Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0896
(568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 103 7e-23
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 95 2e-20
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 90 1e-18
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 82 2e-16
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 75 5e-14
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 71 4e-13
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 71 4e-13
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 71 4e-13
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 69 3e-12
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 67 7e-12
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 58 4e-09
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 58 4e-09
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 58 4e-09
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 58 6e-09
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 58 6e-09
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 56 2e-08
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 53 1e-07
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 53 1e-07
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 53 1e-07
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 53 2e-07
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 53 2e-07
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 51 7e-07
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 49 2e-06
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 49 2e-06
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 48 6e-06
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 47 8e-06
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 47 8e-06
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 46 3e-05
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 43 2e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 40 0.002
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 40 0.002
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 40 0.002
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 40 0.002
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 40 0.002
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 38 0.005
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 38 0.005
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 38 0.005
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 32 0.33
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 31 0.44
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 31 0.44
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 31 0.76
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 31 0.76
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 31 0.76
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 1.3
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 3.1
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 29 3.1
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.1
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.1
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 28 4.1
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 28 4.1
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 28 5.4
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 28 5.4
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 28 5.4
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 28 5.4
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr... 27 7.1
AL132902-13|CAL64008.1| 913|Caenorhabditis elegans Hypothetical... 27 7.1
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 27 7.1
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 27 9.4
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 27 9.4
U53338-3|AAA96191.1| 534|Caenorhabditis elegans Ammonium transp... 27 9.4
AL021346-2|CAB63233.1| 419|Caenorhabditis elegans Hypothetical ... 27 9.4
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 27 9.4
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 103 bits (248), Expect = 7e-23
Identities = 46/115 (40%), Positives = 77/115 (66%)
Frame = +2
Query: 224 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN 403
+R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 404 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 568
P + + + +++PT IQ+ WPIAMSG++++ +A+TGSGKTLA++LPA+VH
Sbjct: 137 LPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVH 190
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 95.5 bits (227), Expect = 2e-20
Identities = 42/111 (37%), Positives = 67/111 (60%)
Frame = +2
Query: 236 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDY 415
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 416 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 568
+ + ++ Y++PTPIQA P A+SG++++G+A+TGSGKT AY+ PAIVH
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVH 326
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 89.8 bits (213), Expect = 1e-18
Identities = 38/79 (48%), Positives = 56/79 (70%)
Frame = +2
Query: 329 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 509 GVAQTGSGKTLAYILPAIV 565
GVA+TGSGKT A++LP +V
Sbjct: 343 GVAETGSGKTAAFLLPLLV 361
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 82.2 bits (194), Expect = 2e-16
Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Frame = +2
Query: 224 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEA 400
+ + D V + F KNFY + + + EV+ YR + +TV G++ PI+ + +
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 401 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 568
+ +K Y +PT IQAQ P MSG++++G+A+TGSGKTLA++LP H
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRH 365
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 74.5 bits (175), Expect = 5e-14
Identities = 40/113 (35%), Positives = 70/113 (61%), Gaps = 8/113 (7%)
Frame = +2
Query: 254 LQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEANFPD 412
++P ++ Y SP +++E Y N + V S V++ P+ FE+A +
Sbjct: 33 MKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAFGSN 92
Query: 413 YVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 568
G ++ G+++P+PIQ+Q WP+ +SG++ +GV+QTGSGKTLA++LPA++H
Sbjct: 93 ASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLH 145
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 71.3 bits (167), Expect = 4e-13
Identities = 34/77 (44%), Positives = 46/77 (59%)
Frame = +2
Query: 338 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 517
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 183
Query: 518 QTGSGKTLAYILPAIVH 568
QTGSGKT A++LP I H
Sbjct: 184 QTGSGKTAAFLLPIIQH 200
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 71.3 bits (167), Expect = 4e-13
Identities = 34/77 (44%), Positives = 46/77 (59%)
Frame = +2
Query: 338 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 517
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 167
Query: 518 QTGSGKTLAYILPAIVH 568
QTGSGKT A++LP I H
Sbjct: 168 QTGSGKTAAFLLPIIQH 184
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 71.3 bits (167), Expect = 4e-13
Identities = 34/77 (44%), Positives = 46/77 (59%)
Frame = +2
Query: 338 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 517
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 164
Query: 518 QTGSGKTLAYILPAIVH 568
QTGSGKT A++LP I H
Sbjct: 165 QTGSGKTAAFLLPIIQH 181
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 68.5 bits (160), Expect = 3e-12
Identities = 27/72 (37%), Positives = 45/72 (62%)
Frame = +2
Query: 347 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 526
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+ AQTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 527 SGKTLAYILPAI 562
SGKT A+++P +
Sbjct: 214 SGKTAAFLVPLV 225
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 67.3 bits (157), Expect = 7e-12
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +2
Query: 284 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 460
P + ++S + E R ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 461 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 565
IQ QG P+A+SG++++G+A TGSGKT+ ++LP ++
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVM 250
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 58.0 bits (134), Expect = 4e-09
Identities = 26/60 (43%), Positives = 37/60 (61%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 556
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 58.0 bits (134), Expect = 4e-09
Identities = 26/60 (43%), Positives = 37/60 (61%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 556
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 58.0 bits (134), Expect = 4e-09
Identities = 26/60 (43%), Positives = 37/60 (61%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 556
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 57.6 bits (133), Expect = 6e-09
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 556
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 57.6 bits (133), Expect = 6e-09
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 556
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 55.6 bits (128), Expect = 2e-08
Identities = 23/58 (39%), Positives = 36/58 (62%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 562
FE+ N + + GY +PTPIQ P+A++GK++ A TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPIL 207
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 53.2 bits (122), Expect = 1e-07
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 556
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLP 609
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 53.2 bits (122), Expect = 1e-07
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 556
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLP 609
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 53.2 bits (122), Expect = 1e-07
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 556
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLP 609
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/64 (32%), Positives = 39/64 (60%)
Frame = +2
Query: 371 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 550
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 551 LPAI 562
+P +
Sbjct: 80 IPML 83
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/64 (32%), Positives = 39/64 (60%)
Frame = +2
Query: 371 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 550
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 551 LPAI 562
+P +
Sbjct: 80 IPML 83
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 50.8 bits (116), Expect = 7e-07
Identities = 27/89 (30%), Positives = 45/89 (50%)
Frame = +2
Query: 296 VLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 475
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 476 WPIAMSGKNLVGVAQTGSGKTLAYILPAI 562
P +N++ A TGSGKTLA+ LP I
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVI 185
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/58 (36%), Positives = 36/58 (62%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 562
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPIL 148
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/58 (36%), Positives = 36/58 (62%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 562
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPIL 148
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/53 (41%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +2
Query: 407 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAI 562
P+ V + ++ MG+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLV 215
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 47.6 bits (108), Expect = 6e-06
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +2
Query: 422 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 562
+G+K Y +PT IQ +++G ++VG A+TGSGKTLA ++P +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVL 135
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 47.2 bits (107), Expect = 8e-06
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +2
Query: 407 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 565
P + +K M PTPIQ + M G ++V A TGSGKTLA+++P ++
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVI 796
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 47.2 bits (107), Expect = 8e-06
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +2
Query: 407 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 565
P + +K M PTPIQ + M G ++V A TGSGKTLA+++P ++
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVI 796
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 562
F E + + +G+ +P+ IQ P A+ GK+++G+A+TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVL 103
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/47 (44%), Positives = 33/47 (70%)
Frame = +2
Query: 422 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 562
+ V+ +G+ T IQA+ + GK+++ A+TGSGKTLA++LPAI
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI 127
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/46 (36%), Positives = 32/46 (69%)
Frame = +2
Query: 425 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 562
G+ G+++P+PIQ +A++G++++ A+ G+GKT AY +P I
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVI 102
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/58 (27%), Positives = 35/58 (60%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 562
F + + + + + +G+++ +Q +A+ KN++G A+TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLV 148
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 380 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 553
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 380 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 553
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 380 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 553
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/58 (27%), Positives = 34/58 (58%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 562
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAV 81
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/58 (27%), Positives = 34/58 (58%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 562
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAV 81
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/63 (23%), Positives = 36/63 (57%)
Frame = +2
Query: 374 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYIL 553
N I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 554 PAI 562
+
Sbjct: 83 SVL 85
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 556
FEE + + ++ + PT +Q++ P + G + + A+TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +2
Query: 443 YKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAI 562
+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLV 48
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/56 (25%), Positives = 34/56 (60%)
Frame = +2
Query: 380 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAY 547
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATF 83
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/56 (25%), Positives = 34/56 (60%)
Frame = +2
Query: 380 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAY 547
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATF 83
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/61 (22%), Positives = 35/61 (57%)
Frame = +2
Query: 380 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 559
I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 560 I 562
+
Sbjct: 85 L 85
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 31.9 bits (69), Expect = 0.33
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +2
Query: 485 AMSGKNLVGVAQTGSGKTLAYILPAIVH 568
A+ GKN V VA TGSGKT I A+ H
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKH 409
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +2
Query: 380 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 556
++ F E P+ ++ V YK T +Q ++ ++V + TGSGKTLA++LP
Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLP 66
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 461 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 562
+Q + G+ LV A TG GKT A+++PAI
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 52
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 31.5 bits (68), Expect = 0.44
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 461 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 562
+Q + G+ LV A TG GKT A+++PAI
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 152
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 30.7 bits (66), Expect = 0.76
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +2
Query: 422 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYIL 553
+G+ G+++P+ IQ +GK++ +Q GSGKT+ ++
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLI 52
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 30.7 bits (66), Expect = 0.76
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 458 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 565
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 30.7 bits (66), Expect = 0.76
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 458 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 565
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 4 PASERIHSLNKHLQLNPKNNHVW 72
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 521 TGSGKTLAYILPAIVH 568
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 145 RRIIAEFVASSKFGTTVSTAIIPV 74
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 145 RRIIAEFVASSKFGTTVSTAIIPV 74
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 28.7 bits (61), Expect = 3.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 479 PIAMSGKNLVGVAQTGSGKTLAYILPAI 562
P + +++ A TGSGKT+ Y+LP +
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVL 178
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -1
Query: 502 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 323
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 322 D 320
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -1
Query: 502 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 323
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 322 D 320
+
Sbjct: 86 N 86
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 482 IAMSGKNLVGVAQTGSGKTL 541
+A+ GKN + A TGSGKT+
Sbjct: 303 VALQGKNTIVTAPTGSGKTV 322
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 482 IAMSGKNLVGVAQTGSGKTL 541
+A+ GKN + A TGSGKT+
Sbjct: 303 VALQGKNTIVTAPTGSGKTV 322
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = -1
Query: 238 IWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAIIPVTRHDY 59
++ H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 58 FSDLVEDVYLNYGFFLTQ 5
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = -1
Query: 238 IWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAIIPVTRHDY 59
++ H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 58 FSDLVEDVYLNYGFFLTQ 5
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = -1
Query: 238 IWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAIIPVTRHDY 59
++ H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 58 FSDLVEDVYLNYGFFLTQ 5
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = -1
Query: 238 IWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAIIPVTRHDY 59
++ H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 58 FSDLVEDVYLNYGFFLTQ 5
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 284 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 442
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 284 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 442
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical
protein T21C9.6 protein.
Length = 1215
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 239 WDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPI 382
+ + L+ FN+ Y+ PT L + +E+YR + + G+ NP+
Sbjct: 165 YSNALLKSFNE-IYNDKPTALIENLKTIEKYRKGNVLNQMGLRHRNPL 211
>AL132902-13|CAL64008.1| 913|Caenorhabditis elegans Hypothetical
protein Y71A12B.17 protein.
Length = 913
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 141 LLDLATVAIDLEDLEDLVGKKNSLEVRTCVAQIGILFRSN 260
+L+ AT+ L+ L KNS R C+A I F+ N
Sbjct: 490 VLNFATLETTLKALAHYTNLKNSAATRRCLASIKSQFKKN 529
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 135 IILLDLATVAIDLEDLEDLVGKKNSLEVRTCVA 233
+I+ + ID++DL +V KN + + CVA
Sbjct: 236 LIIASTCWMIIDMDDLSTVVFHKNEITTKRCVA 268
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 542 PTFCRNPFGLRQLNSFQT*LSASLELEWASVLCN 441
P CRN F +RQ N + S+ L W V CN
Sbjct: 205 PPPCRNDFSMRQFNPLEDEHLRSMHL-WNHVGCN 237
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 542 PTFCRNPFGLRQLNSFQT*LSASLELEWASVLCN 441
P CRN F +RQ N + S+ L W V CN
Sbjct: 205 PPPCRNDFSMRQFNPLEDEHLRSMHL-WNHVGCN 237
>U53338-3|AAA96191.1| 534|Caenorhabditis elegans Ammonium
transporter homolog protein1 protein.
Length = 534
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1
Query: 205 FFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAIIPVTRH 65
FFF S ++ +I + A + R EF+ + T +ST I PV H
Sbjct: 115 FFFQYVFSATAATIVSGAVAER--CEFITYVTYCTVISTFIYPVLTH 159
>AL021346-2|CAB63233.1| 419|Caenorhabditis elegans Hypothetical
protein H37A05.2 protein.
Length = 419
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 191 QILQILQIYCHRCQIEKNYRRICCLL 114
+ + I +YC +I+KNY R+ L
Sbjct: 240 EAMDIFDLYCGSSEIQKNYSRVSAFL 265
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = -1
Query: 493 RHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFDFI 314
R S+RP + R+ F+ L L+H+ I + +M +L IIS ++
Sbjct: 224 RKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLTIIS---QYL 275
Query: 313 W*SFENCRMWIIKVF 269
W + C + I +F
Sbjct: 276 WQLAQGCPVIIYLIF 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,058,676
Number of Sequences: 27780
Number of extensions: 248500
Number of successful extensions: 927
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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