Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0894
         (538 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   3.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   3.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.9  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   6.9  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.1  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.1  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   9.1  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
          protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +2

Query: 14 YCIHITHSH 40
          +C+H+ HSH
Sbjct: 12 FCLHVQHSH 20


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 10  GILYTHYTLALSLSILNGS 66
           G++YT YT+ L L   +GS
Sbjct: 241 GVIYTTYTIFLLLIFGSGS 259


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +3

Query: 15   IVYTLHTRIEFVHFKWEY 68
            IV+ L  + +++H KW +
Sbjct: 1282 IVFLLTLKKDYLHIKWPF 1299


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +3

Query: 15   IVYTLHTRIEFVHFKWEY 68
            IV+ L  + +++H KW +
Sbjct: 1282 IVFLLTLKKDYLHIKWPF 1299


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 148 LVA*VFSAIAAILWLKYCD 92
           L A V SAIA  L+L  CD
Sbjct: 5   LTACVGSAIAGFLFLLICD 23


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 329 VAHIASDKSGATENCGY 279
           +A  ASD    TENC Y
Sbjct: 58  LAFDASDPKFLTENCDY 74


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 329 VAHIASDKSGATENCGY 279
           +A  ASD    TENC Y
Sbjct: 58  LAFDASDPKFLTENCDY 74


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 372 LCMVKLTGYQFF 337
           +C+V L  YQFF
Sbjct: 22  VCLVPLNPYQFF 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,399
Number of Sequences: 336
Number of extensions: 2630
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)