Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0902
         (591 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8RFX5 Cluster: D-serine permease; n=1; Fusobacterium n...    36   0.54 
UniRef50_Q54E89 Cluster: Putative uncharacterized protein; n=1; ...    35   1.2  
UniRef50_Q697G7 Cluster: NADH-ubiquinone oxidoreductase chain 2;...    34   2.2  
UniRef50_Q0J1J2 Cluster: Os09g0436500 protein; n=1; Oryza sativa...    32   8.7  

>UniRef50_Q8RFX5 Cluster: D-serine permease; n=1; Fusobacterium
           nucleatum subsp. nucleatum|Rep: D-serine permease -
           Fusobacterium nucleatum subsp. nucleatum
          Length = 449

 Score = 36.3 bits (80), Expect = 0.54
 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = +2

Query: 242 SIKNSSQIILILN*NRIFAIIFKLV-VRDIHVRLQTLISLGILVTYIL 382
           S+K + QI+LI+     FA + KL  +++I + L T IS+GI+V YI+
Sbjct: 302 SLKTAGQIVLIVGAGGAFATVLKLSNLQEIVMNLFTGISIGIIVPYII 349


>UniRef50_Q54E89 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 846

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 27/89 (30%), Positives = 41/89 (46%)
 Frame = +2

Query: 92  HSCLKLKSFIKPYPIILNNEFT*NNTIKRCFYNKVEPNIFCYS*LDFKSCSIKNSSQIIL 271
           + C K  S I+  P+ LNN    NN+I     N + PNIF +  +  ++CS  +      
Sbjct: 713 YDCNKQYSNIQTPPVTLNNNNN-NNSISYQIRNYLLPNIFSFEFIFGRNCSCGSFKNSFG 771

Query: 272 ILN*NRIFAIIFKLVVRDIHVRLQTLISL 358
            L  + +  ++FK     I V    LISL
Sbjct: 772 DLLKSLVNNLLFKYAEELISVSYSNLISL 800


>UniRef50_Q697G7 Cluster: NADH-ubiquinone oxidoreductase chain 2;
           n=1; Aleurochiton aceris|Rep: NADH-ubiquinone
           oxidoreductase chain 2 - Aleurochiton aceris
          Length = 324

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 15/62 (24%), Positives = 35/62 (56%)
 Frame = -2

Query: 368 LIYLMI*VFVTSRVYLLRLT*KLWQIFCFNLKLRLFGYYF*LSMI*NRVSYNKIYLVRLY 189
           +I L+   F+ S ++ + ++  LW +     KL LF ++F + MI +++ +   +++  +
Sbjct: 64  IISLVFLTFILSLLFNIFMSVNLWIMIVLMAKLGLFPFHFWMIMILSKIDWTGFFMMSTF 123

Query: 188 YK 183
           YK
Sbjct: 124 YK 125


>UniRef50_Q0J1J2 Cluster: Os09g0436500 protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Os09g0436500 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 92

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -3

Query: 214 TKYIWFDFIIKAPFDCVVLCKFVVQNNRIGLDEAFK 107
           T  IWF F    PF CV +C FV+    + L EAFK
Sbjct: 14  TWVIWFLFFFWLPFFCVYICNFVMNLFPL-LPEAFK 48


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,854,499
Number of Sequences: 1657284
Number of extensions: 8665706
Number of successful extensions: 16979
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16976
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)