Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0897
         (508 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1312 + 26055372-26056056,26056935-26057187,26057277-260580...    28   5.0  

>08_02_1312 +
           26055372-26056056,26056935-26057187,26057277-26058081,
           26058828-26058952,26059081-26059165,26059473-26059626,
           26059724-26059761,26059842-26060109,26060257-26060380,
           26060508-26060868,26061904-26062272,26062528-26062609,
           26063042-26063193
          Length = 1166

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 312 DLLESLSGHPCCDISHTIRPSYLHHIALHGNVR 214
           +LL   +GH C  I   I  SY+  +A HG +R
Sbjct: 463 NLLAEWTGHSCPVIQMAIGGSYVFTLAHHGGIR 495


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,694,400
Number of Sequences: 37544
Number of extensions: 190231
Number of successful extensions: 339
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 339
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)