Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0900
(574 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 312 1e-85
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 309 1e-84
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 294 3e-80
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 202 2e-52
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 148 4e-36
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 143 8e-35
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 141 4e-34
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 139 1e-33
03_01_0034 + 318432-318825,318902-319851 139 1e-33
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 138 3e-33
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 132 3e-31
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 123 9e-29
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 111 5e-25
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.86
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 1.1
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 2.0
10_03_0016 - 7099862-7099967,7100059-7100357,7101862-7102171,710... 29 2.6
08_01_0312 + 2764744-2767390,2767632-2767990 29 2.6
12_02_0399 - 18600444-18600591,18600626-18601656 28 4.6
07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738 28 4.6
03_05_0246 + 22333172-22333417 28 4.6
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 28 4.6
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 28 4.6
07_03_1027 - 23371826-23372006,23372110-23372171,23372595-233743... 28 6.1
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 27 8.0
06_03_0735 - 23987349-23989196 27 8.0
06_01_0631 - 4605111-4605482,4605571-4605903,4605940-4605977,460... 27 8.0
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 27 8.0
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 312 bits (767), Expect = 1e-85
Identities = 140/169 (82%), Positives = 152/169 (89%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 245 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 424
HVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 425 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEF 571
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF 169
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 309 bits (758), Expect = 1e-84
Identities = 138/169 (81%), Positives = 151/169 (89%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 245 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 424
HVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 425 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEF 571
RIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF 169
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 294 bits (722), Expect = 3e-80
Identities = 130/169 (76%), Positives = 148/169 (87%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 245 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 424
HVPRA+FVDLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 425 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEF 571
R+RKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF 169
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 202 bits (493), Expect = 2e-52
Identities = 93/132 (70%), Positives = 109/132 (82%)
Frame = +2
Query: 176 TDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE 355
+D T G D+FNTFFSET +GKHVPRA+FVDLEPTV+DEV+TG YRQLFHPEQLI+ KE
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKE 157
Query: 356 DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERL 535
DAANN+ARGHYT+G+E+VDL LDR+RKLAD CTGLQGFL+F+ LL+ERL
Sbjct: 158 DAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERL 217
Query: 536 SVDYGKKSKLEF 571
SVDYG+KSKL F
Sbjct: 218 SVDYGRKSKLGF 229
Score = 81.4 bits (192), Expect = 5e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 181
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 148 bits (358), Expect = 4e-36
Identities = 71/176 (40%), Positives = 102/176 (57%)
Frame = +2
Query: 47 KKTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFS 226
KK + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYN 232
Query: 227 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 406
E G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 233 EASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 292
Query: 407 VDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFA 574
+D VLD +RK A+ C LQGF + H LL+ ++ +Y + L F+
Sbjct: 293 IDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 348
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 143 bits (347), Expect = 8e-35
Identities = 70/173 (40%), Positives = 100/173 (57%), Gaps = 3/173 (1%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 235
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGTSDLQLERVNVYYNEAS 55
Query: 236 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 415
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 CGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
Query: 416 VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFA 574
VLD +RK A+ C LQGF + H LL+ ++ +Y + L F+
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 168
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 141 bits (341), Expect = 4e-34
Identities = 67/170 (39%), Positives = 98/170 (57%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 245 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 424
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 425 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFA 574
+RK A+ C LQGF + H LL+ ++ +Y + L F+
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 168
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 139 bits (337), Expect = 1e-33
Identities = 65/170 (38%), Positives = 98/170 (57%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL--ERINVYYNEASGGR 58
Query: 245 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 424
+VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 425 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFA 574
+RK A+ C LQGF + H LL+ ++ +Y + L F+
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 168
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 139 bits (337), Expect = 1e-33
Identities = 66/170 (38%), Positives = 96/170 (56%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQL--ERVNVYYNEASCGR 58
Query: 245 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 424
VPRAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 118
Query: 425 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFA 574
+RK A+ C LQGF + H LL+ ++ +Y + L F+
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 168
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 138 bits (334), Expect = 3e-33
Identities = 66/170 (38%), Positives = 97/170 (57%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 245 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 424
VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 425 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFA 574
+RK A+ C LQGF + H LL+ ++ +Y + L F+
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 168
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 132 bits (318), Expect = 3e-31
Identities = 61/134 (45%), Positives = 84/134 (62%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL--ERVNVYYNEASCGR 58
Query: 245 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 424
VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 425 RIRKLADQCTGLQG 466
+RK A+ C LQG
Sbjct: 119 VVRKEAENCDCLQG 132
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 123 bits (297), Expect = 9e-29
Identities = 58/133 (43%), Positives = 80/133 (60%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGR 58
Query: 245 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 424
HVPRAV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 425 RIRKLADQCTGLQ 463
+RK A+ C LQ
Sbjct: 119 VVRKEAENCDCLQ 131
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 111 bits (266), Expect = 5e-25
Identities = 60/165 (36%), Positives = 91/165 (55%), Gaps = 2/165 (1%)
Frame = +2
Query: 68 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 247
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 248 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 421
+PRA+ VDLEP V++ ++ YR L++ E + + A NN+A G++ G+++VD ++
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIM 119
Query: 422 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKK 556
D I + AD L+GF++ H L+E L+ Y KK
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKK 164
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 30.7 bits (66), Expect = 0.86
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 204 SSPPPMVLSVGIWPSGWMPCSR 139
S P P+ LS I SGW+PCSR
Sbjct: 147 SMPYPITLSAVISLSGWLPCSR 168
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 201 SPPPMVLSVGIWPSGWMPCSR 139
+P P+ LSV + SGW+PC+R
Sbjct: 149 NPYPVNLSVSVGLSGWLPCAR 169
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 198 PPPMVLSVGIWPSGWMPCSR 139
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>10_03_0016 -
7099862-7099967,7100059-7100357,7101862-7102171,
7104402-7105054,7105266-7105554,7106549-7106634
Length = 580
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 322 VSSRTTYYW*GRCGQQLCPWSLHHWK 399
VS+RTTY +C Q CPW +H +K
Sbjct: 239 VSNRTTYKV--KCTQAGCPWRVHGYK 262
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 165 ARCPQTRPSGVETILSTLSSARPE 236
+RCPQ RPS + +LS L ARP+
Sbjct: 969 SRCPQERPS-MREVLSMLQEARPK 991
>12_02_0399 - 18600444-18600591,18600626-18601656
Length = 392
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 322 VSSRTTYYW*GRCGQQLCPWSLHHWK 399
+S+RTTY +C Q CPW +H +K
Sbjct: 240 ISNRTTYDV--KCTQAGCPWRVHGYK 263
>07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738
Length = 400
Score = 28.3 bits (60), Expect = 4.6
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -3
Query: 395 QWCSDHGHSCWPHLP 351
++ S+HGHSCW +P
Sbjct: 26 RYISEHGHSCWSSVP 40
>03_05_0246 + 22333172-22333417
Length = 81
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -1
Query: 355 FLTSNKLFWMKQLSVCASADLINNSRFKIDEDSTGYVLASSGLAEESVERIVSTPDGLVC 176
FL S LF++ L + L N S FKI + +T +V E++ ++ +C
Sbjct: 13 FLFSVSLFYIPDLMIDWIDPLTNKSTFKIKDTTTSFVEEKKNELEKAKSKLNVISSNKIC 72
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 108 RSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPE 236
++ M A T+ S +S P + PSGV L + SSA PE
Sbjct: 690 QTAMAASQATSISRGASQPLAVPNSMPSGVNFPLQSSSSAPPE 732
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 192 PMVLSVGIWPSGWMPCSR 139
P+ LS I SGW+PCSR
Sbjct: 184 PVTLSAVIGLSGWLPCSR 201
>07_03_1027 -
23371826-23372006,23372110-23372171,23372595-23374335,
23374609-23374704,23374967-23375043,23376807-23377307
Length = 885
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -3
Query: 509 TQSRYLHRRSGRSGILADRYTGQRACGFCPK-PNLRFPF 396
T + LH + RSG ADR+T C K P PF
Sbjct: 301 TLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPF 339
>10_08_0253 -
16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 126 GSFTAWSTASSLMARCPQTRPS-GVETILSTLSSARP 233
GSF+A + A+ L+ARCP R V + ST P
Sbjct: 5 GSFSAAAAAARLLARCPALRADPRVLALASTAGGGGP 41
>06_03_0735 - 23987349-23989196
Length = 615
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 494 LHRRSGRSGILADRYTGQRACGF 426
LH R+ R+G+LADRY F
Sbjct: 60 LHGRAARAGLLADRYLANALLAF 82
>06_01_0631 -
4605111-4605482,4605571-4605903,4605940-4605977,
4606208-4606520,4606622-4607967,4608265-4608334,
4608478-4608555
Length = 849
Score = 27.5 bits (58), Expect = 8.0
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = -1
Query: 256 TGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRD 77
T + A S L ++I S +V + A L ++L A +L +TDL LAN D
Sbjct: 589 TAFYFAFSTLTFSHGQKIQSIQSKIVVSYTA-SLSSMLTAERLQPSVTDLKQLLAN--GD 645
Query: 76 ALTHFDLSFFLCLNVELNYN 17
++ H SF + +L ++
Sbjct: 646 SVGHQSGSFVQSILKKLKFD 665
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 161 DGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 256
DG++PTD G D N S+ A + P+
Sbjct: 343 DGELPTDAAAQGADVDLNLRISQPAASQQSPK 374
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,787,574
Number of Sequences: 37544
Number of extensions: 391001
Number of successful extensions: 1309
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -