Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0898
(479 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 8e-07
SB_51512| Best HMM Match : Abhydro_lipase (HMM E-Value=9.8e-06) 48 3e-06
SB_25531| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33) 48 5e-06
SB_8327| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49
SB_39520| Best HMM Match : Abhydrolase_1 (HMM E-Value=2) 30 1.1
SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_43319| Best HMM Match : Laminin_A (HMM E-Value=0.0086) 28 3.5
SB_2205| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_1925| Best HMM Match : Tctex-1 (HMM E-Value=8.7e-12) 28 4.6
SB_4658| Best HMM Match : HTH_psq (HMM E-Value=0) 27 6.1
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1
SB_49841| Best HMM Match : Extensin_2 (HMM E-Value=0.29) 27 8.0
SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_37805| Best HMM Match : DoxA (HMM E-Value=1.7) 27 8.0
SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14) 27 8.0
SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 8.0
>SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 668
Score = 50.4 bits (115), Expect = 8e-07
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 3/154 (1%)
Frame = +2
Query: 5 KYDAPAMIDKVLNVTGHQKIIYIGYSMGXXXXXXXMSSHPEYKSKIVSFIALAPAVYLDN 184
KYD PAMID V TG + Y G+S G + +P K+ +F ALAP + +
Sbjct: 411 KYDLPAMIDFVTKTTGQASLYYAGHSQGTMIGFIAFAHNPAVIQKVKAFYALAPVSTVSH 470
Query: 185 V-KPLATMFLKNMNIPDIMRSRGFISATFEPEFKKFLGTLCNFRNPKTDVCSSLINLVVG 361
+ L + + I + + G + + L L + VCS + L+ G
Sbjct: 471 MGGALKYLAYLSPEIEFLFKVLGVRDFLPTDDVMRVLADLVCRPDYIRVVCSDFLFLIAG 530
Query: 362 EDNEQTDPDVRYMLVARMEPA--SWRQIEHYGKI 457
D Q + + R + PA S + + H+ +I
Sbjct: 531 MDRSQLN-ETRLPIYISHTPAGTSVKNVVHFAQI 563
>SB_51512| Best HMM Match : Abhydro_lipase (HMM E-Value=9.8e-06)
Length = 226
Score = 48.4 bits (110), Expect = 3e-06
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Frame = +2
Query: 5 KYDAPAMIDKVLNVTGHQKIIYIGYSMGXXXXXXXMSSHPEYKSKIVSFIALAPAVYLDN 184
KYD PAMID V TG + Y G+S G + +P K+ +F ALAP + +
Sbjct: 88 KYDLPAMIDFVTKTTGQASLYYAGHSQGTMIGFIAFAHNPAVIQKVKAFYALAPVSTVSH 147
Query: 185 V-KPLATMFLKNMNIPDIMRSRGFISATFEPEFKKFLGTLCNFRNPKTDVCSSLINLVVG 361
+ L + + I + + G + + L L + VCS + L+ G
Sbjct: 148 MGGALKYLAYLSPEIEFLFKVLGVRDFLPTDDLMRVLADLVCRPDYIRVVCSDFLFLIAG 207
Query: 362 EDNEQTDPDVRYMLVA 409
D Q + +VR ++ +
Sbjct: 208 MDRSQLN-EVRAIVTS 222
>SB_25531| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 48.0 bits (109), Expect = 4e-06
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Frame = +2
Query: 5 KYDAPAMIDKVLNVTGHQKIIYIGYSMGXXXXXXXMSSHPEYKSKIVSFIALAPAVYLDN 184
KYD PAMID V TG + Y G+S G + +P K+ +F ALAP + +
Sbjct: 7 KYDLPAMIDFVTKTTGQASLYYAGHSQGTMIGFIAFAHNPAVIQKVKAFYALAPVSTVSH 66
Query: 185 V-KPLATMFLKNMNIPDIMRSRGFISATFEPEFKKFLGTLCNFRNPKTDVCSSLINLVVG 361
+ L + + I + + G + + L L + VCS + L+ G
Sbjct: 67 MGGALKYLAYLSPEIEFLFKVLGVRDFLPTDDVMRVLADLVCRPDYIRVVCSDFLFLIAG 126
Query: 362 EDNEQTDPDVRYMLVA 409
D Q + +VR ++ +
Sbjct: 127 MDRSQLN-EVRAIVTS 141
>SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)
Length = 991
Score = 47.6 bits (108), Expect = 5e-06
Identities = 37/160 (23%), Positives = 70/160 (43%), Gaps = 4/160 (2%)
Frame = +2
Query: 5 KYDAPAMIDKVLNVTGHQKIIYIGYSMGXXXXXXXMSSHPEYKSKIVSFIALAPAVYLDN 184
+YD PAMID V T ++ Y+G+S G S++ E KI F ALAP + +
Sbjct: 221 QYDLPAMIDYVTLATSQSQVFYVGHSQGTLIGFTGFSANQELAKKIKMFFALAPVYTVAH 280
Query: 185 VKPLATMFLKNMNIPDIMRSRGFISATFEP-EFKKFLGT--LCNFRNPKTDVCSSLINLV 355
V + P + +S F P + K + +C+ R ++C +
Sbjct: 281 VSEFIKASAYAL-FPVTHIFQNHVSEEFVPSKLTKMMSDAGVCS-RAKSEELCYKTGETL 338
Query: 356 VGEDNEQTDPDVRYMLVARM-EPASWRQIEHYGKIALTGE 472
G D+ + ++++ S++ + H+G++ +G+
Sbjct: 339 FGFDSSNLNMSRVPVIMSHWGSGTSFKNMVHFGQMVTSGK 378
>SB_8327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 31.1 bits (67), Expect = 0.49
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +2
Query: 113 SSHPEYKSKIVSFIALAPAVYLDNVKPLATMFLKNMNIPDIMRSRG---FISATFEPEFK 283
+S+ E S V + PA L V L FLK++ PD + S+ ++ E E +
Sbjct: 291 ASYGERTSATVRQMMNTPAHVLPAVSVLCASFLKSLLAPDAIHSQNPSMEVNTDKEMESE 350
Query: 284 KFLGTLCNFRNPKTDV-CSSL 343
+ +G LC +P T + CS +
Sbjct: 351 ECVGYLCRAGDPVTWIKCSKM 371
>SB_39520| Best HMM Match : Abhydrolase_1 (HMM E-Value=2)
Length = 265
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 23 MIDKVLNVTGHQKIIYIGYSMG 88
MID VL TG ++ YIG+S G
Sbjct: 1 MIDYVLQTTGQSQLFYIGHSQG 22
>SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1021
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 22 HDRQSPQRDRPPEDNIHRIFYGNNHLLHVHVLTSRIQKQNRIFHCSGPCRISGQRQTTGD 201
H Q Q EDNIH++ YGN ++ V ++ R S P R+ G +QT
Sbjct: 636 HGGQPRQGAAQVEDNIHQLLYGNT--INGGVPSNNNGMYQR--GASYPPRMPGMQQTPSQ 691
Query: 202 YVFEE 216
Y +++
Sbjct: 692 YGYQQ 696
>SB_43319| Best HMM Match : Laminin_A (HMM E-Value=0.0086)
Length = 375
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 238 HYVGYVHILQKHSRQWFDVVQIYGRGQSNERY 143
H V +++ RQW D+V Y G N +Y
Sbjct: 80 HRVRLANVMASGGRQWADIVGQYNSGTYNNQY 111
>SB_2205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -3
Query: 159 RAMKDTILLLYSGCEDMNVKKVVVPIEYPMYIIFW 55
+++K+ I L Y GC+D+ + + + P Y + W
Sbjct: 176 KSVKNLINLTYEGCKDVPIYRSITQENEPAYRVDW 210
>SB_1925| Best HMM Match : Tctex-1 (HMM E-Value=8.7e-12)
Length = 349
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 394 VYVGGKNGAGLLETDRALWENSFD 465
VYVG K G + T R +W+ FD
Sbjct: 230 VYVGQKEGQDVRITSRCVWDTRFD 253
>SB_4658| Best HMM Match : HTH_psq (HMM E-Value=0)
Length = 1595
Score = 27.5 bits (58), Expect = 6.1
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = -3
Query: 393 LTSGSVCSLSSPTTRFIRDE---HTSVFGFLKL--HKVPKN 286
+T+ S CSLS+P+ + +E +SVF KL HK P N
Sbjct: 540 ITADSPCSLSAPSLPLVHNELPVISSVFSLSKLNMHKEPGN 580
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 10 RRTSHDRQSPQRDRPPEDNIHRIFYGN 90
RRTSH ++ Q R P+ + RIF N
Sbjct: 1408 RRTSHHQRHTQSHRKPKKELCRIFNNN 1434
>SB_49841| Best HMM Match : Extensin_2 (HMM E-Value=0.29)
Length = 1841
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 317 PKTDVCSSLINLVVGEDNEQTDPDVRYMLVARMEP 421
P+ V S+L+ LVVG ++ P LV MEP
Sbjct: 834 PRPVVPSALVQLVVGMEHRPVVPFAPVQLVVDMEP 868
>SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2250
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -2
Query: 202 SRQWFDVVQIYGRGQ---SNERYDFAFVFWM*GHEREEGGCSHRISYVY 65
+R++F + Y G E+Y+ +F W G + E CS R+ +VY
Sbjct: 900 NREFFSELGQYDPGMFIWGGEQYEISFKLWQCGGQLENIPCS-RVGHVY 947
>SB_37805| Best HMM Match : DoxA (HMM E-Value=1.7)
Length = 788
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 412 SCHQHIPYVRIGLFIVFSDYKVYKGRAYISLW 317
S +Q + Y+R+ S + VY+G AYI +W
Sbjct: 586 SVYQGLAYIRVQRI---SGFSVYQGSAYIRVW 614
>SB_26282| Best HMM Match : Tctex-1 (HMM E-Value=3.1e-14)
Length = 273
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 394 VYVGGKNGAGLLETDRALWENSFDR 468
V +G K+ G+ R LW + FDR
Sbjct: 226 VSIGSKSDQGMRVASRCLWHSEFDR 250
>SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1038
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 169 RISGQRQTTGDYVFEEYEHTRHNAIERIYI 258
R+S R + DY + EY HT + IE YI
Sbjct: 882 RVSLYRVSYTDYRYIEYRHTEYRYIEYRYI 911
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,992,795
Number of Sequences: 59808
Number of extensions: 330324
Number of successful extensions: 910
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1001731762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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