Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0898
         (479 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos...    53   2e-08
SPBC16A3.12c |||triglyceride lipase-cholesterol esterase |Schizo...    48   7e-07
SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos...    40   1e-04
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc...    27   1.1  
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S...    25   4.5  
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch...    25   4.5  
SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyc...    25   5.9  
SPBC16D10.04c |dna2||DNA replication endonuclease-helicase Dna2|...    25   7.8  
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo...    25   7.8  
SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces pomb...    25   7.8  
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei...    25   7.8  

>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 467

 Score = 53.2 bits (122), Expect = 2e-08
 Identities = 25/56 (44%), Positives = 32/56 (57%)
 Frame = +2

Query: 5   KYDAPAMIDKVLNVTGHQKIIYIGYSMGXXXXXXXMSSHPEYKSKIVSFIALAPAV 172
           +YD P  ID +L  +G  K+ YIG+S G       +S HP    KI S IALAPA+
Sbjct: 197 QYDIPDTIDYILKTSGQTKLTYIGFSQGTAQAFASLSIHPLLNDKINSLIALAPAI 252


>SPBC16A3.12c |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 443

 Score = 48.0 bits (109), Expect = 7e-07
 Identities = 21/54 (38%), Positives = 31/54 (57%)
 Frame = +2

Query: 8   YDAPAMIDKVLNVTGHQKIIYIGYSMGXXXXXXXMSSHPEYKSKIVSFIALAPA 169
           +D P  +D +L  TG +K+ YIG+S G       +S +P+   K+  FI LAPA
Sbjct: 186 FDIPDTVDYILRETGREKLNYIGFSQGTAQAMAALSINPDLNDKVNIFIGLAPA 239


>SPBC14C8.15 |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 460

 Score = 40.3 bits (90), Expect = 1e-04
 Identities = 17/55 (30%), Positives = 31/55 (56%)
 Frame = +2

Query: 8   YDAPAMIDKVLNVTGHQKIIYIGYSMGXXXXXXXMSSHPEYKSKIVSFIALAPAV 172
           +D P+++  +L+V     I  +G+S G       +S   E ++ + +FIALAPA+
Sbjct: 190 FDIPSIVKYILSVNSFDSISLVGFSQGAILAFAALSIDTELRNSVRAFIALAPAI 244


>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 442

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +2

Query: 347 NLVVGEDNEQTDPDVRYMLVARMEPASWRQIEHYGKIALT 466
           N V  E  E+++ +     + R +P  W+Q +HY  + L+
Sbjct: 66  NKVQEEVKEESEDEEEDPAMLRADPKEWKQQDHYAVLGLS 105


>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
           Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 832

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +1

Query: 166 CRISGQRQTTGDYVFEEYEHTRH 234
           C ++G+R++ GD+V  E +  +H
Sbjct: 271 CNLNGERKSFGDFVENEVKSYKH 293


>SPBC25B2.07c |mug164||microtubule-associated
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 501

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -3

Query: 423 AGSILATNIY-LTSGSVCSLSSPTTRFIRDEHTSVFGFLKLHKVPKNFLNSGSNVADIN 250
           + SIL  + + LTS S  + +  TT+ I++  T V     +H  P    N  S + D N
Sbjct: 429 SSSILHRHAHSLTSSSFSTKTLATTKEIQNSPTLVESSTVVHHDPSYLQNQTSEINDTN 487


>SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 618

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -3

Query: 69  YIIFWWPVTLRTLSIMAGAS 10
           Y+IF+W + + +LS++A  S
Sbjct: 247 YMIFYWSINVGSLSVLATTS 266


>SPBC16D10.04c |dna2||DNA replication endonuclease-helicase
           Dna2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1398

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 321 FGFLKLHKVPKNFLNSGSNVAD 256
           F FL  +  P+NFL+SG +V +
Sbjct: 785 FAFLNDNGYPRNFLHSGFSVGE 806


>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
           Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 650

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
 Frame = -3

Query: 477 VNSPVKAIFP*CSICLQEAGSILATNI----YLTSG---SVCSLSSPTTRFIRDEHTSVF 319
           ++    ++FP  +  ++   S +  N+    YL++G   +  + SSP +RF   +HTS  
Sbjct: 344 IHQSKSSVFPQPASAMKPMASPMLPNVNSMPYLSNGDHNNNGNTSSPVSRFSYGQHTS-- 401

Query: 318 GFLKLHKVPKNF 283
                 K+P NF
Sbjct: 402 NVPSTQKLPSNF 413


>SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 455

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -3

Query: 201 VASGLTLSRYTAGARAMKDTILLLYSGCEDMNVKKVVVPIEY 76
           VA+G+    YT+   A+ D  L      ED+N      P+ Y
Sbjct: 407 VAAGIVAQMYTSKRMALGDPSLFAGLPEEDVNTGSSETPVPY 448


>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1462

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 158 LAPAVYLDNVKPLATMFLKNM 220
           L P V L+NVKPL   F K +
Sbjct: 253 LYPGVELENVKPLLANFSKQL 273


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,160,836
Number of Sequences: 5004
Number of extensions: 46097
Number of successful extensions: 198
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 184020746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)