Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0903
         (359 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    75   5e-13
UniRef50_Q752S3 Cluster: AFR500Wp; n=2; Saccharomycetaceae|Rep: ...    33   1.1  
UniRef50_A6QSC5 Cluster: Putative uncharacterized protein; n=1; ...    33   2.0  
UniRef50_Q2SIR5 Cluster: Putative uncharacterized protein; n=1; ...    32   2.6  
UniRef50_A0Z111 Cluster: Putative uncharacterized protein; n=1; ...    32   2.6  
UniRef50_A7AWB2 Cluster: Glutamate-cysteine ligase catalytic sub...    32   3.5  
UniRef50_Q6ZEF1 Cluster: Sll7047 protein; n=1; Synechocystis sp....    31   4.6  
UniRef50_UPI0000E48D5A Cluster: PREDICTED: similar to Transmembr...    31   6.1  
UniRef50_Q9A917 Cluster: Putative uncharacterized protein; n=2; ...    31   8.0  
UniRef50_P33753 Cluster: tRNA (uracil-5-)-methyltransferase (EC ...    31   8.0  

>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 74.5 bits (175), Expect = 5e-13
 Identities = 35/63 (55%), Positives = 42/63 (66%)
 Frame = +2

Query: 170  VLRSHHFYHPTSRHRSRVRPYYLELLAAFIDSAFPKIFSATYQLWNELPSTVFLERYDIS 349
            ++ +  FYH T+RHRSRV PYYLE L +            T +LWNELPSTVF ERYD+S
Sbjct: 898  MIPASRFYHRTARHRSRVHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERYDMS 957

Query: 350  FFK 358
            FFK
Sbjct: 958  FFK 960


>UniRef50_Q752S3 Cluster: AFR500Wp; n=2; Saccharomycetaceae|Rep:
           AFR500Wp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 506

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
 Frame = +3

Query: 48  SEIIVKSFKLLAPRSFTVAKPIKKTLSLN*EKTTPHFKGPRYFVATIFIIPP---LAIGA 218
           S ++ KS  LL+P S      IK+ L       T  F  P Y + T+F+IPP   + +  
Sbjct: 152 SRVVAKSDLLLSPVSVLSGNDIKRLL------LTMVFLSPIYVILTLFVIPPRKFVLVAG 205

Query: 219 EFV---HIIWNCLLRSSTVRFQRSFLL 290
            +V   H  W+ + R    RF+   LL
Sbjct: 206 VYVLTYHSSWSSVTRKLLWRFKLVRLL 232


>UniRef50_A6QSC5 Cluster: Putative uncharacterized protein; n=1;
           Ajellomyces capsulatus NAm1|Rep: Putative
           uncharacterized protein - Ajellomyces capsulatus NAm1
          Length = 424

 Score = 32.7 bits (71), Expect = 2.0
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +2

Query: 188 FYHPTSRHRSRVRPYYLELLAAFIDSAFPKIFSATY 295
           FYHPTS  RS+ RP++ ++    +D AF    S++Y
Sbjct: 115 FYHPTSTWRSQKRPFFTDV----VDDAFDTPHSSSY 146


>UniRef50_Q2SIR5 Cluster: Putative uncharacterized protein; n=1;
           Hahella chejuensis KCTC 2396|Rep: Putative
           uncharacterized protein - Hahella chejuensis (strain
           KCTC 2396)
          Length = 487

 Score = 32.3 bits (70), Expect = 2.6
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +3

Query: 150 PHFKGPRYFVATIFIIPPLAIGAEFVHIIWNCLLRSSTVRFQRSFLLRTSSGMNSPPRCF 329
           P  K P   V    ++P LA+G + + +I    L  + V++  S +  TS G+  PP   
Sbjct: 72  PMAKDPMILVVICTLVP-LALGKDLISLIIAIALFCAQVKYMYSVIETTSKGVLKPPELL 130

Query: 330 SS 335
           S+
Sbjct: 131 SA 132


>UniRef50_A0Z111 Cluster: Putative uncharacterized protein; n=1;
           marine gamma proteobacterium HTCC2080|Rep: Putative
           uncharacterized protein - marine gamma proteobacterium
           HTCC2080
          Length = 350

 Score = 32.3 bits (70), Expect = 2.6
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 191 YHPTSRHRSRVRPYYLELLAAFIDSAFPKIFSATYQLWNELPSTVFLERY 340
           +H T   R RV  +  + L AF+D    ++ +  Y++W +   T  LER+
Sbjct: 99  FHLTEYARERVLHHQDDALVAFLDMFHHRLLTYFYRIWADATPTANLERH 148


>UniRef50_A7AWB2 Cluster: Glutamate-cysteine ligase catalytic
           subunit, putative; n=1; Babesia bovis|Rep:
           Glutamate-cysteine ligase catalytic subunit, putative -
           Babesia bovis
          Length = 685

 Score = 31.9 bits (69), Expect = 3.5
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 191 KNGGYEVPWSLKMRCC 144
           K+GGY +PW ++ RCC
Sbjct: 508 KDGGYPIPWRVEFRCC 523


>UniRef50_Q6ZEF1 Cluster: Sll7047 protein; n=1; Synechocystis sp.
           PCC 6803|Rep: Sll7047 protein - Synechocystis sp.
           (strain PCC 6803)
          Length = 243

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = +3

Query: 15  ARGLFVA*CFASEIIVKSFKLLAPRSFTVAKPIKKTLSL 131
           A GLF A   A  I++ S   LA   FT+ KP+ KTL+L
Sbjct: 55  AEGLFRAGFLADSIMLLSDVALAVLLFTLLKPVNKTLAL 93


>UniRef50_UPI0000E48D5A Cluster: PREDICTED: similar to Transmembrane
            protease, serine 9 (Polyserase-1) (Polyserine protease 1)
            (Polyserase-I); n=1; Strongylocentrotus purpuratus|Rep:
            PREDICTED: similar to Transmembrane protease, serine 9
            (Polyserase-1) (Polyserine protease 1) (Polyserase-I) -
            Strongylocentrotus purpuratus
          Length = 1222

 Score = 31.1 bits (67), Expect = 6.1
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = -2

Query: 310  FIPELVRSRKDLWKRTVDERSKQFQIIWTNSAPMARGGMI 191
            FIP+  R++++LW R +D  S+Q++    +  P   G ++
Sbjct: 1069 FIPQDTRTKQELWSRELDTGSEQWRFGQVDLTPEGSGWLV 1108


>UniRef50_Q9A917 Cluster: Putative uncharacterized protein; n=2;
           Caulobacter|Rep: Putative uncharacterized protein -
           Caulobacter crescentus (Caulobacter vibrioides)
          Length = 210

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = -2

Query: 334 LEKHRGGEFIP--ELVRSRKDLWKRTVDERSKQFQIIWTNSAPMARGGMIKMVATKYRG 164
           L+  R G+  P  ELV +R D+  RTV    K  + ++   + +  G ++ +V T ++G
Sbjct: 40  LDLVREGDISPSAELVATRADVGLRTVFRHFKDLESLYLEMSAVIEGELMSLVHTPFKG 98


>UniRef50_P33753 Cluster: tRNA (uracil-5-)-methyltransferase (EC
           2.1.1.35) (tRNA(M-5-U54)- methyltransferase); n=9;
           Saccharomycetales|Rep: tRNA
           (uracil-5-)-methyltransferase (EC 2.1.1.35)
           (tRNA(M-5-U54)- methyltransferase) - Saccharomyces
           cerevisiae (Baker's yeast)
          Length = 639

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = +3

Query: 42  FASEIIVKSFKLLAPRSFTVAKPIKKTLSLN*EKTTPHFKGPRYFVATIFIIPPLAIG 215
           FA  ++ +  KLL P   TVA P++        K TPHF  P+     + + PPL  G
Sbjct: 277 FAPRLVAE--KLLPPFDTTVASPLQFGYRT---KITPHFDMPKRKQKELSVRPPLGFG 329


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 348,502,674
Number of Sequences: 1657284
Number of extensions: 6216576
Number of successful extensions: 16669
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16665
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12367962079
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)