Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0893
         (633 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    25   0.46 
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    25   0.46 
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   9.9  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 434 SYTLSED*FEHRILENFHSLLSKTENHRNREY 529
           +YTL  D F+  I+E++H    KT+ H  +++
Sbjct: 57  AYTLFADLFDP-IIEDYHGGFKKTDKHPPKDF 87


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 434 SYTLSED*FEHRILENFHSLLSKTENHRNREY 529
           +YTL  D F+  I+E++H    KT+ H  +++
Sbjct: 73  AYTLFADLFDP-IIEDYHGGFKKTDKHPPKDF 103


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 287 ITQIHKIYCFIHNNFNIG 234
           +TQ++K  C  + N N+G
Sbjct: 34  MTQVNKEECDYYQNLNLG 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,984
Number of Sequences: 438
Number of extensions: 2386
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)