Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0905
         (465 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_3091| Best HMM Match : No HMM Matches (HMM E-Value=.)               58   3e-09
SB_28191| Best HMM Match : Insulin (HMM E-Value=8.1)                   27   7.7  
SB_12600| Best HMM Match : Insulin (HMM E-Value=8.1)                   27   7.7  
SB_5730| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   7.7  
SB_14528| Best HMM Match : CXCXC (HMM E-Value=8.1)                     27   7.7  

>SB_3091| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 159

 Score = 58.4 bits (135), Expect = 3e-09
 Identities = 32/76 (42%), Positives = 45/76 (59%)
 Frame = +1

Query: 70  LQEKFDQAAANVKNLKALPTDAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWH 249
           +Q+ F QA   V++LK L  D Q L  Y  FKQAT G     +RPG  D+ GKAK+++WH
Sbjct: 13  VQDLFAQATDYVRSLKNL-RDEQKLLFYGLFKQATEGPCK-TSRPGFWDIVGKAKWESWH 70

Query: 250 KLAGTSKEDAQKAYIE 297
           +     +E A K Y++
Sbjct: 71  QHGKMPQEKAMKIYVQ 86


>SB_28191| Best HMM Match : Insulin (HMM E-Value=8.1)
          Length = 175

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +2

Query: 224 VKLNLTLGTNWPALRRRMPRKPTSRSSKVS*LPSASK 334
           ++  + +GTN P LR R+ R+P  + +K   L  AS+
Sbjct: 134 IRDQIVVGTNSPVLRERLLREPELKLTKTINLCRASE 170


>SB_12600| Best HMM Match : Insulin (HMM E-Value=8.1)
          Length = 175

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +2

Query: 224 VKLNLTLGTNWPALRRRMPRKPTSRSSKVS*LPSASK 334
           ++  + +GTN P LR R+ R+P  + +K   L  AS+
Sbjct: 134 IRDQIVVGTNSPVLRERLLREPELKLTKTINLCRASE 170


>SB_5730| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 66

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 14/50 (28%), Positives = 21/50 (42%)
 Frame = +2

Query: 155 PISNRPQLEMPIQPIDLVF*T*RVKLNLTLGTNWPALRRRMPRKPTSRSS 304
           P+S R  L   I+P D +  T    +N     +W +    +  KP S  S
Sbjct: 3   PVSRRDVLRCKIEPCDYLLHTLSKCVNAAASDDWRSCLANLANKPASACS 52


>SB_14528| Best HMM Match : CXCXC (HMM E-Value=8.1)
          Length = 310

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 12/65 (18%)
 Frame = -2

Query: 227 LPFK----SRRPGLLAGSASPT-VACLKWA-------YKLRSWASVGRAFRFFTLAAAWS 84
           LP+K     RR  LL     P  + C++W        Y L SW +   A RF+ ++   +
Sbjct: 69  LPYKLGSHERRQSLLPPRTPPVAITCMRWVATNAASRYYLMSWVATNAASRFYLISWVAT 128

Query: 83  NFSWR 69
           N + R
Sbjct: 129 NAASR 133


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,469,638
Number of Sequences: 59808
Number of extensions: 283613
Number of successful extensions: 581
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 957531822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)