Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0894
         (538 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3380|AAF51613.1|  416|Drosophila melanogaster CG6020-PA...   168   4e-42
BT004491-1|AAO42655.1|  327|Drosophila melanogaster GM13757p pro...    89   5e-18
BT029034-1|ABJ16967.1|  324|Drosophila melanogaster IP02858p pro...    47   2e-05

>AE014296-3380|AAF51613.1|  416|Drosophila melanogaster CG6020-PA
           protein.
          Length = 416

 Score =  168 bits (409), Expect = 4e-42
 Identities = 83/104 (79%), Positives = 88/104 (84%)
 Frame = +3

Query: 225 NLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKV 404
           N AA KRGTGGRSSFNGIVATVFG TGFVGRYVCNKLGK GTQ+ILPYRGD  D  RLKV
Sbjct: 47  NPAAMKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLKV 106

Query: 405 CGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFK 536
            GDLGQVLF  Y+L D  SI  AV++SNVVINLVGRD+ETKNFK
Sbjct: 107 TGDLGQVLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNFK 150


>BT004491-1|AAO42655.1|  327|Drosophila melanogaster GM13757p
           protein.
          Length = 327

 Score = 88.6 bits (210), Expect = 5e-18
 Identities = 44/61 (72%), Positives = 49/61 (80%)
 Frame = +3

Query: 354 LILPYRGDFYDAQRLKVCGDLGQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNF 533
           +ILPYRGD  D  RLKV GDLGQVLF  Y+L D  SI  AV++SNVVINLVGRD+ETKNF
Sbjct: 1   MILPYRGDDSDVIRLKVTGDLGQVLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNF 60

Query: 534 K 536
           K
Sbjct: 61  K 61


>BT029034-1|ABJ16967.1|  324|Drosophila melanogaster IP02858p
           protein.
          Length = 324

 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 21/26 (80%), Positives = 24/26 (92%)
 Frame = +3

Query: 459 SIAKAVRYSNVVINLVGRDYETKNFK 536
           SI  AV++SNVVINLVGRD+ETKNFK
Sbjct: 33  SIRDAVKHSNVVINLVGRDFETKNFK 58


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,180,217
Number of Sequences: 53049
Number of extensions: 461854
Number of successful extensions: 1143
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)