Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0903
(359 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 23 0.72
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 23 0.72
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 23 0.72
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 23 0.72
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 21 3.8
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 5.1
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 21 5.1
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 20 6.7
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 20 6.7
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 20 8.8
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 20 8.8
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 20 8.8
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 23.4 bits (48), Expect = 0.72
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 238 GTACCVHRQCVSKDLFC 288
G C + +C+ K+LFC
Sbjct: 112 GKLSCGNGECIDKELFC 128
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 23.4 bits (48), Expect = 0.72
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 238 GTACCVHRQCVSKDLFC 288
G C + +C+ K+LFC
Sbjct: 119 GKLSCGNGECIDKELFC 135
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 23.4 bits (48), Expect = 0.72
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +2
Query: 221 VRPYYLELLAAFIDSAFPKIFSATYQLWNELPSTVFLE 334
+ PY++ LL + I YQL NE T+ E
Sbjct: 185 ILPYFINLLMELQYCHYLNILRVRYQLLNEYLETLVQE 222
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 23.4 bits (48), Expect = 0.72
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +2
Query: 221 VRPYYLELLAAFIDSAFPKIFSATYQLWNELPSTVFLE 334
+ PY++ LL + I YQL NE T+ E
Sbjct: 185 ILPYFINLLMELQYCHYLNILRVRYQLLNEYLETLVQE 222
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 21.0 bits (42), Expect = 3.8
Identities = 7/25 (28%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = +2
Query: 290 TYQ--LWNELPSTVFLERYDISFFK 358
TY+ +W + + E+Y + FF+
Sbjct: 126 TYEAFVWTRIMGVAYYEQYAVEFFQ 150
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 20.6 bits (41), Expect = 5.1
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +1
Query: 238 GTACCVHRQCVSKDLFC 288
G+ C C+ + LFC
Sbjct: 120 GSLACGDGNCIERGLFC 136
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 20.6 bits (41), Expect = 5.1
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +3
Query: 195 IPPLAIGAEFVHIIW 239
+ L++G+EF+ IW
Sbjct: 109 VETLSVGSEFIKNIW 123
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 20.2 bits (40), Expect = 6.7
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = -3
Query: 330 RNTVEGSSFQSWY 292
RN V+G+ ++W+
Sbjct: 392 RNAVQGTGIENWW 404
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 20.2 bits (40), Expect = 6.7
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = -3
Query: 330 RNTVEGSSFQSWY 292
RN V+G+ ++W+
Sbjct: 393 RNAVQGTGIENWW 405
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 19.8 bits (39), Expect = 8.8
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = +2
Query: 218 RVRPYYLELLAAFIDS 265
+++ YLE L A++D+
Sbjct: 479 KIQEIYLEALRAYVDN 494
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 19.8 bits (39), Expect = 8.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 216 AEFVHIIWN 242
A FVH IWN
Sbjct: 349 ATFVHEIWN 357
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 19.8 bits (39), Expect = 8.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 216 AEFVHIIWN 242
A FVH IWN
Sbjct: 305 ATFVHEIWN 313
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,474
Number of Sequences: 336
Number of extensions: 1624
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used: 7299165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -