLDNEIKIMKSEVMRISHELQ-----AQNDKIKENTEKIKVNKTLPYLVSN 323
T + + RLL EI ++ EV +S L+ A+ K K + ++K L ++ ++
Sbjct: 547 TSKSIETERLLQGEIVALQKEVSIVSESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS 606
Query: 324 VIELLDVD-PQEEEEDGAVVDLDSQRKGKCAVIKTSTRQ 437
+ +++ +E E+ + +L+ QR ++I+ R+
Sbjct: 607 RKRIAELELSSKESENRSSEELEEQRLYYVSMIEDLERK 645
>Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical
protein M162.7 protein.
Length = 690
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +3
Query: 165 EIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVI 329
+++ + R LDN + + EL K+KE ++K+K N LV N +
Sbjct: 467 QVIQKMRNLDNASVENIKGIPSVVSELLQNISKVKEVSDKMKENSNNKTLVMNAL 521
>Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 27.1 bits (57), Expect = 6.2
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 177 RTRLLDNEIKIMKSEVMRISHELQ-AQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQ 353
R L++E+K +K E R+ ELQ A+ D +E +I + L+ + L V
Sbjct: 184 RIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDYQNQVQTLLEEIDFLRRVHDN 243
Query: 354 EEEE 365
E +E
Sbjct: 244 EIKE 247
>Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 27.1 bits (57), Expect = 6.2
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 177 RTRLLDNEIKIMKSEVMRISHELQ-AQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQ 353
R L++E+K +K E R+ ELQ A+ D +E +I + L+ + L V
Sbjct: 192 RIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDYQNQVQTLLEEIDFLRRVHDN 251
Query: 354 EEEE 365
E +E
Sbjct: 252 EIKE 255
>Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 27.1 bits (57), Expect = 6.2
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 177 RTRLLDNEIKIMKSEVMRISHELQ-AQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQ 353
R L++E+K +K E R+ ELQ A+ D +E +I + L+ + L V
Sbjct: 192 RIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDYQNQVQTLLEEIDFLRRVHDN 251
Query: 354 EEEE 365
E +E
Sbjct: 252 EIKE 255
>Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 27.1 bits (57), Expect = 6.2
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 177 RTRLLDNEIKIMKSEVMRISHELQ-AQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQ 353
R L++E+K +K E R+ ELQ A+ D +E +I + L+ + L V
Sbjct: 184 RIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDYQNQVQTLLEEIDFLRRVHDN 243
Query: 354 EEEE 365
E +E
Sbjct: 244 EIKE 247
>Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 27.1 bits (57), Expect = 6.2
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 177 RTRLLDNEIKIMKSEVMRISHELQ-AQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQ 353
R L++E+K +K E R+ ELQ A+ D +E +I + L+ + L V
Sbjct: 192 RIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDYQNQVQTLLEEIDFLRRVHDN 251
Query: 354 EEEE 365
E +E
Sbjct: 252 EIKE 255
>Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 27.1 bits (57), Expect = 6.2
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 177 RTRLLDNEIKIMKSEVMRISHELQ-AQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQ 353
R L++E+K +K E R+ ELQ A+ D +E +I + L+ + L V
Sbjct: 192 RIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDYQNQVQTLLEEIDFLRRVHDN 251
Query: 354 EEEE 365
E +E
Sbjct: 252 EIKE 255
>X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 592
Score = 27.1 bits (57), Expect = 6.2
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 177 RTRLLDNEIKIMKSEVMRISHELQ-AQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQ 353
R L++E+K +K E R+ ELQ A+ D +E +I + L+ + L V
Sbjct: 211 RIAQLEDEVKRIKQENQRLLSELQRARTDLDQETLNRIDYQNQVQTLLEEIDFLRRVHDN 270
Query: 354 EEEE 365
E +E
Sbjct: 271 EIKE 274
>U23484-15|AAC46762.1| 299|Caenorhabditis elegans Hypothetical
protein EEED8.2 protein.
Length = 299
Score = 27.1 bits (57), Expect = 6.2
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +3
Query: 150 RMPTDEIVSRTRLLDNEIKIMKSE---VMRISHELQAQNDKIKENTEKIKVNK 299
+ P E VS L +E+K ++ E + + +L+ ND++K++ EK+ N+
Sbjct: 28 KSPELEEVSTVSDLQDELKSLRLENKDLYSLMEQLKKDNDEMKKSLEKVMKNQ 80
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 339 DVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTR 434
D D +EEEED + D++S R K V T+++
Sbjct: 528 DDDDEEEEEDMEISDIESVRNKKRKVPATTSQ 559
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 339 DVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTR 434
D D +EEEED + D++S R K V T+++
Sbjct: 816 DDDDEEEEEDMEISDIESVRNKKRKVPATTSQ 847
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 26.6 bits (56), Expect = 8.2
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 207 IMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSN---VIELLDVDP 350
+ +SE + + E + K+ +N EKI P+LV + I++ ++DP
Sbjct: 1370 VFRSEKLEMHGEFMQRIMKMYDNPEKIMKTDPCPHLVDSPGRYIQVFNIDP 1420
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical protein
C02F4.1 protein.
Length = 1781
Score = 26.6 bits (56), Expect = 8.2
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 207 IMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSN---VIELLDVDP 350
+ +SE + + E + K+ +N EKI P+LV + I++ ++DP
Sbjct: 1370 VFRSEKLEMHGEFMQRIMKMYDNPEKIMKTDPCPHLVDSPGRYIQVFNIDP 1420
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 267 KENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLD 389
KEN K +NK L + N+ E+ Q E E+G + +LD
Sbjct: 455 KENARKY-LNKALNSVSDNINEIYMYYVQFEREEGTLAELD 494
>Z47356-5|CAA87418.1| 173|Caenorhabditis elegans Hypothetical
protein T15H9.5 protein.
Length = 173
Score = 26.6 bits (56), Expect = 8.2
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +3
Query: 201 IKIMKSEVMRIS--HELQAQNDKIKENTEK-IKVNKTLPYLVSNVIELLDVDPQEEEEDG 371
IK++ + ++ E + ++K++++ +K +K + P LV N L + +E+EE+
Sbjct: 74 IKVLSEKKLKSKKKEEDKEPDEKVEKDVKKEVKADNNEP-LVKN----LKIAKKEQEEEN 128
Query: 372 AVVDLDSQRKGKCAVIKTSTRQ 437
DL+S + A K S RQ
Sbjct: 129 PKTDLESHKDEAEAKKKESRRQ 150
>Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 114 EDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKV 293
E E L++ ++R+ +I DN I +++++ + +D KEN KI +
Sbjct: 649 EKAAELLNKSIVRVEQPDIALDDDDFDNNIMVVEADKENQRGDDSMDHDGEKENAPKIDI 708
Query: 294 NK 299
K
Sbjct: 709 AK 710
>Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 114 EDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKV 293
E E L++ ++R+ +I DN I +++++ + +D KEN KI +
Sbjct: 649 EKAAELLNKSIVRVEQPDIALDDDDFDNNIMVVEADKENQRGDDSMDHDGEKENAPKIDI 708
Query: 294 NK 299
K
Sbjct: 709 AK 710
>Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical
protein ZK632.1b protein.
Length = 516
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 114 EDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKV 293
E E L++ ++R+ +I DN I +++++ + +D KEN KI +
Sbjct: 355 EKAAELLNKSIVRVEQPDIALDDDDFDNNIMVVEADKENQRGDDSMDHDGEKENAPKIDI 414
Query: 294 NK 299
K
Sbjct: 415 AK 416
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 26.6 bits (56), Expect = 8.2
Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Frame = +3
Query: 117 DGEEALSE-EVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKV 293
D EE + E VL+M ++ ++ + +M+ E+M + N ++KE +E++
Sbjct: 164 DLEEIIKEYSVLKMKEEKEKQCLQMASDSWAMMREEIMEKRETNRDLNRQLKEKSEELMQ 223
Query: 294 NKTLPYLVSNVIELLDV----DPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQ 437
+ LV ++L V D +++EE D S + I ++ Q
Sbjct: 224 KSQI--LVETTLKLKAVEEERDKRKKEEQFREADARSNNYARKGEISSNIEQ 273
>AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication
licensing factor MCM2/3/5-type protein protein.
Length = 810
Score = 26.6 bits (56), Expect = 8.2
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +3
Query: 114 EDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKV 293
E E L++ ++R+ +I DN I +++++ + +D KEN KI +
Sbjct: 649 EKAAELLNKSIVRVEQPDIALDDDDFDNNIMVVEADKENQRGDDSMDHDGEKENAPKIDI 708
Query: 294 NK 299
K
Sbjct: 709 AK 710
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 26.6 bits (56), Expect = 8.2
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 207 IMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSN---VIELLDVDP 350
+ +SE + + E + K+ +N EKI P+LV + I++ ++DP
Sbjct: 1370 VFRSEKLEMHGEFMQRIMKMYDNPEKIMKTDPCPHLVDSPGRYIQVFNIDP 1420
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,423,108
Number of Sequences: 27780
Number of extensions: 141188
Number of successful extensions: 671
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -