Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0898
         (479 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           24   0.63 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   1.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   1.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   1.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   2.6  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   2.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   3.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   5.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.8  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.2 bits (50), Expect = 0.63
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = -2

Query: 214 LQKHSRQWFDVVQIYGRGQSNERYDFAFVFWM*GHERE 101
           L+ +++ W  + Q   RG  + R DF   +W    +R+
Sbjct: 188 LKGNAKHWTGIFQKKWRGYEDFRRDFLRTYWSAKRQRD 225


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 354 TRFIRDEHTSVFGFLKLHKVPKNFLNSGSN 265
           T+F     TS F FL LH    +  ++  N
Sbjct: 242 TKFTEQSVTSTFDFLSLHPAETSMNDANRN 271


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 354 TRFIRDEHTSVFGFLKLHKVPKNFLNSGSN 265
           T+F     TS F FL LH    +  ++  N
Sbjct: 242 TKFTEQSVTSTFDFLSLHPAETSMNDANRN 271


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +1

Query: 142 RIFHCSGPCRISGQRQTTGDYV 207
           + FHC  P +   +    GDY+
Sbjct: 421 QFFHCYCPIKFGRKADPNGDYI 442


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 61  DNIHRIFYGNNHLLHVHVLTSRIQKQNRIFHC 156
           DN+  I Y   ++  VH+    I +  + F C
Sbjct: 235 DNVDTIMYEKTNVTFVHLAVLNILRVGKNFVC 266


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 354 TRFIRDEHTSVFGFLKLH 301
           T+F     TS F FL LH
Sbjct: 242 TKFTEQSVTSTFDFLSLH 259


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 229 GYVHILQKHSR 197
           GY H+LQ H R
Sbjct: 145 GYKHVLQNHER 155


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +3

Query: 78  ILWEQPPSSRSCPHIQNTKAKSYLSLLWPLPYIWTTSNHW 197
           + +E PP       I +  A  ++ LLW L   W T + W
Sbjct: 445 LFFESPPVVFLNDFISHQHA--WIWLLWLLSQTWITLHIW 482


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +3

Query: 78  ILWEQPPSSRSCPHIQNTKAKSYLSLLWPLPYIWTTSNHW 197
           + +E PP       I +  A  ++ LLW L   W T + W
Sbjct: 445 LFFESPPVVFLNDFISHQHA--WIWLLWLLSQTWITLHIW 482


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +3

Query: 78  ILWEQPPSSRSCPHIQNTKAKSYLSLLWPLPYIWTTSNHW 197
           + +E PP       I +  A  ++ LLW L   W T + W
Sbjct: 445 LFFESPPVVFLNDFISHQHA--WIWLLWLLSQTWITLHIW 482


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +3

Query: 78  ILWEQPPSSRSCPHIQNTKAKSYLSLLWPLPYIWTTSNHW 197
           + +E PP       I +  A  ++ LLW L   W T + W
Sbjct: 445 LFFESPPVVFLNDFISHQHA--WIWLLWLLSQTWITLHIW 482


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +1

Query: 127 IQKQNRIFHCSGPCRISGQRQTTGDYVFEEY 219
           I  +   + C G  R  GQ   + D  FE+Y
Sbjct: 57  IPAKRAAYDCEGVIRHHGQWNYSPDNHFEQY 87


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 306 LHKVPKNFLNSGSNVADIN 250
           L  VP NF   G +V +IN
Sbjct: 693 LPPVPPNFPTCGDHVPEIN 711


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,024
Number of Sequences: 336
Number of extensions: 2703
Number of successful extensions: 25
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)