Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0891
(475 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 198 2e-51
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 196 8e-51
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 193 4e-50
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 83 9e-17
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 81 3e-16
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 76 1e-14
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 75 2e-14
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 72 2e-13
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 71 4e-13
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 71 5e-13
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 71 5e-13
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 71 5e-13
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 70 7e-13
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 70 9e-13
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 70 9e-13
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 70 9e-13
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 69 2e-12
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 68 3e-12
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 67 5e-12
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 67 7e-12
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 66 2e-11
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 65 3e-11
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 65 3e-11
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 64 3e-11
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 64 3e-11
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 64 5e-11
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 63 8e-11
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 63 8e-11
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 63 8e-11
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 61 4e-10
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 61 4e-10
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 60 1e-09
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 60 1e-09
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 59 2e-09
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 58 2e-09
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 58 2e-09
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 58 2e-09
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 58 4e-09
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 56 9e-09
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 56 2e-08
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 56 2e-08
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 55 2e-08
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 55 3e-08
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 54 5e-08
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 53 9e-08
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 53 1e-07
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 52 2e-07
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 52 2e-07
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 52 2e-07
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 52 2e-07
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 52 2e-07
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 52 3e-07
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 52 3e-07
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 52 3e-07
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 51 3e-07
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 51 3e-07
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 51 3e-07
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 51 3e-07
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 51 3e-07
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 51 5e-07
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 51 5e-07
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 50 6e-07
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 50 6e-07
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 50 6e-07
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 50 8e-07
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 50 8e-07
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 50 8e-07
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 50 1e-06
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 50 1e-06
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 49 1e-06
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 49 1e-06
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 49 1e-06
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 49 2e-06
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 49 2e-06
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 48 2e-06
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 48 2e-06
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 48 2e-06
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 48 2e-06
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 48 2e-06
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 48 2e-06
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 48 3e-06
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 48 3e-06
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 48 4e-06
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 47 6e-06
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 47 6e-06
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 47 6e-06
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 47 6e-06
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 47 6e-06
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 47 7e-06
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 46 1e-05
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 46 1e-05
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 46 1e-05
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 46 1e-05
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 46 1e-05
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 46 1e-05
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 46 1e-05
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 46 1e-05
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 46 2e-05
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 46 2e-05
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 45 2e-05
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 45 2e-05
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 45 2e-05
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 45 2e-05
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 45 3e-05
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 45 3e-05
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 45 3e-05
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 45 3e-05
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 45 3e-05
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 45 3e-05
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 44 4e-05
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 44 4e-05
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 44 4e-05
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 44 4e-05
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 44 5e-05
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 44 5e-05
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 44 5e-05
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 44 7e-05
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 44 7e-05
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 43 9e-05
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 43 1e-04
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 43 1e-04
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 43 1e-04
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 43 1e-04
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 42 2e-04
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 42 2e-04
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 42 2e-04
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 42 2e-04
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 42 3e-04
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 42 3e-04
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 42 3e-04
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 41 4e-04
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 41 4e-04
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 41 4e-04
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 41 4e-04
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 41 5e-04
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 40 7e-04
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 40 9e-04
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 40 9e-04
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 40 9e-04
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 40 9e-04
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 39 0.002
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 39 0.002
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 39 0.002
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 39 0.002
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 39 0.002
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 38 0.003
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 38 0.003
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 38 0.003
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 38 0.003
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 38 0.003
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 38 0.003
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 38 0.003
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 38 0.003
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 38 0.005
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 37 0.006
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 37 0.006
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 37 0.008
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 37 0.008
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 36 0.011
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 36 0.011
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 36 0.011
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 36 0.011
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 36 0.011
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 36 0.019
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 36 0.019
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 35 0.024
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 35 0.024
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 35 0.024
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 35 0.032
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 35 0.032
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 35 0.032
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 35 0.032
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 34 0.043
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 34 0.043
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 34 0.043
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 34 0.043
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 34 0.057
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 33 0.099
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.099
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 33 0.099
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 33 0.13
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 33 0.13
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 33 0.13
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 32 0.17
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 32 0.17
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 32 0.23
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 32 0.23
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 31 0.30
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 31 0.30
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 31 0.30
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 31 0.40
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 31 0.40
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 31 0.40
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 31 0.40
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 31 0.40
At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A... 31 0.40
At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A... 31 0.40
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 31 0.53
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 31 0.53
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 31 0.53
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 31 0.53
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 31 0.53
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 30 0.70
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 30 0.70
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 30 0.70
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 30 0.92
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 30 0.92
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 29 1.2
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 29 1.2
At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1 ... 29 1.2
At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEME... 29 1.2
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 29 1.2
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 29 1.2
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 29 1.2
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 29 1.6
At5g12920.1 68418.m01482 expressed protein contains 3 weak WD-40... 29 2.1
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 29 2.1
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 29 2.1
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 29 2.1
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 29 2.1
At5g60050.1 68418.m07530 PRLI-interacting factor-related contain... 28 2.8
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 28 2.8
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 28 2.8
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 28 2.8
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 28 3.7
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 27 4.9
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 27 4.9
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 27 4.9
At4g03970.1 68417.m00561 Ulp1 protease family protein contains P... 27 4.9
At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly id... 27 4.9
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 27 4.9
At4g04570.1 68417.m00670 protein kinase family protein contains ... 27 6.5
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 27 6.5
At2g18810.1 68415.m02189 hypothetical protein contains Pfam prof... 27 6.5
At1g26330.1 68414.m03211 hypothetical protein 27 6.5
At2g31720.1 68415.m03871 expressed protein contains Pfam profile... 27 8.6
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 198 bits (483), Expect = 2e-51
Identities = 92/134 (68%), Positives = 110/134 (82%)
Frame = +2
Query: 74 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 253
M+E L L+GT+R H VT IAT D+I+S+SRDK++I+WKLT+D+ YG+ Q+RL
Sbjct: 1 MAEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT 60
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 433
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLAAG +TRRF HTKDVLSVAFS+DNRQI
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQI 120
Query: 434 VSGSRDKTIKLWNT 475
VS SRD+TIKLWNT
Sbjct: 121 VSASRDRTIKLWNT 134
Score = 64.1 bits (149), Expect = 5e-11
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Frame = +2
Query: 35 RFRESSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLT 211
R R L+ + T+ G GH WV+ + +P I+S+S DKT+ VW L+
Sbjct: 125 RDRTIKLWNTLGECKYTISEGG--EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS 182
Query: 212 RDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 391
+ + L GH+ ++S V +S DG+ SG D + LWDLA GK E ++
Sbjct: 183 NCKL-----RSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV 237
Query: 392 DVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+ ++ FS NR + + + IK+W+
Sbjct: 238 -IHALCFS-PNRYWLCAATEHGIKIWD 262
Score = 59.3 bits (137), Expect = 1e-09
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 337
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEGG-EGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 177
Query: 338 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+W+L+ K HT V +VA S D SG +D + LW+
Sbjct: 178 VWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWD 222
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 196 bits (477), Expect = 8e-51
Identities = 90/134 (67%), Positives = 109/134 (81%)
Frame = +2
Query: 74 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 253
M+E L L+G +R H VT IAT D+I+++SRDK++I+WKLT+D+ +YG+ Q+RL
Sbjct: 1 MAEGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLT 60
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 433
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLA G+TTRRF HTKDVLSVAFS DNRQI
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 434 VSGSRDKTIKLWNT 475
VS SRD+TIKLWNT
Sbjct: 121 VSASRDRTIKLWNT 134
Score = 62.9 bits (146), Expect = 1e-10
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Frame = +2
Query: 110 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 286
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNSLVGHSGYLNTVAV 201
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
S DG+ SG D + LWDLA GK E + + S+ FS NR + + + +I++
Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFS-PNRYWLCAATENSIRI 259
Query: 467 WN 472
W+
Sbjct: 260 WD 261
Score = 56.4 bits (130), Expect = 9e-09
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 337
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEGD--GHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 338 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+W+L K H+ + +VA S D SG +D I LW+
Sbjct: 177 VWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWD 221
Score = 41.1 bits (92), Expect = 4e-04
Identities = 23/90 (25%), Positives = 44/90 (48%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 259
+ KLR +L GH+G++ +A +P + S +D +++W L + Y + + H
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSLEAGSII-H 238
Query: 260 SHFISDVVLSSDGNYALSGSWDKTLRLWDL 349
S + S Y L + + ++R+WDL
Sbjct: 239 S------LCFSPNRYWLCAATENSIRIWDL 262
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 193 bits (471), Expect = 4e-50
Identities = 88/134 (65%), Positives = 109/134 (81%)
Frame = +2
Query: 74 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 253
M+E L L+GT+ H VT IAT D+I++SSRDK++I+WKLT+++ +YG+ Q+R+
Sbjct: 1 MAEGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMT 60
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 433
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLA G++TRRF HTKDVLSVAFS DNRQI
Sbjct: 61 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 434 VSGSRDKTIKLWNT 475
VS SRD+TIKLWNT
Sbjct: 121 VSASRDRTIKLWNT 134
Score = 62.5 bits (145), Expect = 1e-10
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Frame = +2
Query: 110 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 286
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNTLAGHSGYLNTVAV 201
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
S DG+ SG D + LWDLA GK E + + S+ FS NR + + + +I++
Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFS-PNRYWLCAATENSIRI 259
Query: 467 WN 472
W+
Sbjct: 260 WD 261
Score = 57.2 bits (132), Expect = 5e-09
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 337
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEAD--GHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 338 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+W+L K H+ + +VA S D SG +D I LW+
Sbjct: 177 VWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWD 221
Score = 44.4 bits (100), Expect = 4e-05
Identities = 32/127 (25%), Positives = 58/127 (45%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 259
+ KLR TL GH+G++ +A +P + S +D +++W L + Y + + H
Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSLEAGSII-H 238
Query: 260 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 439
S + S Y L + + ++R+WDL + ED D+ + A D +
Sbjct: 239 S------LCFSPNRYWLCAATENSIRIWDLESKSVV---EDLKVDLKAEAEKTDGSTGI- 288
Query: 440 GSRDKTI 460
G++ K I
Sbjct: 289 GNKTKVI 295
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 83.0 bits (196), Expect = 9e-17
Identities = 38/105 (36%), Positives = 63/105 (60%)
Frame = +2
Query: 155 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 334
P+ ++S S D T+ +W+ + + P+KRL GH ++ V S DG + S S+DK++
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQ----PKKRLTGHQQLVNHVYFSPDGKWIASASFDKSV 384
Query: 335 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
RLW+ G+ F H V V++S D+R ++SGS+D T+K+W
Sbjct: 385 RLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIW 429
Score = 61.7 bits (143), Expect = 2e-10
Identities = 38/122 (31%), Positives = 59/122 (48%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
L GH V + +P I S+S DK++ +W G GH + V
Sbjct: 356 LTGHQQLVNHVYFSPD-GKWIASASFDKSVRLWN-----GITGQFVTVFRGHVGPVYQVS 409
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
S+D LSGS D TL++W++ K + H +V +V +S D ++VSG +D+ +K
Sbjct: 410 WSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLK 469
Query: 464 LW 469
LW
Sbjct: 470 LW 471
Score = 57.2 bits (132), Expect = 5e-09
Identities = 30/73 (41%), Positives = 39/73 (53%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 433
GH+ + V S DG SGS D T+RLWDL + H VL+VA+S D + +
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHL 166
Query: 434 VSGSRDKTIKLWN 472
VSGS+ I WN
Sbjct: 167 VSGSKSGEICCWN 179
Score = 53.2 bits (122), Expect = 9e-08
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
T +GH WV +A +P ++ S S+ + W + E G P L GH +I+ +
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLV-SGSKSGEICCWNPKKGELE-GSP---LTGHKKWITGI 200
Query: 281 V-----LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 445
LSS ++ S D R+WD+ K+ HT V V + D I +GS
Sbjct: 201 SWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGI-IYTGS 259
Query: 446 RDKTIKLWNT 475
+D TIK+W T
Sbjct: 260 QDCTIKMWET 269
Score = 46.0 bits (104), Expect = 1e-05
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 3/137 (2%)
Frame = +2
Query: 71 KMSETL--KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQK 244
KM ET KL L+GH W+ +A + +Y ++ + + D T + ++ QK
Sbjct: 265 KMWETTQGKLIRELKGHGHWINSLALSTEY--VLRTGAFDHTGRQYPPNEEK------QK 316
Query: 245 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVD 421
L ++ D +SGS D T+ LW+ + K + R H + V V FS D
Sbjct: 317 ALERYNKTKGD-----SPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPD 371
Query: 422 NRQIVSGSRDKTIKLWN 472
+ I S S DK+++LWN
Sbjct: 372 GKWIASASFDKSVRLWN 388
Score = 36.7 bits (81), Expect = 0.008
Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
T+ GH V ++ +P + S S D T+ +W L + P GH +++ V
Sbjct: 104 TIAGHAEAVLCVSFSPD-GKQLASGSGDTTVRLWDLYTET-----PLFTCKGHKNWVLTV 157
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAGKTT-RRFEDHTKDVLSVAF-----SVDNRQIVSG 442
S DG + +SGS + W+ G+ H K + +++ S R+ V+
Sbjct: 158 AWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTS 217
Query: 443 SRDKTIKLWN 472
S+D ++W+
Sbjct: 218 SKDGDARIWD 227
Score = 33.1 bits (72), Expect = 0.099
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL-SGSWDKTLR 337
+I + S+D T+ +W+ T+ G + L GH H+I+ + LS++ Y L +G++D T R
Sbjct: 254 IIYTGSQDCTIKMWETTQ-----GKLIRELKGHGHWINSLALSTE--YVLRTGAFDHTGR 306
Query: 338 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
+ K + E + K ++VSGS D T+ LW
Sbjct: 307 QYPPNEEK-QKALERYNK-----TKGDSPERLVSGSDDFTMFLW 344
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 81.4 bits (192), Expect = 3e-16
Identities = 42/124 (33%), Positives = 66/124 (53%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
TL HN V+ + + ++ S+S DKT+ + + + P + GH + ISDV
Sbjct: 19 TLTSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
SSD + +S S DKTL+LWD+ G + HT V F+ + IVSGS D+T+
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETV 137
Query: 461 KLWN 472
++W+
Sbjct: 138 RIWD 141
Score = 68.9 bits (161), Expect = 2e-12
Identities = 39/122 (31%), Positives = 65/122 (53%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 289
GH ++ +A + I+S+S DKTL +W + G K L GH+++ V +
Sbjct: 69 GHENGISDVAFSSD-ARFIVSASDDKTLKLWDVET-----GSLIKTLIGHTNYAFCVNFN 122
Query: 290 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
N +SGS+D+T+R+WD+ GK + H+ V +V F+ D IVS S D ++W
Sbjct: 123 PQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIW 182
Query: 470 NT 475
++
Sbjct: 183 DS 184
Score = 57.2 bits (132), Expect = 5e-09
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Frame = +2
Query: 233 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL-----AAGKTTRRFEDHTKDV 397
+ + L H+ +S V SSDG S S DKT+R + + + + F H +
Sbjct: 15 VHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGI 74
Query: 398 LSVAFSVDNRQIVSGSRDKTIKLWN 472
VAFS D R IVS S DKT+KLW+
Sbjct: 75 SDVAFSSDARFIVSASDDKTLKLWD 99
Score = 56.0 bits (129), Expect = 1e-08
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Frame = +2
Query: 83 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 262
T K L H+ VT + N + +I+SSS D +W D + + +
Sbjct: 144 TGKCLKVLPAHSDPVTAVDFN-RDGSLIVSSSYDGLCRIW----DSGTGHCVKTLIDDEN 198
Query: 263 HFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH--TKDVLSVAFSVDN-RQI 433
+S V S +G + L G+ D TLRLW++++ K + + H + +S AFSV N ++I
Sbjct: 199 PPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRI 258
Query: 434 VSGSRDKTIKLW 469
VSGS D + +W
Sbjct: 259 VSGSEDNCVHMW 270
Score = 55.6 bits (128), Expect = 2e-08
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH---SHFISDVVLSSDGNYALSGSWDKTL 334
IL + D TL +W ++ + K GH + IS ++G +SGS D +
Sbjct: 213 ILVGTLDNTLRLWNISSAKF-----LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCV 267
Query: 335 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
+W+L + K ++ E HT+ V++VA I SGS DKT+++W
Sbjct: 268 HMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 76.2 bits (179), Expect = 1e-14
Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
TL GH ++ + + +++ S+S DKT+I+W T NY + R GHS ISD+
Sbjct: 38 TLEGHTAAISCVKFSND-GNLLASASVDKTMILWSAT----NYSLIH-RYEGHSSGISDL 91
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 457
SSD +Y S S D TLR+WD + + + HT V V F+ + IVSGS D+T
Sbjct: 92 AWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDET 151
Query: 458 IKLW 469
I++W
Sbjct: 152 IRIW 155
Score = 68.5 bits (160), Expect = 2e-12
Identities = 39/121 (32%), Positives = 65/121 (53%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 289
GH+ ++ +A + S+S D TL +W D + K L GH++F+ V +
Sbjct: 83 GHSSGISDLAWSSD-SHYTCSASDDCTLRIW----DARSPYECLKVLRGHTNFVFCVNFN 137
Query: 290 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
N +SGS+D+T+R+W++ GK R + H+ + SV F+ D IVS S D + K+W
Sbjct: 138 PPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW 197
Query: 470 N 472
+
Sbjct: 198 D 198
Score = 58.8 bits (136), Expect = 2e-09
Identities = 29/77 (37%), Positives = 42/77 (54%)
Frame = +2
Query: 242 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 421
K L GH+ IS V S+DGN S S DKT+ LW R+E H+ + +A+S D
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSD 96
Query: 422 NRQIVSGSRDKTIKLWN 472
+ S S D T+++W+
Sbjct: 97 SHYTCSASDDCTLRIWD 113
Score = 56.8 bits (131), Expect = 7e-09
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
LRGH +V + NP ++I+S S D+T+ +W++ G + + HS IS V
Sbjct: 124 LRGHTNFVFCVNFNPP-SNLIVSGSFDETIRIWEVKT-----GKCVRMIKAHSMPISSVH 177
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQIVSGSRDKTI 460
+ DG+ +S S D + ++WD G + D +S A FS + + I+ + D T+
Sbjct: 178 FNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTL 237
Query: 461 KLWN 472
KL N
Sbjct: 238 KLSN 241
Score = 50.0 bits (114), Expect = 8e-07
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Frame = +2
Query: 290 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQIVSGSR-DKTIK 463
++G Y +SGS D + LWDL A +R E HT V+SV+ V N SG+ DKTI+
Sbjct: 268 TNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIR 327
Query: 464 LW 469
+W
Sbjct: 328 IW 329
Score = 49.6 bits (113), Expect = 1e-06
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
++ H+ ++ + N + +I+S+S D + +W D + + S +S
Sbjct: 166 IKAHSMPISSVHFN-RDGSLIVSASHDGSCKIW----DAKEGTCLKTLIDDKSPAVSFAK 220
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV--AFSVDN-RQIVSGSRDK 454
S +G + L + D TL+L + A GK + + HT V + AFSV N + IVSGS D
Sbjct: 221 FSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDN 280
Query: 455 TIKLWN 472
+ LW+
Sbjct: 281 CVYLWD 286
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 74.9 bits (176), Expect = 2e-14
Identities = 45/122 (36%), Positives = 64/122 (52%)
Frame = +2
Query: 107 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 286
+GHN V +P + S S D+T +W + R + P + + GH +SDV
Sbjct: 457 KGHNYPVWDAQFSP-FGHYFASCSHDRTARIWSMDRIQ-----PLRIMAGH---LSDVDW 507
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
+ NY +GS DKT+RLWD+ G+ R F H VLS+A S D R + SG D TI +
Sbjct: 508 HPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMM 567
Query: 467 WN 472
W+
Sbjct: 568 WD 569
Score = 62.1 bits (144), Expect = 2e-10
Identities = 36/123 (29%), Positives = 60/123 (48%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
LR G ++ + +P + I + S DKT+ +W + E + GH + +
Sbjct: 495 LRIMAGHLSDVDWHPNC-NYIATGSSDKTVRLWDVQTGEC-----VRIFIGHRSMVLSLA 548
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
+S DG Y SG D T+ +WDL+ + H V S+++S + + SGS D T+K
Sbjct: 549 MSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVK 608
Query: 464 LWN 472
LW+
Sbjct: 609 LWD 611
Score = 57.6 bits (133), Expect = 4e-09
Identities = 40/123 (32%), Positives = 61/123 (49%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
L GH+G V +P D +LSSS D T+ +W + N + K GH++ + D
Sbjct: 414 LLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWSTKLNANL--VCYK---GHNYPVWDAQ 467
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
S G+Y S S D+T R+W + + R H D V + + I +GS DKT++
Sbjct: 468 FSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSD---VDWHPNCNYIATGSSDKTVR 524
Query: 464 LWN 472
LW+
Sbjct: 525 LWD 527
Score = 38.3 bits (85), Expect = 0.003
Identities = 25/91 (27%), Positives = 42/91 (46%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 289
GH V +A +P M S D T+++W L+ L GH+ + + S
Sbjct: 539 GHRSMVLSLAMSPDGRYMA-SGDEDGTIMMWDLSTARCI-----TPLMGHNSCVWSLSYS 592
Query: 290 SDGNYALSGSWDKTLRLWDLAAGKTTRRFED 382
+G+ SGS D T++LWD+ + + E+
Sbjct: 593 GEGSLLASGSADCTVKLWDVTSSTKLTKAEE 623
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 72.1 bits (169), Expect = 2e-13
Identities = 37/121 (30%), Positives = 64/121 (52%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 289
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ + L G + D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHLKGVN--CVDYFTG 196
Query: 290 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
D Y ++GS D T ++WD + E HT +V +V+F + I++GS D T+++W
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
Query: 470 N 472
+
Sbjct: 257 H 257
Score = 31.5 bits (68), Expect = 0.30
Identities = 24/99 (24%), Positives = 43/99 (43%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 343
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
Query: 344 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
+ + V ++ +R++V G + +I
Sbjct: 257 HATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSI 295
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 70.9 bits (166), Expect = 4e-13
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 283
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
D Y ++GS D T ++WD + E HT +V +V F + I++GS D T++
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Query: 464 LWN 472
+W+
Sbjct: 255 IWH 257
Score = 51.2 bits (117), Expect = 3e-07
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFS-VDNRQ 430
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+ D
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNT 157
Query: 431 IVSGSRDKTIKLWN 472
S S D+TIK+WN
Sbjct: 158 FASASLDRTIKIWN 171
Score = 35.5 bits (78), Expect = 0.019
Identities = 25/99 (25%), Positives = 44/99 (44%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 343
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Query: 344 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
+ + V ++ + +R++V G + TI
Sbjct: 257 HATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 70.5 bits (165), Expect = 5e-13
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Frame = +2
Query: 83 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 262
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 263 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIV 436
+ V +S S+ N+ +SGS D T RLWD AA + R F H DV +V F D +
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFG 264
Query: 437 SGSRDKTIKLWN 472
+GS D T +L++
Sbjct: 265 TGSDDGTCRLYD 276
Score = 50.4 bits (115), Expect = 6e-07
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 289
GH V ++ + P+ +S S D T +W TR + + +GH ++ V
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWD-TRAASR---AVRTFHGHEGDVNTVKFF 257
Query: 290 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH----TKDVLSVAFSVDNRQIVSG-SRDK 454
DG +GS D T RL+D+ G + ++ H V S+AFSV R + +G + +
Sbjct: 258 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNN 317
Query: 455 TIKLWNT 475
T +W+T
Sbjct: 318 TCYVWDT 324
Score = 29.9 bits (64), Expect = 0.92
Identities = 16/77 (20%), Positives = 35/77 (45%)
Frame = +2
Query: 242 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 421
+ L GH+ + + + + N +S S D L +W+ + T + V++ AFS +
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 422 NRQIVSGSRDKTIKLWN 472
+ + G D +++
Sbjct: 119 GQSVACGGLDSVCSIFS 135
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 70.5 bits (165), Expect = 5e-13
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Frame = +2
Query: 83 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 262
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 142
Query: 263 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIV 436
+ V +S S+ N+ +SGS D T RLWD AA + R F H DV +V F D +
Sbjct: 143 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFG 202
Query: 437 SGSRDKTIKLWN 472
+GS D T +L++
Sbjct: 203 TGSDDGTCRLYD 214
Score = 50.4 bits (115), Expect = 6e-07
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 289
GH V ++ + P+ +S S D T +W TR + + +GH ++ V
Sbjct: 140 GHTADVLSVSISGSNPNWFISGSCDSTARLWD-TRAASR---AVRTFHGHEGDVNTVKFF 195
Query: 290 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH----TKDVLSVAFSVDNRQIVSG-SRDK 454
DG +GS D T RL+D+ G + ++ H V S+AFSV R + +G + +
Sbjct: 196 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNN 255
Query: 455 TIKLWNT 475
T +W+T
Sbjct: 256 TCYVWDT 262
Score = 39.9 bits (89), Expect = 9e-04
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--NYGIPQKRLYGHSHFISDVV 283
G NG VT IA + + + + T VW E + G+ Q H + IS +
Sbjct: 230 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 286
Query: 284 LSSDGNYALSGSWDKTLRLW 343
LS+DG+ +GSWD L++W
Sbjct: 287 LSADGSALCTGSWDSNLKIW 306
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 70.5 bits (165), Expect = 5e-13
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Frame = +2
Query: 83 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 262
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 263 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIV 436
+ V +S S+ N+ +SGS D T RLWD AA + R F H DV +V F D +
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFG 264
Query: 437 SGSRDKTIKLWN 472
+GS D T +L++
Sbjct: 265 TGSDDGTCRLYD 276
Score = 50.4 bits (115), Expect = 6e-07
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 289
GH V ++ + P+ +S S D T +W TR + + +GH ++ V
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWD-TRAASR---AVRTFHGHEGDVNTVKFF 257
Query: 290 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH----TKDVLSVAFSVDNRQIVSG-SRDK 454
DG +GS D T RL+D+ G + ++ H V S+AFSV R + +G + +
Sbjct: 258 PDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNN 317
Query: 455 TIKLWNT 475
T +W+T
Sbjct: 318 TCYVWDT 324
Score = 39.9 bits (89), Expect = 9e-04
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--NYGIPQKRLYGHSHFISDVV 283
G NG VT IA + + + + T VW E + G+ Q H + IS +
Sbjct: 292 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 348
Query: 284 LSSDGNYALSGSWDKTLRLW 343
LS+DG+ +GSWD L++W
Sbjct: 349 LSADGSALCTGSWDSNLKIW 368
Score = 29.9 bits (64), Expect = 0.92
Identities = 16/77 (20%), Positives = 35/77 (45%)
Frame = +2
Query: 242 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 421
+ L GH+ + + + + N +S S D L +W+ + T + V++ AFS +
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 422 NRQIVSGSRDKTIKLWN 472
+ + G D +++
Sbjct: 119 GQSVACGGLDSVCSIFS 135
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 70.1 bits (164), Expect = 7e-13
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
L GH V + NP +I S S D+ + +W++ D N+ + L GH + I D+
Sbjct: 49 LSGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMV----LKGHKNAILDLH 103
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTI 460
+SDG+ +S S DKT+R WD+ GK ++ +H+ V S + I+SGS D T
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTA 163
Query: 461 KLWN 472
KLW+
Sbjct: 164 KLWD 167
Score = 49.6 bits (113), Expect = 1e-06
Identities = 30/131 (22%), Positives = 56/131 (42%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 259
ET K + H+ +V + P +I+S S D T +W + + P K
Sbjct: 126 ETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDK----- 180
Query: 260 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 439
+ I+ V S + +G D +++WDL G+ T E H + ++ S D +++
Sbjct: 181 -YQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLT 239
Query: 440 GSRDKTIKLWN 472
D + +W+
Sbjct: 240 NGMDNKLCVWD 250
Score = 48.8 bits (111), Expect = 2e-06
Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
TL GH +T ++ +P +L++ D L VW + R K GH H
Sbjct: 217 TLEGHQDTITGMSLSPD-GSYLLTNGMDNKLCVWDM-RPYAPQNRCVKIFEGHQHNFEKN 274
Query: 281 VL----SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 448
+L S DG +GS D+ + +WD + +T + HT V F I S S
Sbjct: 275 LLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSS 334
Query: 449 DKTIKL 466
DK I L
Sbjct: 335 DKNIYL 340
Score = 43.2 bits (97), Expect = 9e-05
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 236 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAF 412
P L GH + + + G SGS D+ + LW + K + H +L + +
Sbjct: 45 PIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHW 104
Query: 413 SVDNRQIVSGSRDKTIKLWN 472
+ D QIVS S DKT++ W+
Sbjct: 105 TSDGSQIVSASPDKTVRAWD 124
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 69.7 bits (163), Expect = 9e-13
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 283
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
D Y ++GS D T ++WD + + HT +V +V F + I++GS D T++
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Query: 464 LWN 472
+W+
Sbjct: 255 IWH 257
Score = 50.8 bits (116), Expect = 5e-07
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFS-VDNRQ 430
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+ D
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 431 IVSGSRDKTIKLWN 472
S S D+TIK+WN
Sbjct: 158 FASASLDRTIKIWN 171
Score = 35.1 bits (77), Expect = 0.024
Identities = 25/99 (25%), Positives = 44/99 (44%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 343
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Query: 344 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
+ + V ++ + +R++V G + TI
Sbjct: 257 HATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 69.7 bits (163), Expect = 9e-13
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 283
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
D Y ++GS D T ++WD + + HT +V +V F + I++GS D T++
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Query: 464 LWN 472
+W+
Sbjct: 255 IWH 257
Score = 50.8 bits (116), Expect = 5e-07
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFS-VDNRQ 430
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+ D
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 431 IVSGSRDKTIKLWN 472
S S D+TIK+WN
Sbjct: 158 FASASLDRTIKIWN 171
Score = 35.1 bits (77), Expect = 0.024
Identities = 25/99 (25%), Positives = 44/99 (44%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 343
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Query: 344 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
+ + V ++ + +R++V G + TI
Sbjct: 257 HATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 69.7 bits (163), Expect = 9e-13
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 283
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
D Y ++GS D T ++WD + + HT +V +V F + I++GS D T++
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Query: 464 LWN 472
+W+
Sbjct: 255 IWH 257
Score = 50.8 bits (116), Expect = 5e-07
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFS-VDNRQ 430
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+ D
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 431 IVSGSRDKTIKLWN 472
S S D+TIK+WN
Sbjct: 158 FASASLDRTIKIWN 171
Score = 35.1 bits (77), Expect = 0.024
Identities = 25/99 (25%), Positives = 44/99 (44%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 343
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Query: 344 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
+ + V ++ + +R++V G + TI
Sbjct: 257 HATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 68.5 bits (160), Expect = 2e-12
Identities = 40/131 (30%), Positives = 62/131 (47%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 259
E K+ GH + + +P + + + S S D L VW D G Q GH
Sbjct: 37 EESKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDTNLRVW----DTRKKGCIQT-YKGH 90
Query: 260 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 439
+ IS + S DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 91 TRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLAT 150
Query: 440 GSRDKTIKLWN 472
GS D+T+K W+
Sbjct: 151 GSADRTVKFWD 161
Score = 50.0 bits (114), Expect = 8e-07
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 427
L GH+ + V +S+ L+G+ ++LWDL K R F H + +V F
Sbjct: 3 LCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGE 62
Query: 428 QIVSGSRDKTIKLWNT 475
+ SGS D +++W+T
Sbjct: 63 FLASGSSDTNLRVWDT 78
Score = 29.9 bits (64), Expect = 0.92
Identities = 27/117 (23%), Positives = 44/117 (37%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
T +GH ++ I +P ++S D + VW LT G H I +
Sbjct: 86 TYKGHTRGISTIEFSPD-GRWVVSGGLDNVVKVWDLTA-----GKLLHEFKCHEGPIRSL 139
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 451
+GS D+T++ WDL + V ++AF D + + G D
Sbjct: 140 DFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDD 196
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 68.1 bits (159), Expect = 3e-12
Identities = 38/129 (29%), Positives = 61/129 (47%)
Frame = +2
Query: 86 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 265
LK R + H+ + +A + ++ + S D+T +W+L + L GH
Sbjct: 489 LKTRSVVAAHDKDINSVAV-ARNDSLVCTGSEDRTASIWRLPDL-----VHVVTLKGHKR 542
Query: 266 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 445
I V S+ ++ S DKT+++W ++ G + FE HT VL +F D Q VS
Sbjct: 543 RIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCG 602
Query: 446 RDKTIKLWN 472
D +KLWN
Sbjct: 603 ADGLLKLWN 611
Score = 64.9 bits (151), Expect = 3e-11
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 6/137 (4%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 259
ETLK + +GH G V +A + ++ ++ D+ ++VW + + G GH
Sbjct: 90 ETLKCIRSWKGHEGPVMGMACHAS-GGLLATAGADRKVLVWDV-----DGGFCTHYFRGH 143
Query: 260 SHFISDVVLSSDGN--YALSGSWDKTLRLWDLAAGKTTRR----FEDHTKDVLSVAFSVD 421
+S ++ D N +SGS D T+R+WDL A T ++ E H V S+A S D
Sbjct: 144 KGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSED 203
Query: 422 NRQIVSGSRDKTIKLWN 472
+ S RDK + LW+
Sbjct: 204 GLTLFSAGRDKVVNLWD 220
Score = 59.7 bits (138), Expect = 1e-09
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Frame = +2
Query: 98 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL--TRDENNYGIPQKR---LYGHS 262
G GHNG + +A K +S S D+TL VW L +++ I K + H
Sbjct: 440 GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHD 499
Query: 263 HFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSG 442
I+ V ++ + + +GS D+T +W L + H + + SV FS ++ +++
Sbjct: 500 KDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTA 559
Query: 443 SRDKTIKLW 469
S DKT+K+W
Sbjct: 560 SGDKTVKIW 568
Score = 51.6 bits (118), Expect = 3e-07
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Frame = +2
Query: 248 LYGHSHFIS--DVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 418
L GH + D +SS GN + +GS DKT+RLW+ + H D+L+VAF+
Sbjct: 397 LAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAK 456
Query: 419 DNRQ-IVSGSRDKTIKLWN 472
+ VSGS D+T+K+W+
Sbjct: 457 KSFSFFVSGSGDRTLKVWS 475
Score = 48.8 bits (111), Expect = 2e-06
Identities = 29/124 (23%), Positives = 55/124 (44%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
TL+GH + + + ++++S DKT+ +W ++ G K GH+ +
Sbjct: 536 TLKGHKRRIFSVEFST-VDQCVMTASGDKTVKIWAISD-----GSCLKTFEGHTSSVLRA 589
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
+DG +S D L+LW++ + ++ H V ++A I +G D I
Sbjct: 590 SFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVI 649
Query: 461 KLWN 472
LW+
Sbjct: 650 NLWH 653
Score = 46.0 bits (104), Expect = 1e-05
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 13/142 (9%)
Frame = +2
Query: 83 TLKLRGTLRGHNGWVTQIAT--NPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 256
T+ L GH V + T + +I++ S+DKT+ +W T ++ G+ G
Sbjct: 390 TMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNAT-SKSCIGVGT----G 444
Query: 257 HSHFISDVVLSSDG-NYALSGSWDKTLRLWDLAA----------GKTTRRFEDHTKDVLS 403
H+ I V + ++ +SGS D+TL++W L KT H KD+ S
Sbjct: 445 HNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINS 504
Query: 404 VAFSVDNRQIVSGSRDKTIKLW 469
VA + ++ + +GS D+T +W
Sbjct: 505 VAVARNDSLVCTGSEDRTASIW 526
Score = 44.0 bits (99), Expect = 5e-05
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +2
Query: 107 RGHNGWVTQIATNP-KYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
RGH G V+ I +P ++++S S D T+ VW L +N + H ++ +
Sbjct: 141 RGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNA-KNTEKKCLAIMEKHFSAVTSIA 199
Query: 284 LSSDGNYALSGSWDKTLRLWDL 349
LS DG S DK + LWDL
Sbjct: 200 LSEDGLTLFSAGRDKVVNLWDL 221
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 67.3 bits (157), Expect = 5e-12
Identities = 38/131 (29%), Positives = 63/131 (48%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 259
E K+ GH + + +P + + + S S D L +W + + G Q GH
Sbjct: 88 EEAKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDANLKIWDIRKK----GCIQT-YKGH 141
Query: 260 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 439
S IS + + DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 142 SRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLAT 201
Query: 440 GSRDKTIKLWN 472
GS D+T+K W+
Sbjct: 202 GSADRTVKFWD 212
Score = 47.2 bits (107), Expect = 6e-06
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 427
L GH+ + V S L+G+ ++LWD+ K R F H + +V F
Sbjct: 54 LCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGE 113
Query: 428 QIVSGSRDKTIKLWN 472
+ SGS D +K+W+
Sbjct: 114 FLASGSSDANLKIWD 128
Score = 31.5 bits (68), Expect = 0.30
Identities = 29/124 (23%), Positives = 49/124 (39%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
T +GH+ ++ I P ++S D + VW LT G H I +
Sbjct: 137 TYKGHSRGISTIRFTPD-GRWVVSGGLDNVVKVWDLTA-----GKLLHEFKFHEGPIRSL 190
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
+GS D+T++ WDL + V S+ F D R + G D ++
Sbjct: 191 DFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLFCG-LDDSL 249
Query: 461 KLWN 472
K+++
Sbjct: 250 KVYS 253
Score = 31.1 bits (67), Expect = 0.40
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 308 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
++G D + LW + + HT V SVAF +++G+ IKLW+
Sbjct: 32 ITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWD 86
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 66.9 bits (156), Expect = 7e-12
Identities = 33/106 (31%), Positives = 59/106 (55%)
Frame = +2
Query: 158 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 337
+M+ S S+D + +W++ G+ +R HS ++ + S DG+ LS S+D+T R
Sbjct: 276 EMLASGSQDGKIKIWRIRT-----GVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTAR 330
Query: 338 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 475
+ L +GK + F HT V F+ D +I++ S D T+K+W++
Sbjct: 331 IHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDS 376
Score = 49.6 bits (113), Expect = 1e-06
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
Frame = +2
Query: 164 ILSSSRDKTLIVW-----KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDK 328
+ SSS D + VW KL +D Y + + H + + S D SGS D
Sbjct: 228 LASSSVDGFIEVWDYISGKLKKDLQ-YQADESFMM-HDDPVLCIDFSRDSEMLASGSQDG 285
Query: 329 TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
+++W + G RRF+ H++ V S++FS D Q++S S D+T ++
Sbjct: 286 KIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARI 331
Score = 43.2 bits (97), Expect = 9e-05
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Frame = +2
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTR--------RFEDHTKDVLSVAFSVDNRQIVSG 442
S DG + S S D + +WD +GK + F H VL + FS D+ + SG
Sbjct: 222 SPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASG 281
Query: 443 SRDKTIKLW 469
S+D IK+W
Sbjct: 282 SQDGKIKIW 290
Score = 33.1 bits (72), Expect = 0.099
Identities = 31/130 (23%), Positives = 53/130 (40%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 259
+T K LRG + V I PK + I+ ++ ++ + L R G
Sbjct: 383 QTFKPPPPLRGTDASVNSIHLFPKNTEHIVVCNKTSSIYIMTLQGQVVKSFSSGNREGGD 442
Query: 260 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 439
F++ V S+ G++ DK L ++ +G H KDV+ + + +
Sbjct: 443 --FVAACV-STKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITHHPHRNLLAT 499
Query: 440 GSRDKTIKLW 469
S D T+KLW
Sbjct: 500 YSEDCTMKLW 509
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 65.7 bits (153), Expect = 2e-11
Identities = 36/131 (27%), Positives = 62/131 (47%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 259
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 182 EEAKVVRTLTGHRSNCVSVNFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 235
Query: 260 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 439
+ ++ + + DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 236 TRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLAT 295
Query: 440 GSRDKTIKLWN 472
GS DKT+K W+
Sbjct: 296 GSADKTVKFWD 306
Score = 52.8 bits (121), Expect = 1e-07
Identities = 25/75 (33%), Positives = 35/75 (46%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 427
LYGHS I V + +G+ T++LWDL K R H + +SV F
Sbjct: 148 LYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGE 207
Query: 428 QIVSGSRDKTIKLWN 472
SGS D +K+W+
Sbjct: 208 FFASGSLDTNLKIWD 222
Score = 34.3 bits (75), Expect = 0.043
Identities = 29/124 (23%), Positives = 50/124 (40%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
T +GH V + P I+S D + VW LT G H I +
Sbjct: 231 TYKGHTRGVNVLRFTPD-GRWIVSGGEDNVVKVWDLTA-----GKLLHEFKSHEGKIQSL 284
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
+GS DKT++ WDL + T V + F+ D + ++ G ++ ++
Sbjct: 285 DFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQE-SL 343
Query: 461 KLWN 472
K+++
Sbjct: 344 KIFS 347
Score = 32.3 bits (70), Expect = 0.17
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = +2
Query: 308 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
++G D + LW + H+ + SV F + +G+ TIKLW+
Sbjct: 126 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWD 180
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 64.9 bits (151), Expect = 3e-11
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Frame = +2
Query: 89 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 268
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 269 ISDVV-LSSDGNY----ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 433
+ + + Y +SGS D + +W+L G+ + + H V VA +DN I
Sbjct: 69 VGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDI 126
Query: 434 VSGSRDKTIKLW 469
VS S D+T+K W
Sbjct: 127 VSSSVDQTLKRW 138
Score = 50.8 bits (116), Expect = 5e-07
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Frame = +2
Query: 104 LRGHNGWVTQIATNP---KYPD-MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 271
L GH +V +A P +YP+ ++S S D + VW L EN + L GH +
Sbjct: 62 LLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENI-----QTLKGHQMQV 116
Query: 272 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 451
+ V + D +S S D+TL+ W G+ ++ H + +V + + ++VSGS D
Sbjct: 117 TGVAI--DNEDIVSSSVDQTLKRW--RNGQLVESWDAHQSPIQAV-IRLPSGELVSGSSD 171
Query: 452 KTIKLW 469
++KLW
Sbjct: 172 ASLKLW 177
Score = 33.5 bits (73), Expect = 0.075
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Frame = +2
Query: 215 DENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED---- 382
D N Y + + L+GH + + + +D N A S S D+T+R+W L + +
Sbjct: 6 DFNEYKL-RCELHGHDDDVRGICVCNDENIATS-SRDRTIRVWSLDPSDKRKYTSEKILL 63
Query: 383 -HTKDVLSVAF-----SVDNRQIVSGSRDKTIKLWN 472
HT V +A+ ++VSGS D + +WN
Sbjct: 64 GHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWN 99
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 64.9 bits (151), Expect = 3e-11
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Frame = +2
Query: 89 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 268
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 269 ISDVV-LSSDGNY----ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 433
+ + + Y +SGS D + +W+L G+ + + H V VA +DN I
Sbjct: 69 VGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDI 126
Query: 434 VSGSRDKTIKLW 469
VS S D+T+K W
Sbjct: 127 VSSSVDQTLKRW 138
Score = 50.8 bits (116), Expect = 5e-07
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Frame = +2
Query: 104 LRGHNGWVTQIATNP---KYPD-MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 271
L GH +V +A P +YP+ ++S S D + VW L EN + L GH +
Sbjct: 62 LLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENI-----QTLKGHQMQV 116
Query: 272 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 451
+ V + D +S S D+TL+ W G+ ++ H + +V + + ++VSGS D
Sbjct: 117 TGVAI--DNEDIVSSSVDQTLKRW--RNGQLVESWDAHQSPIQAV-IRLPSGELVSGSSD 171
Query: 452 KTIKLW 469
++KLW
Sbjct: 172 ASLKLW 177
Score = 33.5 bits (73), Expect = 0.075
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Frame = +2
Query: 215 DENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED---- 382
D N Y + + L+GH + + + +D N A S S D+T+R+W L + +
Sbjct: 6 DFNEYKL-RCELHGHDDDVRGICVCNDENIATS-SRDRTIRVWSLDPSDKRKYTSEKILL 63
Query: 383 -HTKDVLSVAF-----SVDNRQIVSGSRDKTIKLWN 472
HT V +A+ ++VSGS D + +WN
Sbjct: 64 GHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWN 99
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 64.5 bits (150), Expect = 3e-11
Identities = 35/131 (26%), Positives = 62/131 (47%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 259
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 142
Query: 260 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 439
+ ++ + + DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLAT 202
Query: 440 GSRDKTIKLWN 472
GS D+T+K W+
Sbjct: 203 GSADRTVKFWD 213
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/75 (33%), Positives = 35/75 (46%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 427
LYGHS I V + +G+ T++LWDL K R H + +SV F
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
Query: 428 QIVSGSRDKTIKLWN 472
SGS D +K+W+
Sbjct: 115 FFASGSLDTNLKIWD 129
Score = 32.3 bits (70), Expect = 0.17
Identities = 27/124 (21%), Positives = 51/124 (41%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
T +GH V + P ++S D + VW LT G H I +
Sbjct: 138 TYKGHTRGVNVLRFTPD-GRWVVSGGEDNIVKVWDLTA-----GKLLTEFKSHEGQIQSL 191
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
+GS D+T++ WDL + T V ++F+ D + ++ G ++ ++
Sbjct: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQE-SL 250
Query: 461 KLWN 472
K+++
Sbjct: 251 KIFS 254
Score = 31.9 bits (69), Expect = 0.23
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = +2
Query: 308 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
++G D + LW + H+ + SV F + +G+ TIKLW+
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD 87
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 64.5 bits (150), Expect = 3e-11
Identities = 35/131 (26%), Positives = 62/131 (47%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 259
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 142
Query: 260 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 439
+ ++ + + DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLAT 202
Query: 440 GSRDKTIKLWN 472
GS D+T+K W+
Sbjct: 203 GSADRTVKFWD 213
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/75 (33%), Positives = 35/75 (46%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 427
LYGHS I V + +G+ T++LWDL K R H + +SV F
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
Query: 428 QIVSGSRDKTIKLWN 472
SGS D +K+W+
Sbjct: 115 FFASGSLDTNLKIWD 129
Score = 32.3 bits (70), Expect = 0.17
Identities = 27/124 (21%), Positives = 51/124 (41%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
T +GH V + P ++S D + VW LT G H I +
Sbjct: 138 TYKGHTRGVNVLRFTPD-GRWVVSGGEDNIVKVWDLTA-----GKLLTEFKSHEGQIQSL 191
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
+GS D+T++ WDL + T V ++F+ D + ++ G ++ ++
Sbjct: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQE-SL 250
Query: 461 KLWN 472
K+++
Sbjct: 251 KIFS 254
Score = 31.9 bits (69), Expect = 0.23
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = +2
Query: 308 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
++G D + LW + H+ + SV F + +G+ TIKLW+
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD 87
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 64.1 bits (149), Expect = 5e-11
Identities = 37/119 (31%), Positives = 59/119 (49%)
Frame = +2
Query: 113 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 292
H G VT + N K M+ S S+D +I+W + + + RL GH ++D+V
Sbjct: 105 HKGAVTALRYN-KVGSMLASGSKDNDIILWDVVGESGLF-----RLRGHRDQVTDLVFLD 158
Query: 293 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
G +S S DK LR+WDL + H +V SV + R +V+GS D+ ++ +
Sbjct: 159 GGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFY 217
Score = 51.6 bits (118), Expect = 3e-07
Identities = 24/75 (32%), Positives = 39/75 (52%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 427
LYGH + + +SSDG ++GS DK L++W L G + H V+ V F +
Sbjct: 578 LYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTH 637
Query: 428 QIVSGSRDKTIKLWN 472
+ S +D+ +K W+
Sbjct: 638 YLFSIGKDRLVKYWD 652
Score = 48.4 bits (110), Expect = 2e-06
Identities = 32/131 (24%), Positives = 63/131 (48%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 259
++LK +L GH V I + ++I++ S+DK L +W L ++G K ++ H
Sbjct: 570 DSLKFYLSLYGHKLPVMCIDISSD-GELIVTGSQDKNLKIWGL-----DFGDCHKSIFAH 623
Query: 260 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 439
+ V + +Y S D+ ++ WD + E H ++ +A S +V+
Sbjct: 624 GDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVT 683
Query: 440 GSRDKTIKLWN 472
GS D++++ W+
Sbjct: 684 GSHDRSMRRWD 694
Score = 44.4 bits (100), Expect = 4e-05
Identities = 30/132 (22%), Positives = 58/132 (43%)
Frame = +2
Query: 77 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 256
S+TL + G + VT IA++ ++ D ++ +W + G +
Sbjct: 52 SKTLTPSSSRGGPSLAVTSIASSAS--SLVAVGYADGSIRIW-----DTEKGTCEVNFNS 104
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 436
H ++ + + G+ SGS D + LWD+ R H V + F +++V
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLV 164
Query: 437 SGSRDKTIKLWN 472
S S+DK +++W+
Sbjct: 165 SSSKDKFLRVWD 176
Score = 36.7 bits (81), Expect = 0.008
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = +2
Query: 278 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 457
V +S D + D T++++ + + K H V+ + S D IV+GS+DK
Sbjct: 546 VAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKN 605
Query: 458 IKLW 469
+K+W
Sbjct: 606 LKIW 609
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 63.3 bits (147), Expect = 8e-11
Identities = 32/123 (26%), Positives = 58/123 (47%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
++GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 172 IQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIEQVRGLA 225
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
+S+ Y S DK ++ WDL K R + H V +A +++G RD +
Sbjct: 226 VSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCR 285
Query: 464 LWN 472
+W+
Sbjct: 286 VWD 288
Score = 52.0 bits (119), Expect = 2e-07
Identities = 35/128 (27%), Positives = 52/128 (40%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 259
E K+ + GH V +A +P D++L+ RD VW + + L GH
Sbjct: 248 EQNKVIRSYHGHLSGVYCLALHPTL-DVLLTGGRDSVCRVWDIRTKMQIFA-----LSGH 301
Query: 260 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 439
+ + V ++GS D T++ WDL GKT H K V ++ S
Sbjct: 302 DNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFAS 361
Query: 440 GSRDKTIK 463
S D T K
Sbjct: 362 ASADNTKK 369
Score = 51.2 bits (117), Expect = 3e-07
Identities = 38/127 (29%), Positives = 57/127 (44%)
Frame = +2
Query: 92 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 271
L+ TL GH V +A + ++ M S+ DK + W L E N I + +GH +
Sbjct: 210 LKLTLTGHIEQVRGLAVSNRHTYMF-SAGDDKQVKCWDL---EQNKVI--RSYHGHLSGV 263
Query: 272 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 451
+ L + L+G D R+WD+ H V SV + Q+V+GS D
Sbjct: 264 YCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHD 323
Query: 452 KTIKLWN 472
TIK W+
Sbjct: 324 TTIKFWD 330
Score = 34.3 bits (75), Expect = 0.043
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 350 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
A K R + H V SVAF N +GS D+TIK+W+
Sbjct: 164 APWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD 204
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 63.3 bits (147), Expect = 8e-11
Identities = 33/123 (26%), Positives = 58/123 (47%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
L+GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 166 LQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIGQVRGLA 219
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
+S+ Y S DK ++ WDL K R + H V +A +++G RD +
Sbjct: 220 VSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCR 279
Query: 464 LWN 472
+W+
Sbjct: 280 VWD 282
Score = 58.4 bits (135), Expect = 2e-09
Identities = 41/127 (32%), Positives = 61/127 (48%)
Frame = +2
Query: 92 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 271
L+ TL GH G V +A + ++ M S+ DK + W L E N I + +GH H +
Sbjct: 204 LKLTLTGHIGQVRGLAVSNRHTYMF-SAGDDKQVKCWDL---EQNKVI--RSYHGHLHGV 257
Query: 272 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 451
+ L + L+G D R+WD+ K H DV SV + Q+++GS D
Sbjct: 258 YCLALHPTLDVVLTGGRDSVCRVWDIRT-KMQIFVLPHDSDVFSVLARPTDPQVITGSHD 316
Query: 452 KTIKLWN 472
TIK W+
Sbjct: 317 STIKFWD 323
Score = 50.0 bits (114), Expect = 8e-07
Identities = 34/128 (26%), Positives = 54/128 (42%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 259
E K+ + GH V +A +P D++L+ RD VW + + +P H
Sbjct: 242 EQNKVIRSYHGHLHGVYCLALHPTL-DVVLTGGRDSVCRVWDIRTKMQIFVLP------H 294
Query: 260 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 439
+ V+ ++GS D T++ WDL GK+ +H K V ++A VS
Sbjct: 295 DSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVS 354
Query: 440 GSRDKTIK 463
S D K
Sbjct: 355 ASADNIKK 362
Score = 36.7 bits (81), Expect = 0.008
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 6/115 (5%)
Frame = +2
Query: 146 PKYPDMILSSSRDKTLIVWKLT--RDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGS 319
PK + S+ +K L+V RD NN G P K + + S+ N + +
Sbjct: 88 PKGSKELRKSATEKALVVGPTLPPRDLNNTGNPGKS----TAILPAPGSFSERNLSTAAL 143
Query: 320 WDKTLRLWDL----AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
++ W A K R + H V SVAF N +GS D+TIK+W+
Sbjct: 144 MERMPSRWPRPEWHAPWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD 198
Score = 29.1 bits (62), Expect = 1.6
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 9/136 (6%)
Frame = +2
Query: 89 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 268
K T+ H V +A +PK D + S+S D + + L + E + + L
Sbjct: 328 KSMATITNHKKTVRAMALHPKENDFV-SASADN-IKKFSLPKGEFCHNM----LSLQRDI 381
Query: 269 ISDVVLSSDGNYALSGSWDKT-LRLWDLAAGKTTRRFE--------DHTKDVLSVAFSVD 421
I+ V ++ DG G DK L WD +G +R E + + + +
Sbjct: 382 INAVAVNEDGVMVTGG--DKGGLWFWDWKSGHNFQRAETIVQPGSLESEAGIYAACYDQT 439
Query: 422 NRQIVSGSRDKTIKLW 469
++V+ DKTIK+W
Sbjct: 440 GSRLVTCEGDKTIKMW 455
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 63.3 bits (147), Expect = 8e-11
Identities = 37/124 (29%), Positives = 57/124 (45%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
T GH + ++A +P + ++S DKT +W + N G GHS + +
Sbjct: 334 TFEGHLDRLARVAFHPS-GKYLGTTSYDKTWRLWDI-----NTGAELLLQEGHSRSVYGI 387
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
DG A S D R+WDL G++ F+ H K V SV FS + + SG D
Sbjct: 388 AFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQC 447
Query: 461 KLWN 472
++W+
Sbjct: 448 RIWD 451
Score = 44.4 bits (100), Expect = 4e-05
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRL 340
+ S D +W L ++ Y IP H++ +S V +G + + S+D + +
Sbjct: 438 LASGGEDNQCRIWDLRMRKSLYIIP-----AHANLVSQVKYEPQEGYFLATASYDMKVNI 492
Query: 341 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 475
W + H V S+ + D+ I + S D+TIKLW +
Sbjct: 493 WSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTS 537
Score = 41.9 bits (94), Expect = 2e-04
Identities = 26/92 (28%), Positives = 43/92 (46%)
Frame = +2
Query: 197 VWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 376
+W++ + N + L H +DVV S + + S D+T +LW G + F
Sbjct: 281 LWEMPQVTNTIAV----LKDHKERATDVVFSPVDDCLATASADRTAKLWK-TDGTLLQTF 335
Query: 377 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
E H + VAF + + + S DKT +LW+
Sbjct: 336 EGHLDRLARVAFHPSGKYLGTTSYDKTWRLWD 367
Score = 35.9 bits (79), Expect = 0.014
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +2
Query: 251 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNR 427
+G ++ S DG + S +LW++ T +DH + V FS +
Sbjct: 252 FGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDD 311
Query: 428 QIVSGSRDKTIKLWNT 475
+ + S D+T KLW T
Sbjct: 312 CLATASADRTAKLWKT 327
Score = 32.7 bits (71), Expect = 0.13
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQ 430
GH + V S +G + SG D R+WDL K+ H V V + +
Sbjct: 421 GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYF 480
Query: 431 IVSGSRDKTIKLWN 472
+ + S D + +W+
Sbjct: 481 LATASYDMKVNIWS 494
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 60.9 bits (141), Expect = 4e-10
Identities = 37/120 (30%), Positives = 58/120 (48%)
Frame = +2
Query: 107 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 286
+GH V +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 210 KGHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLL 263
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
S G + LSGS D +RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 50.4 bits (115), Expect = 6e-07
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 433
GH + + ++ G +SG +K LR+WD G + + HT +V + R
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 434 VSGSRDKTIKLWN 472
+SGS D I+LW+
Sbjct: 271 LSGSSDSMIRLWD 283
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 392 DVLSVAFSVDNRQIVSGSRDKTIKLW 469
DVL + S D + +GSRD T+K W
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRW 67
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 60.9 bits (141), Expect = 4e-10
Identities = 37/120 (30%), Positives = 58/120 (48%)
Frame = +2
Query: 107 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 286
+GH V +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 210 KGHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLL 263
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
S G + LSGS D +RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 50.4 bits (115), Expect = 6e-07
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 433
GH + + ++ G +SG +K LR+WD G + + HT +V + R
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 434 VSGSRDKTIKLWN 472
+SGS D I+LW+
Sbjct: 271 LSGSSDSMIRLWD 283
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 392 DVLSVAFSVDNRQIVSGSRDKTIKLW 469
DVL + S D + +GSRD T+K W
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRW 67
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 59.7 bits (138), Expect = 1e-09
Identities = 30/76 (39%), Positives = 40/76 (52%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 427
L GH + ++ S S SWD T+RLWD+ A K T H DVL+VAF D +
Sbjct: 473 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 532
Query: 428 QIVSGSRDKTIKLWNT 475
Q+ S + D I W+T
Sbjct: 533 QLASSTLDGQINFWDT 548
Score = 50.0 bits (114), Expect = 8e-07
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 433
GH ++ V S D +G+ D +++W++ +G F +HT V ++ F DN +
Sbjct: 347 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 406
Query: 434 VSGSRDKTIKLWN 472
+S S D T++ W+
Sbjct: 407 LSASLDGTVRAWD 419
Score = 38.7 bits (86), Expect = 0.002
Identities = 30/133 (22%), Positives = 51/133 (38%)
Frame = +2
Query: 56 FKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 235
F+ F +T +++ L GH V + +P ++ SSS D T+ +W + +
Sbjct: 457 FEIFVWSKKTGQIKDILSGHEAPVHGLMFSP-LTQLLASSSWDYTVRLWDVFASKGTV-- 513
Query: 236 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 415
+ H+H + V DG S + D + WD G E +D+
Sbjct: 514 ---ETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGR-RDIAGGRVM 569
Query: 416 VDNRQIVSGSRDK 454
D R + S K
Sbjct: 570 TDRRSAANSSSGK 582
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 59.7 bits (138), Expect = 1e-09
Identities = 30/76 (39%), Positives = 40/76 (52%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 427
L GH + ++ S S SWD T+RLWD+ A K T H DVL+VAF D +
Sbjct: 513 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 572
Query: 428 QIVSGSRDKTIKLWNT 475
Q+ S + D I W+T
Sbjct: 573 QLASSTLDGQINFWDT 588
Score = 50.0 bits (114), Expect = 8e-07
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 433
GH ++ V S D +G+ D +++W++ +G F +HT V ++ F DN +
Sbjct: 387 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 446
Query: 434 VSGSRDKTIKLWN 472
+S S D T++ W+
Sbjct: 447 LSASLDGTVRAWD 459
Score = 38.7 bits (86), Expect = 0.002
Identities = 30/133 (22%), Positives = 51/133 (38%)
Frame = +2
Query: 56 FKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 235
F+ F +T +++ L GH V + +P ++ SSS D T+ +W + +
Sbjct: 497 FEIFVWSKKTGQIKDILSGHEAPVHGLMFSP-LTQLLASSSWDYTVRLWDVFASKGTV-- 553
Query: 236 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 415
+ H+H + V DG S + D + WD G E +D+
Sbjct: 554 ---ETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGR-RDIAGGRVM 609
Query: 416 VDNRQIVSGSRDK 454
D R + S K
Sbjct: 610 TDRRSAANSSSGK 622
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 58.8 bits (136), Expect = 2e-09
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Frame = +2
Query: 71 KMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ--K 244
K+ ET + T GH G V + +P ++ S S D T +W + + + + + K
Sbjct: 434 KIGETRPAK-TFTGHQGEVNCVKWDPT-GSLLASCSDDSTAKIWNIKQSTFVHDLREHTK 491
Query: 245 RLYGHSHFISDVVLSSDGNYAL--SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 418
+Y + ++ S S+D T++LWD GK F H + V S+AFS
Sbjct: 492 EIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSP 551
Query: 419 DNRQIVSGSRDKTIKLWN 472
+ I SGS DK+I +W+
Sbjct: 552 NGEYIASGSLDKSIHIWS 569
Score = 44.8 bits (101), Expect = 3e-05
Identities = 35/128 (27%), Positives = 59/128 (46%)
Frame = +2
Query: 89 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 268
+L TL H G + + N K D +L+ S D+T +VW + +E +++ HS
Sbjct: 356 ELISTLSKHKGPIFSLKWNKK-GDYLLTGSVDRTAVVWDVKAEE-----WKQQFEFHSGP 409
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 448
DV ++ ++A S S D + L + + + F H +V V + + S S
Sbjct: 410 TLDVDWRNNVSFATS-STDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSD 468
Query: 449 DKTIKLWN 472
D T K+WN
Sbjct: 469 DSTAKIWN 476
Score = 39.9 bits (89), Expect = 9e-04
Identities = 24/106 (22%), Positives = 47/106 (44%)
Frame = +2
Query: 143 NPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSW 322
NP + S+S D T+ +W + G GH + + S +G Y SGS
Sbjct: 507 NPNKQLTLASASFDSTVKLW-----DAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSL 561
Query: 323 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
DK++ +W + GK + + + + V ++ + +I + D ++
Sbjct: 562 DKSIHIWSIKEGKIVKTYTGN-GGIFEVCWNKEGNKIAACFADNSV 606
Score = 35.5 bits (78), Expect = 0.019
Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 12/135 (8%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE--------NNYGIPQKRLYGH 259
L GH V A +P ++ S S D T +W + N + K G
Sbjct: 261 LEGHTSEVCACAWSPS-ASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGK 319
Query: 260 SHFISDVVLSSD----GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 427
S+ S V + D G +GS D R+W L G+ H + S+ ++
Sbjct: 320 SNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLN-GELISTLSKHKGPIFSLKWNKKGD 378
Query: 428 QIVSGSRDKTIKLWN 472
+++GS D+T +W+
Sbjct: 379 YLLTGSVDRTAVVWD 393
Score = 30.3 bits (65), Expect = 0.70
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 368 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
R E HT +V + A+S + SGS D T ++W+
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWS 293
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 58.4 bits (135), Expect = 2e-09
Identities = 34/123 (27%), Positives = 61/123 (49%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
L+GH G V N + L+ +D+T+ +W R GI K H + DV
Sbjct: 14 LKGHEGAVLAARFNGD-GNYALTCGKDRTIRLWNPHR-----GILIKTYKSHGREVRDVH 67
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
++SD S D+ + WD++ G+ R+F H +V +V F+ + +VS D++++
Sbjct: 68 VTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLR 127
Query: 464 LWN 472
+W+
Sbjct: 128 VWD 130
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN--RQIVSG 442
++ + +S+DGN L+G D TLRL D G+ + ++ H + N ++ G
Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGG 246
Query: 443 SRDKTIKLWN 472
S D + W+
Sbjct: 247 SEDGLVFFWD 256
Score = 30.7 bits (66), Expect = 0.53
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 89 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 205
K+ R H+ VT ++ +PK D +L+SS D T+ VWK
Sbjct: 261 KVLSKFRAHDLVVTSVSYHPK-EDCMLTSSVDGTIRVWK 298
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 359 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
K + H VL+ F+ D ++ +D+TI+LWN
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWN 46
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 58.4 bits (135), Expect = 2e-09
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Frame = +2
Query: 110 GHNGW-VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 286
GH GW V + +P +++S +D+ + +W TR G L+GH + + V
Sbjct: 266 GH-GWDVKSVDWHPT-KSLLVSGGKDQLVKLWD-TRS----GRELCSLHGHKNIVLSVKW 318
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIK 463
+ +GN+ L+ S D+ ++L+D+ K + F HTKDV S+A+ + + VSGS D +I
Sbjct: 319 NQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSIC 378
Query: 464 LW 469
W
Sbjct: 379 HW 380
Score = 41.5 bits (93), Expect = 3e-04
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 433
GH + V + +SG D+ ++LWD +G+ H VLSV ++ + +
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWL 325
Query: 434 VSGSRDKTIKLWN 472
++ S+D+ IKL++
Sbjct: 326 LTASKDQIIKLYD 338
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +2
Query: 83 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 262
T+K + RGH VT +A +P + + +S S D ++ W + + IP H
Sbjct: 341 TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPN----AHD 396
Query: 263 HFISDVVLSSDGNYALSGSWDKTLRLW 343
+ + D+ G SGS D T + W
Sbjct: 397 NSVWDLAWHPIGYLLCSGSNDHTTKFW 423
Score = 37.9 bits (84), Expect = 0.003
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 427
L H I +V S + NY +SG TL+ W H + + ++F +
Sbjct: 161 LQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDL 220
Query: 428 QIVSGSRDKTIKLWN 472
+ S S D T+K+W+
Sbjct: 221 KFCSCSDDTTVKVWD 235
Score = 30.3 bits (65), Expect = 0.70
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +2
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 448
I+ V+ + G ++GS LW+ + + H + + S+ +S + +VSG
Sbjct: 126 INRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDD 185
Query: 449 DKTIKLW 469
T+K W
Sbjct: 186 GGTLKYW 192
Score = 29.9 bits (64), Expect = 0.92
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 383 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 475
H DV SV + +VSG +D+ +KLW+T
Sbjct: 267 HGWDVKSVDWHPTKSLLVSGGKDQLVKLWDT 297
Score = 27.1 bits (57), Expect = 6.5
Identities = 26/125 (20%), Positives = 52/125 (41%), Gaps = 2/125 (1%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
+L GH V + N + +L++S+D+ + ++ + + + GH+ ++ +
Sbjct: 305 SLHGHKNIVLSVKWNQN-GNWLLTASKDQIIKLYDIRTMKE-----LQSFRGHTKDVTSL 358
Query: 281 VLSS-DGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFSVDNRQIVSGSRDK 454
Y +SGS D ++ W + + H V +A+ + SGS D
Sbjct: 359 AWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDH 418
Query: 455 TIKLW 469
T K W
Sbjct: 419 TTKFW 423
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 58.4 bits (135), Expect = 2e-09
Identities = 32/102 (31%), Positives = 55/102 (53%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
L+ HNG + + +P + +SS DKT+ +W + + + + +K L GH ++ D V
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASS-DKTVKIWNV----DGFKL-EKVLTGHQRWVWDCV 260
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 409
S DG + ++ S D T RLW + AGK + ++ H K + A
Sbjct: 261 FSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVCCA 302
Score = 58.0 bits (134), Expect = 3e-09
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGI--PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 334
M+++++ T VW+L R + P +L H+ I +LS Y + S DKT+
Sbjct: 176 MVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTV 235
Query: 335 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
++W++ K + H + V FSVD +V+ S D T +LW+
Sbjct: 236 KIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWS 281
Score = 44.8 bits (101), Expect = 3e-05
Identities = 31/109 (28%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Frame = +2
Query: 155 PDMILSS-SRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKT 331
P +IL++ S D T+ W+ Y Q Y SH ++ + ++ D +Y L+ + +
Sbjct: 4 PSVILATASYDHTIRFWE-AETGRCYRTIQ---YPDSH-VNRLEITPDKHY-LAAACNPH 57
Query: 332 LRLWDLAAG--KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+RL+D+ + + ++ HT +V++V F D + + SGS D T+K+W+
Sbjct: 58 IRLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWD 106
Score = 40.7 bits (91), Expect = 5e-04
Identities = 19/72 (26%), Positives = 38/72 (52%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 436
H++ + V D + SGS D T+++WDL A + +E V +V + +++
Sbjct: 77 HTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYES-VAAVNTVVLHPNQTELI 135
Query: 437 SGSRDKTIKLWN 472
SG ++ I++W+
Sbjct: 136 SGDQNGNIRVWD 147
Score = 28.3 bits (60), Expect = 2.8
Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Frame = +2
Query: 170 SSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 349
S S D T+ +W L G ++ Y ++ VVL + +SG + +R+WDL
Sbjct: 95 SGSEDGTVKIWDLRAP----GCQKE--YESVAAVNTVVLHPNQTELISGDQNGNIRVWDL 148
Query: 350 AAGKTTRRFEDHTKD-VLSVAFSVDNRQIVSGSRDKTIKLW 469
A + V S+ D +V+ + T +W
Sbjct: 149 RANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVW 189
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 57.6 bits (133), Expect = 4e-09
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Frame = +2
Query: 122 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKR-LYGHSHFISDVVLSSDG 298
W Q + N KY + SSS+D+T I+W+++ D + I K L GH + ++ S D
Sbjct: 278 WFLQFSHNGKY---LASSSKDQTAIIWEISADGH---ISLKHTLVGHHKPVIAILWSPDD 331
Query: 299 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
L+ ++ +R WD+ +G +E +S + D + I++G D++I +W+
Sbjct: 332 RQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWD 389
Score = 43.6 bits (98), Expect = 7e-05
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Frame = +2
Query: 152 YPDM--ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWD 325
YPD I++ D+++ +W L E Q+ + +SD+ ++ DG + +S D
Sbjct: 370 YPDGQGIIAGMTDRSICMWDLDGREKECWKGQR-----TQKVSDIAMTDDGKWLVSVCKD 424
Query: 326 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+ L+D A T R + + S + S DN+ I+ ++ I+LWN
Sbjct: 425 SVISLFDREA--TVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWN 471
Score = 40.3 bits (90), Expect = 7e-04
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG---KTTRRFEDHTKDVLSVAFSV 418
L H+ + + S +G Y S S D+T +W+++A H K V+++ +S
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSP 329
Query: 419 DNRQIVSGSRDKTIKLWN 472
D+RQ+++ ++ I+ W+
Sbjct: 330 DDRQVLTCGAEEVIRRWD 347
Score = 33.5 bits (73), Expect = 0.075
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 302 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKLW 469
+ SGS D + +W + GK H V V++S N + S S D TI++W
Sbjct: 503 FIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Score = 30.7 bits (66), Expect = 0.53
Identities = 24/73 (32%), Positives = 36/73 (49%)
Frame = +2
Query: 83 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 262
T KL L GH G V ++ +P M+ S+S D T+ +W L R N +K + G S
Sbjct: 520 TGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR-INQQNQKKKLVQGSS 578
Query: 263 HFISDVVLSSDGN 301
+ V+ +GN
Sbjct: 579 S--NGVIHRCNGN 589
Score = 30.3 bits (65), Expect = 0.70
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 359 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
+T + E HT +V + FS + + + S S+D+T +W
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIW 301
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 56.4 bits (130), Expect = 9e-09
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Frame = +2
Query: 89 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 268
+L T GH V+ I PK ++LS+ D + +W D N G + GH+
Sbjct: 273 RLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIW----DVYNSGKCMRTYMGHAKA 328
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ--IVSG 442
+ D+ S+DG+ L+ +DK ++ WD G+ F + D++Q +++G
Sbjct: 329 VRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAG 388
Query: 443 SRDKTIKLWN 472
DK I W+
Sbjct: 389 MSDKKIVQWD 398
Score = 48.4 bits (110), Expect = 2e-06
Identities = 19/57 (33%), Positives = 35/57 (61%)
Frame = +2
Query: 299 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
N L+G DK + WD+ G+ T+ ++ H V ++ F +NR+ V+ S DK++++W
Sbjct: 383 NILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 439
Score = 48.0 bits (109), Expect = 3e-06
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 254 GHSHFISDV-VLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNR 427
GH+ +S + G+ LS D +++WD+ +GK R + H K V + FS D
Sbjct: 280 GHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGS 339
Query: 428 QIVSGSRDKTIKLWNT 475
+ ++ DK IK W+T
Sbjct: 340 KFLTAGYDKNIKYWDT 355
Score = 32.7 bits (71), Expect = 0.13
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Frame = +2
Query: 113 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH--SHFISDVVL 286
H + I+ +P + + + S D ++++ TR+ +KR GH + + V
Sbjct: 454 HMHSMPSISVHPN-GNWLAAQSLDNQILIYS-TRERFQLN-KKKRFAGHIVAGYACQVNF 510
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIK 463
S DG + +SG + WD + K R + H + + ++ ++ + D IK
Sbjct: 511 SPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIK 570
Query: 464 LWN 472
W+
Sbjct: 571 YWD 573
Score = 31.9 bits (69), Expect = 0.23
Identities = 21/119 (17%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
Frame = +2
Query: 122 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGN 301
+V ++ + +++L+ DK ++ W + E Q H ++ + +
Sbjct: 371 YVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQ-----HLGAVNTITFVDNNR 425
Query: 302 YALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 475
++ S DK+LR+W+ + E H + S++ + + + S D I +++T
Sbjct: 426 RFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYST 484
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 55.6 bits (128), Expect = 2e-08
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Frame = +2
Query: 89 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 268
++ TL GH+ VT + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK--DVLSVAFSVDNRQIVSG 442
+ V + Y +S S D T +DL++G + D +K D + AF D + +G
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTG 371
Query: 443 SRDKTIKLWN 472
+ +K+W+
Sbjct: 372 TSQSVVKIWD 381
Score = 40.3 bits (90), Expect = 7e-04
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = +2
Query: 275 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 454
D++ S D +G D T L+D +G+ H+K V SV F D+ +++ S DK
Sbjct: 229 DILHSKD--VIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADK 286
Query: 455 TIKLW 469
T+++W
Sbjct: 287 TVRIW 291
Score = 36.7 bits (81), Expect = 0.008
Identities = 14/60 (23%), Positives = 35/60 (58%)
Frame = +2
Query: 293 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
DG +G+ +++WD+ + +F+ HT +V +++FS +N ++ + + ++LW+
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 55.6 bits (128), Expect = 2e-08
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Frame = +2
Query: 89 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 268
++ TL GH+ VT + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK--DVLSVAFSVDNRQIVSG 442
+ V + Y +S S D T +DL++G + D +K D + AF D + +G
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTG 371
Query: 443 SRDKTIKLWN 472
+ +K+W+
Sbjct: 372 TSQSVVKIWD 381
Score = 40.3 bits (90), Expect = 7e-04
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = +2
Query: 275 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 454
D++ S D +G D T L+D +G+ H+K V SV F D+ +++ S DK
Sbjct: 229 DILHSKD--VIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADK 286
Query: 455 TIKLW 469
T+++W
Sbjct: 287 TVRIW 291
Score = 36.7 bits (81), Expect = 0.008
Identities = 14/60 (23%), Positives = 35/60 (58%)
Frame = +2
Query: 293 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
DG +G+ +++WD+ + +F+ HT +V +++FS +N ++ + + ++LW+
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 55.2 bits (127), Expect = 2e-08
Identities = 36/129 (27%), Positives = 62/129 (48%)
Frame = +2
Query: 89 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 268
++R TL GH V + + ++S++ D+T+ +W L + G + S+
Sbjct: 306 RVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHK-----GYCTNTVLFTSN- 359
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 448
+ + LS DG SG D LRLWD+ GK H+ V SV+ S + +I++ R
Sbjct: 360 CNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGR 419
Query: 449 DKTIKLWNT 475
D +++T
Sbjct: 420 DNVHNVFDT 428
Score = 54.0 bits (124), Expect = 5e-08
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 343
+ + +D+ + +W + N G K LYG I D+ ++ D ++ + L +W
Sbjct: 246 LFTGGQDRAVKMW-----DTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVW 300
Query: 344 DLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 472
D+++G+ HT V +V S +R +VS + D+TIKLW+
Sbjct: 301 DVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWD 344
Score = 39.1 bits (87), Expect = 0.002
Identities = 13/76 (17%), Positives = 36/76 (47%)
Frame = +2
Query: 245 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 424
R++ H +V + +G D+ +++WD +G + ++L +A + DN
Sbjct: 226 RIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDN 285
Query: 425 RQIVSGSRDKTIKLWN 472
+ +++ + + +W+
Sbjct: 286 KSVIAATSSNNLFVWD 301
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 54.8 bits (126), Expect = 3e-08
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIP--QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 337
+ S DK +W ++G+ + R HS + +SSDG Y +G D+ +
Sbjct: 190 VSSGKTDK--YIWPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLATGGVDRHVH 247
Query: 338 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+WD+ + + F H V + F ++ SGS D+T+K+WN
Sbjct: 248 IWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWN 292
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 19/91 (20%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-------------------RFE 379
H + V LS D + S S D T+ WD+++GKT + R +
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPRNK 219
Query: 380 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+H+++ L++A S D R + +G D+ + +W+
Sbjct: 220 NHSRESLALAVSSDGRYLATGGVDRHVHIWD 250
Score = 31.5 bits (68), Expect = 0.30
Identities = 20/93 (21%), Positives = 43/93 (46%)
Frame = +2
Query: 182 DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 361
D+ + +W + E+ P GH + +S + + SGS+D+T+++W++
Sbjct: 243 DRHVHIWDVRTREHVQAFP-----GHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKA 297
Query: 362 TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
H ++L++ R + G RD+T+
Sbjct: 298 FITENHGHQGEILAIDALRKERALTVG-RDRTM 329
Score = 27.1 bits (57), Expect = 6.5
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENN-YGIPQKRLYGHSHFISDVVL 286
GH G + I K + L+ RD+T++ K+ Y P L FISD
Sbjct: 304 GHQGEILAIDALRK--ERALTVGRDRTMLYHKVPESTRMIYRAPASSLESCC-FISD--- 357
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 397
N LSGS + T+ LW + K F++ +D+
Sbjct: 358 ----NEYLSGSDNGTVALWGMLKKKPVFVFKNAHQDI 390
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 54.0 bits (124), Expect = 5e-08
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +2
Query: 161 MILSSSRDKTLIVWK--LTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 334
M+++++ T VW+ R P +L H+ I +LS Y + S DKT+
Sbjct: 182 MVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTV 241
Query: 335 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
++W+L K + H + V FS+D +V+ S D T +LW+
Sbjct: 242 KIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWS 287
Score = 54.0 bits (124), Expect = 5e-08
Identities = 31/96 (32%), Positives = 50/96 (52%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
L+ HN + + +P + +SS DKT+ +W L + + + +K L GH ++ D
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASS-DKTVKIWNL----DGFKL-EKVLTGHERWVWDCD 266
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 391
S DG Y ++ S D T RLW + AGK ++ H K
Sbjct: 267 FSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRK 302
Score = 41.9 bits (94), Expect = 2e-04
Identities = 21/83 (25%), Positives = 40/83 (48%)
Frame = +2
Query: 224 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 403
N IP + H+ + V G+ SGS D ++++WDL + R F V +
Sbjct: 72 NPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRS-VSPVNT 130
Query: 404 VAFSVDNRQIVSGSRDKTIKLWN 472
V + +++SG ++ I++W+
Sbjct: 131 VVLHPNQTELISGDQNGNIRVWD 153
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Frame = +2
Query: 155 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 334
P + ++S D+T+ +W+ + L+ ++ + L+ + L + + +
Sbjct: 10 PVYLATASHDQTIRLWQARTGRCYFSFRYPDLH-----VNRLELTPEKG-KLVAACNPHI 63
Query: 335 RLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
RL+DL + R F HTK+V++V F + SGS D ++K+W+
Sbjct: 64 RLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWD 112
Score = 26.6 bits (56), Expect = 8.6
Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 340
M+ S S D ++ +W L E +R + ++ VVL + +SG + +R+
Sbjct: 98 MMYSGSEDGSVKIWDLRVREC------QREFRSVSPVNTVVLHPNQTELISGDQNGNIRV 151
Query: 341 WDLAAGKTTRRFEDHT-KDVLSVAFSVDNRQIVSGSRDKTIKLWNT 475
WDL A + + S+ D +V+ + T +W +
Sbjct: 152 WDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAANDRGTCYVWRS 197
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 53.2 bits (122), Expect = 9e-08
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Frame = +2
Query: 89 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 268
++ TL GH+ VT I D++L++S DKT+ +W + D NY + L HS
Sbjct: 255 QILSTLTGHSKKVTSIKFVGD-TDLVLTASSDKTVRIWGCSED-GNY-TSRHTLKDHSAE 311
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK-DV--LSVAFSVDNRQIVS 439
+ V + + Y +S S D T +DL++G + D ++ DV + AF D + +
Sbjct: 312 VRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGT 371
Query: 440 GSRDKTIKLWN 472
G+ +K+W+
Sbjct: 372 GTAQSIVKIWD 382
Score = 40.7 bits (91), Expect = 5e-04
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +2
Query: 266 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 445
F D++ S D +G D T L+D +G+ H+K V S+ F D +++ S
Sbjct: 226 FSMDILHSKD--VIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTAS 283
Query: 446 RDKTIKLW 469
DKT+++W
Sbjct: 284 SDKTVRIW 291
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 52.8 bits (121), Expect = 1e-07
Identities = 21/68 (30%), Positives = 41/68 (60%)
Frame = +2
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 448
I + +++G Y + G + LW++A GK +++ H + V + FS D+ +VSGS+
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 449 DKTIKLWN 472
D +I++W+
Sbjct: 141 DGSIRVWS 148
Score = 44.0 bits (99), Expect = 5e-05
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Frame = +2
Query: 242 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL---------AAGKT--TRRFEDHT 388
K+ +GH ++ +V S D + +SGS D ++R+W L G T F +HT
Sbjct: 114 KKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHT 173
Query: 389 KDVLSVAFSVD--NRQIVSGSRDKTIKLWN 472
V + N I+S S D+T K+W+
Sbjct: 174 MSVTDIVIDYGGCNAVIISSSEDRTCKVWS 203
Score = 31.1 bits (67), Expect = 0.40
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 340
+I+SSS D+T VW L+R G K + S I+ + L G +G+ D + +
Sbjct: 189 VIISSSEDRTCKVWSLSR-----GKLLKNIIFPS-VINALALDPGGCVFYAGARDSKIYI 242
Query: 341 WDLAA-----GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+ A + + K + +A+ D ++SGS D + +W+
Sbjct: 243 GAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWD 291
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 52.4 bits (120), Expect = 2e-07
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Frame = +2
Query: 227 YGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 397
+ I +K LY GH+ + D+ S D NY LS S DKT+RLW + + F H V
Sbjct: 314 FRIMEKPLYEFRGHTGEVLDISWSKD-NYLLSASMDKTVRLWKVGSNDCLGVFA-HNSYV 371
Query: 398 LSVAFS-VDNRQIVSGSRDKTIKLWN 472
SV F+ V+ +SGS D +++WN
Sbjct: 372 TSVQFNPVNENYFMSGSIDGKVRIWN 397
Score = 46.8 bits (106), Expect = 7e-06
Identities = 35/124 (28%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Frame = +2
Query: 107 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 286
RGH G V I+ + + +LS+S DKT+ +WK+ ++ G+ + H+ +++ V
Sbjct: 325 RGHTGEVLDISWSKD--NYLLSASMDKTVRLWKVGSNDC-LGV-----FAHNSYVTSVQF 376
Query: 287 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS-VAFSVDNRQIVSGSRDKTI 460
+ + NY +SGS D +R+W++ +G + + D KD++S V + D + + GS + +
Sbjct: 377 NPVNENYFMSGSIDGKVRIWNI-SGCSVVDWAD-LKDIISAVCYRPDGQGGIIGSLNGSC 434
Query: 461 KLWN 472
+ +N
Sbjct: 435 RFFN 438
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 52.4 bits (120), Expect = 2e-07
Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Frame = +2
Query: 107 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 286
RGH G + ++ + K +LSSS D+T+ +W++ + R++ H F++ V
Sbjct: 360 RGHTGEILDLSWSEK--GFLLSSSVDETVRLWRVGSSDECI-----RVFSHKSFVTCVAF 412
Query: 287 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
+ D NY +SGS D +R+WD++ + + D + V ++ + D + V GS +
Sbjct: 413 NPVDDNYFISGSIDGKVRIWDVSQFRVV-DYTDIRQIVTALCYRPDGKGAVVGSMTGECR 471
Query: 464 LWNT 475
++T
Sbjct: 472 FYHT 475
Score = 51.2 bits (117), Expect = 3e-07
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 236 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 415
PQ GH+ I D+ S G + LS S D+T+RLW + + R H V VAF+
Sbjct: 355 PQHEFRGHTGEILDLSWSEKG-FLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFN 413
Query: 416 -VDNRQIVSGSRDKTIKLWN 472
VD+ +SGS D +++W+
Sbjct: 414 PVDDNYFISGSIDGKVRIWD 433
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 52.4 bits (120), Expect = 2e-07
Identities = 27/117 (23%), Positives = 55/117 (47%)
Frame = +2
Query: 125 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 304
++ ++ +P+ D+++++S D + W+++R + K H + DG
Sbjct: 28 ISSLSFSPR-ADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTT 86
Query: 305 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 475
SG DK ++W L +G H + ++A+ + +GS DKT+K W+T
Sbjct: 87 VFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDT 143
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 52.0 bits (119), Expect = 2e-07
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Frame = +2
Query: 116 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV-LS- 289
NG ++ +PK S SR K++ + + E +G+ +K + + DV+ LS
Sbjct: 419 NGSPEPVSMSPKRRGRT-SFSR-KSVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLSW 476
Query: 290 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 466
S + LS S DKT+RLWDL++ KT + H+ V + F+ VD+ +SGS D +++
Sbjct: 477 SKSQHLLSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRI 535
Query: 467 WN 472
W+
Sbjct: 536 WS 537
Score = 44.0 bits (99), Expect = 5e-05
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRL 340
+LSSS DKT+ +W L+ +++ HS +++ + + D NY +SGS D +R+
Sbjct: 482 LLSSSMDKTVRLWDLSSKTC------LKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRI 535
Query: 341 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 475
W + + + D + V + ++ D + + GS T L+NT
Sbjct: 536 WSIPDHQVV-DWNDLHEMVTAACYTPDGQGALVGSYKGTCCLYNT 579
Score = 29.1 bits (62), Expect = 1.6
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = +2
Query: 113 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 292
H+ +VT I NP + +S S D + +W + ++ + L+ ++ +
Sbjct: 507 HSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIP---DHQVVDWNDLH---EMVTAACYTP 560
Query: 293 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 394
DG AL GS+ T L++ K +R E + K+
Sbjct: 561 DGQGALVGSYKGTCCLYNTHDNKLQQRREINLKN 594
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 52.0 bits (119), Expect = 2e-07
Identities = 36/149 (24%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Frame = +2
Query: 53 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG 232
+++ F+ SE++ + LRGH V ++ N ++ + RDK++ +W++ +E++
Sbjct: 74 VWENFATDSESVSV---LRGHESEVKSVSWNAS-GSLLATCGRDKSVWIWEIQPEEDDEF 129
Query: 233 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW-------DLAAGKTTRRFED-HT 388
L GHS + V+ + S S+D T+++W D +T + H+
Sbjct: 130 DTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHS 189
Query: 389 KDVLSVAFSVDNRQIVSGSRDKTIKLWNT 475
V S++F+ ++V+ S D +K+W T
Sbjct: 190 STVWSISFNAAGDKMVTCSDDLAVKIWKT 218
Score = 37.1 bits (82), Expect = 0.006
Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 29/151 (19%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK---LTR-------------DEN---- 223
L GH V +A NP +I S S DKT+ +W+ LTR D N
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHRLGSFDGNTCVW 75
Query: 224 -NYGIPQKR---LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK-----TTRRF 376
N+ + L GH + V ++ G+ + DK++ +W++ + T
Sbjct: 76 ENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVL 135
Query: 377 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
H++DV V + + S S D TIK+W
Sbjct: 136 TGHSEDVKMVLWHPTMDVLFSCSYDNTIKIW 166
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 368 RRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLW 469
++ E HT V +VA++ + I S S DKT+++W
Sbjct: 14 QKLEGHTDRVWNVAWNPAADGVIASCSADKTVRIW 48
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 51.6 bits (118), Expect = 3e-07
Identities = 32/118 (27%), Positives = 62/118 (52%)
Frame = +2
Query: 116 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD 295
+G V Q+ + D++ + ++D +++ W+ N + P L GH+ ++ V L
Sbjct: 227 SGPVGQVYSLVVGTDLLFAGTQDGSILAWRYNAATNCFE-PSASLTGHT--LAVVTLYVG 283
Query: 296 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
N SGS DKT+++W L + + DH+ V+S+ ++ ++S S D T+K+W
Sbjct: 284 ANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLI--CWDQFLLSCSLDNTVKIW 339
Score = 39.9 bits (89), Expect = 9e-04
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +2
Query: 245 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 367
+L GH +S + L S + +GS D+TLR+WD A+G+ T
Sbjct: 146 QLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCT 186
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 202
E+ L L GH V+ IA P D + + S+D+TL VW
Sbjct: 139 ESFALLTQLDGHEKLVSGIAL-PSGSDKLYTGSKDETLRVW 178
Score = 27.5 bits (58), Expect = 4.9
Identities = 9/34 (26%), Positives = 22/34 (64%)
Frame = +2
Query: 371 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+ + H K V +A + ++ +GS+D+T+++W+
Sbjct: 146 QLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWD 179
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 404 VAFSVDNRQIVSGSRDKTIKLWN 472
V V ++ SGS DKTIK+W+
Sbjct: 278 VTLYVGANRLYSGSMDKTIKVWS 300
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 51.6 bits (118), Expect = 3e-07
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 436
H +S + LS DG S SWD+TL++W K F + D ++ +N I
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIY 223
Query: 437 SGSRDKTIKLW 469
+GS D+ IK+W
Sbjct: 224 TGSSDQRIKVW 234
Score = 42.7 bits (96), Expect = 1e-04
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
L HN + +A + ++ S D +++VW+ RD+ + L GH+ + +
Sbjct: 255 LSEHNSGINALALSGTNGSLLHSGGSDGSILVWE--RDDGGDIVVVGMLRGHTESVLCLA 312
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAG--KTTRRFEDHTKDV--LSVAFSVDNRQ------- 430
+ SD SGS DKT+RLW +A E H V L+ AF D+R+
Sbjct: 313 VVSD--ILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFR-DSRKADEASYH 369
Query: 431 IVSGSRDKTIKLW 469
I SG D +K+W
Sbjct: 370 IYSGGLDSQVKVW 382
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 383 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 475
H V +A S D + S S D+T+K+W T
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRT 194
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 51.6 bits (118), Expect = 3e-07
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Frame = +2
Query: 89 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 268
KL L GHN V + +P P ++ S S D + + + G + GH+ +
Sbjct: 191 KLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHD-AEGKTLLG----SMSGHTSW 245
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF------SVDNRQ 430
+ V S DG +GS D+T+RLWDL + +H V SVAF V +
Sbjct: 246 VLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAGR 305
Query: 431 IVSGSRDKTIKLWN 472
+ S S DK++ L++
Sbjct: 306 LASVSDDKSVSLYD 319
Score = 37.9 bits (84), Expect = 0.003
Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Frame = +2
Query: 128 TQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA 307
T + P ++L+ S D+T+ +W+ DE + + GHS ++ + G A
Sbjct: 21 TWVPATEDRPALLLTGSLDETVKLWR--PDELDL---VRTNTGHSLGVAALAAHPSGIIA 75
Query: 308 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNT 475
S S D +R++D+ T E +V + F + V+G ++KLW+T
Sbjct: 76 ASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDT 132
Score = 30.3 bits (65), Expect = 0.70
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 77 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 208
+E L G++ GH WV + +P I + S D+T+ +W L
Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASPD-GGAIATGSSDRTVRLWDL 272
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 51.2 bits (117), Expect = 3e-07
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 3/141 (2%)
Frame = +2
Query: 59 KPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 238
KP S + + ++ LRGH V A + +++ S D+ + VW + + Y +
Sbjct: 227 KPSSMVQKMQNIK-RLRGHRNAV-YCAILDRSGRYVITGSDDRLVKVWSM---DTAYCLA 281
Query: 239 QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 418
R GH I+D+ +SS+ + S S D +R+W L G HT V ++AFS
Sbjct: 282 SCR--GHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSP 339
Query: 419 ---DNRQIVSGSRDKTIKLWN 472
Q++S S D T ++W+
Sbjct: 340 RPGSPYQLLSSSDDGTCRIWD 360
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 51.2 bits (117), Expect = 3e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +2
Query: 308 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 40.7 bits (91), Expect = 5e-04
Identities = 31/111 (27%), Positives = 56/111 (50%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 436
+S D + ++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 433
GH ++ + + +G+ S + D T LW G+ + H V S D+ ++
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 434 VSGSRDKTIKLWN 472
++GS D+T KLW+
Sbjct: 68 ITGSADQTAKLWD 80
Score = 36.3 bits (80), Expect = 0.011
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 340
I+S DK + +W E + Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 341 WDL 349
WD+
Sbjct: 220 WDM 222
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 51.2 bits (117), Expect = 3e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +2
Query: 308 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 40.7 bits (91), Expect = 5e-04
Identities = 31/111 (27%), Positives = 56/111 (50%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 436
+S D + ++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 433
GH ++ + + +G+ S + D T LW G+ + H V S D+ ++
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 434 VSGSRDKTIKLWN 472
++GS D+T KLW+
Sbjct: 68 ITGSADQTAKLWD 80
Score = 36.7 bits (81), Expect = 0.008
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 340
I+S DK + +W E + Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 341 WDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSGSRD 451
WD+ +T + +T V A S+ N ++ G +D
Sbjct: 220 WDM---RTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQD 256
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 51.2 bits (117), Expect = 3e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +2
Query: 308 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 40.7 bits (91), Expect = 5e-04
Identities = 31/111 (27%), Positives = 56/111 (50%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 436
+S D + ++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 433
GH ++ + + +G+ S + D T LW G+ + H V S D+ ++
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 434 VSGSRDKTIKLWN 472
++GS D+T KLW+
Sbjct: 68 ITGSADQTAKLWD 80
Score = 36.7 bits (81), Expect = 0.008
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 340
I+S DK + +W E + Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 341 WDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSGSRD 451
WD+ +T + +T V A S+ N ++ G +D
Sbjct: 220 WDM---RTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQD 256
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 51.2 bits (117), Expect = 3e-07
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Frame = +2
Query: 107 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF-ISDVV 283
+GH +T +P+ + +L+SS D +L +W + + + + +L ++
Sbjct: 275 KGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCA 334
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRF----EDHTKDVLSVAFSVDNRQIVSGSRD 451
DG G D ++++W L G +R + HT D+ SV FS D R ++S S D
Sbjct: 335 WDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFD 394
Query: 452 KTIKLWN 472
++K+W+
Sbjct: 395 GSLKVWD 401
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = +2
Query: 215 DENNYGIP---QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 346
+EN Y IP + +L GH+ +S + + S G LSGS+D T+R++D
Sbjct: 159 EENRYQIPLSNEIQLKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYD 205
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FE--DHTKDVLSVAFSVDNR 427
H+ I+ V SSDG LS S+D +L++WDL K + FE + +VAFS D +
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQ 431
Query: 428 QIVSGS 445
I++G+
Sbjct: 432 IILTGT 437
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 371 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+ + HTK V S+A +++SGS D T+++++
Sbjct: 172 QLKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYD 205
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 50.8 bits (116), Expect = 5e-07
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQ 430
G+S I V S+DG ++GS D ++ ++DL A + + R HT DV +V F+ ++
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 431 IVSGSRDKTIKLWN 472
I+SGS D K+W+
Sbjct: 287 ILSGSDDNLCKVWD 300
Score = 42.7 bits (96), Expect = 1e-04
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD-GNYALSGSWDKTLRL 340
+++ S D ++ V+ L + N + R H+ ++ V + + GN LSGS D ++
Sbjct: 244 VVAGSSDDSIYVYDL--EANRVSL---RTVAHTSDVNTVCFADESGNLILSGSDDNLCKV 298
Query: 341 WD----LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
WD + K H + V + D R +S +D+TIKLW+
Sbjct: 299 WDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWD 346
Score = 37.1 bits (82), Expect = 0.006
Identities = 23/79 (29%), Positives = 35/79 (44%)
Frame = +2
Query: 113 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 292
H V + + ++ILS S D VW R P L GH ++ +
Sbjct: 270 HTSDVNTVCFADESGNLILSGSDDNLCKVWD-RRCFIGRDKPAGVLVGHLEGVTFIDSRG 328
Query: 293 DGNYALSGSWDKTLRLWDL 349
DG Y +S D+T++LWD+
Sbjct: 329 DGRYFISNGKDQTIKLWDI 347
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 50.8 bits (116), Expect = 5e-07
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 436
H +S + L+ D SGSWDKTL++W L+ K E H V +V D+ +
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDD-LVF 302
Query: 437 SGSRDKTIKLW 469
+GS D T+K+W
Sbjct: 303 TGSADGTLKVW 313
Score = 34.3 bits (75), Expect = 0.043
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 340
++ S S DKTL VW+L+ + + + H ++ VV D + +GS D TL++
Sbjct: 259 LLYSGSWDKTLKVWRLSDSK-----CLESIEAHDDAVNTVVSGFD-DLVFTGSADGTLKV 312
Query: 341 WDL-AAGKTTRR-----FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
W GK + V ++A ++ + + GS D T+ W
Sbjct: 313 WKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFW 361
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 50.4 bits (115), Expect = 6e-07
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Frame = +2
Query: 71 KMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP-QKR 247
K ++ + +L H V I +P +++ S + L +WKL E N K
Sbjct: 49 KKVPSVSYQSSLTYHGCAVNTIRFSPS-GELLASGADGGELFIWKLHPSETNQSWKVHKS 107
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 427
L H + D+ S D Y +SGS D + +WD+ G + + H V VA+ +
Sbjct: 108 LSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAK 167
Query: 428 QIVSGSRDKTIKLW 469
+ S S D+T +++
Sbjct: 168 YVASLSSDRTCRIY 181
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIP----QKRLYGHSHFISDVVLSSDGNYALSGSWDK 328
++ ++ D + +W + + +P Q L H ++ + S G SG+
Sbjct: 27 LLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGG 86
Query: 329 TLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
L +W L +T + ++ H KDVL + +S D+ ++SGS D + +W+
Sbjct: 87 ELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWD 140
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 50.4 bits (115), Expect = 6e-07
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Frame = +2
Query: 71 KMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP-QKR 247
K ++ + +L H V I +P +++ S + L +WKL E N K
Sbjct: 49 KKVPSVSYQSSLTYHGCAVNTIRFSPS-GELLASGADGGELFIWKLHPSETNQSWKVHKS 107
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 427
L H + D+ S D Y +SGS D + +WD+ G + + H V VA+ +
Sbjct: 108 LSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAK 167
Query: 428 QIVSGSRDKTIKLW 469
+ S S D+T +++
Sbjct: 168 YVASLSSDRTCRIY 181
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIP----QKRLYGHSHFISDVVLSSDGNYALSGSWDK 328
++ ++ D + +W + + +P Q L H ++ + S G SG+
Sbjct: 27 LLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGG 86
Query: 329 TLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
L +W L +T + ++ H KDVL + +S D+ ++SGS D + +W+
Sbjct: 87 ELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWD 140
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 50.4 bits (115), Expect = 6e-07
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Frame = +2
Query: 86 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 265
L+ + +++ H+ V IA + + + S D+ + VW E + + L H
Sbjct: 225 LRCKESIKAHDDAVNAIAVSTN--GTVYTGSADRRIRVWAKPTGEKRHTLVAT-LEKHKS 281
Query: 266 FISDVVLSSDGNYALSGSWDKTLRLW---DLAAGKTTR-RFEDHTKDVLSVAFSVDNRQI 433
++ + L+ DG+ SGS D+++ +W D + R H K +LS+ F+V + +
Sbjct: 282 AVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL-FNVSD-LL 339
Query: 434 VSGSRDKTIKLW 469
+SGS D+T+++W
Sbjct: 340 LSGSADRTVRIW 351
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 239 QKRLY-GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 415
+KRL+ H+ ++ + +S DG + S SWDKTL++W + + + H V ++A S
Sbjct: 187 KKRLWIEHADAVTALAVS-DG-FIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVS 244
Query: 416 VDNRQIVSGSRDKTIKLW 469
N + +GS D+ I++W
Sbjct: 245 T-NGTVYTGSADRRIRVW 261
Score = 35.5 bits (78), Expect = 0.019
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Frame = +2
Query: 77 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 256
S + +RG LRGH+ + + D++LS S D+T+ +W+ D ++Y + L G
Sbjct: 313 SNYMAVRGALRGHDKAILSLFN---VSDLLLSGSADRTVRIWRRGPD-SSYSCLEV-LSG 367
Query: 257 HSHFISDVVL-----SSDGNYALSGSWDKTLRLWDLAAGKTTRRF 376
H+ + + D +SGS D ++ W ++ K F
Sbjct: 368 HTKPVKSLAAVREKELDDVVSIISGSLDGEVKCWKVSVTKPDNSF 412
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 50.0 bits (114), Expect = 8e-07
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = +2
Query: 185 KTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV--LSSDGNYALSGSWDKTLRLWDLAAG 358
K+L + + ++ +G+ +K + DV+ S + LS S DKT+RLW+L++
Sbjct: 485 KSLSLENIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKSQHLLSSSMDKTVRLWNLSS- 543
Query: 359 KTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 472
+T + H+ V + F+ VD+R +SGS D +++W+
Sbjct: 544 QTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWS 582
Score = 45.6 bits (103), Expect = 2e-05
Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Frame = +2
Query: 20 RGRT*RFRES----SLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDK 187
RGRT R+S ++F P S + K + +GH V +A + +LSSS DK
Sbjct: 477 RGRTSISRKSLSLENIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKS--QHLLSSSMDK 534
Query: 188 TLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKT 364
T+ +W L+ +++ HS +++ + + D Y +SGS D +R+W + +
Sbjct: 535 TVRLWNLSSQ------TCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPDRQV 588
Query: 365 TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
++ H + V S ++ D + ++ GS + ++++
Sbjct: 589 VDWYDLH-EMVTSACYTPDGQGVLVGSYKGSCRMYS 623
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 50.0 bits (114), Expect = 8e-07
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Frame = +2
Query: 167 LSSSRDKTLIVWKLTRDENNYGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLR 337
L S D T +V T + I +K L+ GH I D+ S G Y LS S D+T+R
Sbjct: 292 LRKSSDSTCVVLPPTI----FSISEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVR 346
Query: 338 LWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 472
LW + + R F H V VAF+ VD+ +SGS D +++W+
Sbjct: 347 LWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIWD 391
Score = 48.4 bits (110), Expect = 2e-06
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Frame = +2
Query: 107 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 286
+GH G + ++ + K +LSSS D+T+ +W++ DE R + H++F++ V
Sbjct: 319 KGHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDEC------LRTFTHNNFVTCVAF 370
Query: 287 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 445
+ D NY +SGS D +R+WD+ + + D V +V + D + V GS
Sbjct: 371 NPVDDNYFISGSIDGKVRIWDVTRCRVV-DYTDIRDIVTAVCYRPDAKGAVIGS 423
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 50.0 bits (114), Expect = 8e-07
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Frame = +2
Query: 167 LSSSRDKTLIVWKLTRDENNYGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLR 337
L S D T +V T + I +K L+ GH I D+ S G Y LS S D+T+R
Sbjct: 292 LRKSSDSTCVVLPPTI----FSISEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVR 346
Query: 338 LWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 472
LW + + R F H V VAF+ VD+ +SGS D +++W+
Sbjct: 347 LWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIWD 391
Score = 48.4 bits (110), Expect = 2e-06
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Frame = +2
Query: 107 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 286
+GH G + ++ + K +LSSS D+T+ +W++ DE R + H++F++ V
Sbjct: 319 KGHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDEC------LRTFTHNNFVTCVAF 370
Query: 287 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 445
+ D NY +SGS D +R+WD+ + + D V +V + D + V GS
Sbjct: 371 NPVDDNYFISGSIDGKVRIWDVTRCRVV-DYTDIRDIVTAVCYRPDAKGAVIGS 423
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 49.6 bits (113), Expect = 1e-06
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIPQ-KRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 337
M+ + + +++VWK T D + L GHS ++ + G SGS DKT++
Sbjct: 224 MLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVG--GQMLYSGSVDKTIK 281
Query: 338 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
+WDL + + HT V S+ ++ ++S S D TIK+W
Sbjct: 282 MWDLNTLQCIMTLKQHTGTVTSLL--CWDKCLISSSLDGTIKVW 323
Score = 30.7 bits (66), Expect = 0.53
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 377 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
E H+ +V F+V + + SGS DKTIK+W+
Sbjct: 255 EGHSGEV--TCFAVGGQMLYSGSVDKTIKMWD 284
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 361
L GH+ + + L + S S D TLR+WD +G+
Sbjct: 127 LEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQ 164
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 49.6 bits (113), Expect = 1e-06
Identities = 20/76 (26%), Positives = 37/76 (48%)
Frame = +2
Query: 242 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 421
K+L GH + + + G Y ++GS D+ +++W + H D+ +A S +
Sbjct: 299 KKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSN 358
Query: 422 NRQIVSGSRDKTIKLW 469
N + S S D I++W
Sbjct: 359 NALVASASNDFVIRVW 374
Score = 48.0 bits (109), Expect = 3e-06
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Frame = +2
Query: 50 SLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 229
++ KP S M + ++ LRGH V A + +++ S D+ + +W + E
Sbjct: 284 AIAKP-STMVQKMQNIKKLRGHRNAV-YCAIFDRSGRYVITGSDDRLVKIWSM---ETAL 338
Query: 230 GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 409
+ R GH I+D+ +SS+ S S D +R+W L G HT V ++A
Sbjct: 339 CLASCR--GHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIA 396
Query: 410 FS---VDNRQIVSGSRDKTIKLWN 472
FS Q++S S D T ++W+
Sbjct: 397 FSPRQASVYQLLSSSDDGTCRIWD 420
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 49.2 bits (112), Expect = 1e-06
Identities = 41/139 (29%), Positives = 57/139 (41%), Gaps = 7/139 (5%)
Frame = +2
Query: 77 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 256
S T+ RG GH V +A +P S D LI+W N +K
Sbjct: 279 SPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDA 338
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAA---GKTTRRFEDHTKDVLSVAFSV 418
H + D N L+GS D T+RL+D L A G +FE H VL V +S
Sbjct: 339 DLHCVD--WNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSP 396
Query: 419 DNRQIV-SGSRDKTIKLWN 472
D + S + D + +W+
Sbjct: 397 DKSSVFGSSAEDGLLNIWD 415
Score = 27.5 bits (58), Expect = 4.9
Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 8/93 (8%)
Frame = +2
Query: 113 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI-------PQKRLYGHSHFI 271
H G V +I P+ ++ + + +++W + N + + P L GH
Sbjct: 163 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNA 222
Query: 272 S-DVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 367
+ + + LSG DK++ LW + TT
Sbjct: 223 EFALAMCPTEPFVLSGGKDKSVVLWSIQDHITT 255
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 49.2 bits (112), Expect = 1e-06
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Frame = +2
Query: 113 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 289
H V + NP D L+SS D T+ +W + R + + H++ + V +
Sbjct: 105 HAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPAS-----VRTFKEHAYCVYQAVWNP 159
Query: 290 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 466
G+ S S D TLR+WD+ +T H ++LS ++ D+ + + S DKT+K+
Sbjct: 160 KHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKV 219
Query: 467 WN 472
W+
Sbjct: 220 WD 221
Score = 43.6 bits (98), Expect = 7e-05
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
T + H V Q NPK+ D+ S+S D TL +W + + IP +S
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDF----EILSCD 199
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVDNRQIV-SGSRDK 454
D + S DKT+++WD+ + + H V V FS R ++ S S D
Sbjct: 200 WNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDM 259
Query: 455 TIKLWN 472
++ LW+
Sbjct: 260 SVCLWD 265
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 49.2 bits (112), Expect = 1e-06
Identities = 27/113 (23%), Positives = 52/113 (46%)
Frame = +2
Query: 125 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 304
++ ++ +PK D+++++S D + W++TR + + K H + DG
Sbjct: 29 ISSLSFSPK-ADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTT 87
Query: 305 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
+G DK ++W L +G H +A+ +V+GS DKT+K
Sbjct: 88 VFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGMNLLVTGSWDKTLK 140
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 48.8 bits (111), Expect = 2e-06
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 436
H +S + L+ + SGSWDKTL++W L+ K + H + +VA D+ +
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDD-LLF 306
Query: 437 SGSRDKTIKLW 469
+GS D T+K+W
Sbjct: 307 TGSADGTLKVW 317
Score = 37.1 bits (82), Expect = 0.006
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 340
++ S S DKTL VW+L+ + + + H I+ V D + +GS D TL++
Sbjct: 263 LLYSGSWDKTLKVWRLSDSK-----CLESIQAHDDAINTVAAGFD-DLLFTGSADGTLKV 316
Query: 341 WDL-AAGKTTRRF-----EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
W GK T+ F V ++A ++ + GS D T+ W
Sbjct: 317 WKRELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGSSDGTVNFW 365
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 436
H +S + LS DG+ S SWD++ ++W + K E D ++ + +
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVY 250
Query: 437 SGSRDKTIKLWN 472
+GS DK IK+WN
Sbjct: 251 TGSADKKIKVWN 262
Score = 47.2 bits (107), Expect = 6e-06
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Frame = +2
Query: 59 KPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT---RDENNY 229
K ++K + L TL H V +A + ++ S + D++++VW+ DE +
Sbjct: 259 KVWNKKDKKHSLVATLTKHLSAVNALAISED-GKVLYSGACDRSILVWERLINGDDEELH 317
Query: 230 GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW-----DLAAGKTTRRFEDHTKD 394
L GH I + ++SD LSGS DK+LR+W + E HTK
Sbjct: 318 MSVVGALRGHRKAIMCLAVASD--LVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKP 375
Query: 395 VLSVAFSVDNRQ--------IVSGSRDKTIKLWN 472
V S+A SV + + SGS D ++K+WN
Sbjct: 376 VKSLAVSVSDSDSNSDYSCMVYSGSLDLSLKVWN 409
Score = 38.3 bits (85), Expect = 0.003
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 343
+ + S DK + VW +D+ + + L H ++ + +S DG SG+ D+++ +W
Sbjct: 249 VYTGSADKKIKVWN-KKDKKHSLVAT--LTKHLSAVNALAISEDGKVLYSGACDRSILVW 305
Query: 344 D-LAAG-------KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
+ L G H K ++ +A + D ++SGS DK++++W
Sbjct: 306 ERLINGDDEELHMSVVGALRGHRKAIMCLAVASD--LVLSGSADKSLRVW 353
Score = 37.5 bits (83), Expect = 0.005
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +2
Query: 98 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 277
G LRGH + +A D++LS S DK+L VW+ E L GH+ +
Sbjct: 322 GALRGHRKAIMCLAVAS---DLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKS 378
Query: 278 VVLS---SDGN-----YALSGSWDKTLRLWDL 349
+ +S SD N SGS D +L++W+L
Sbjct: 379 LAVSVSDSDSNSDYSCMVYSGSLDLSLKVWNL 410
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 48.4 bits (110), Expect = 2e-06
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +2
Query: 158 DMILSSSRDKTLIVWKLTRDENNYGIP-QKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 334
+++ S + L +WKL E N K L H + D+ S D Y +SGS D +
Sbjct: 18 ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSC 77
Query: 335 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
+WD+ G + + H V VA+ + + S S D+T +++
Sbjct: 78 IIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 122
Score = 31.5 bits (68), Expect = 0.30
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 359 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
K + H KDVL + +S D+ ++SGS D + +W+
Sbjct: 44 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWD 81
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 48.4 bits (110), Expect = 2e-06
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY-GHSHFISDV 280
LRGH+ ++ + +LS S D + +W + N + ++++ H + DV
Sbjct: 174 LRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDV 233
Query: 281 VLSSDGNYAL-SGSWDKTLRLWDL---AAGKTTRRFEDHTKDVLSVAFSVDNRQIVS-GS 445
Y S D+ L +WDL +A K + H+ +V +AF+ N +V+ GS
Sbjct: 234 AWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGS 293
Query: 446 RDKTIKLWN 472
DKT+KL++
Sbjct: 294 TDKTVKLFD 302
Score = 43.6 bits (98), Expect = 7e-05
Identities = 28/123 (22%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Frame = +2
Query: 77 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 256
+++L + + H G V +A + ++ + S D+ L++W L + P + +
Sbjct: 214 NKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASK--PVQSVVA 271
Query: 257 HSHFISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTT-RRFEDHTKDVLSVAFSVDNRQ 430
HS ++ + + + + +GS DKT++L+DL T F+ H ++V V ++ N
Sbjct: 272 HSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNET 331
Query: 431 IVS 439
I++
Sbjct: 332 ILA 334
Score = 33.9 bits (74), Expect = 0.057
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI------PQKRLY--- 253
T H V Q+ NPK ++ S + L+VW L+R + + P + L+
Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHG 371
Query: 254 GHSHFISDVVLSSDGNYALSG-SWDKTLRLWDLA 352
GH+ ISD + ++ +S + D L++W +A
Sbjct: 372 GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 48.4 bits (110), Expect = 2e-06
Identities = 30/118 (25%), Positives = 62/118 (52%)
Frame = +2
Query: 116 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD 295
NG V Q+ + D++ + ++D +++VW+ + + P L GH+ ++ V L
Sbjct: 220 NGPVGQVYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFD-PAASLLGHT--LAVVSLYVG 276
Query: 296 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
N SG+ D ++++W L + + +HT V+S+ ++ ++S S D T+K+W
Sbjct: 277 ANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLI--CWDQFLLSCSLDNTVKIW 332
Score = 35.1 bits (77), Expect = 0.024
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 245 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 367
+L GH ++ + L S + + S D+T+R+WD A+G+ T
Sbjct: 139 QLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCT 179
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 202
++ L L GH VT IA P D + ++S+D+T+ +W
Sbjct: 132 DSFSLLTQLDGHQKVVTGIAL-PSGSDKLYTASKDETVRIW 171
Score = 26.6 bits (56), Expect = 8.6
Identities = 8/34 (23%), Positives = 21/34 (61%)
Frame = +2
Query: 371 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+ + H K V +A + ++ + S+D+T+++W+
Sbjct: 139 QLDGHQKVVTGIALPSGSDKLYTASKDETVRIWD 172
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 48.4 bits (110), Expect = 2e-06
Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
T+ GH V +A + ++ S SRDK+++ + E++ +L GH I +
Sbjct: 246 TMEGHRLRVGALAWSSS---VLSSGSRDKSILQRDIRTQEDHVS----KLKGHKSEICGL 298
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS---GSRD 451
SSD SG D L +W+ + + RF +H V ++A+S + +++ G+ D
Sbjct: 299 KWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTAD 358
Query: 452 KTIKLWNT 475
+ I+ WNT
Sbjct: 359 RCIRFWNT 366
Score = 33.9 bits (74), Expect = 0.057
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 296 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
G + G+ T+++WD+ K R E H V ++A+S + + SGSRDK+I
Sbjct: 221 GTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWS--SSVLSSGSRDKSI 273
Score = 33.1 bits (72), Expect = 0.099
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 269 ISDVVLSSDGNYALS--GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSG 442
+ ++V S + N +S G + +W H+ VL +A S D + IV+G
Sbjct: 381 VCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTG 440
Query: 443 SRDKTIKLWN 472
+ D+T++ WN
Sbjct: 441 AGDETLRFWN 450
Score = 33.1 bits (72), Expect = 0.099
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 349
L GHS+ + + +S DG ++G+ D+TLR W++
Sbjct: 418 LTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 48.4 bits (110), Expect = 2e-06
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 299 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 472
NY S +D ++LWD+ G+ F +H K SV FS ++ SGS D ++KLWN
Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWN 825
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 383 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
H K V S A +DN +V+ S D T+KLW+
Sbjct: 881 HNKAV-SYAKFLDNETLVTASTDNTLKLWD 909
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 48.4 bits (110), Expect = 2e-06
Identities = 34/128 (26%), Positives = 62/128 (48%)
Frame = +2
Query: 89 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 268
+LR TL+GH G V I+++ I+S S D ++IVW D+ + ++ L GH
Sbjct: 890 ELRATLKGHTGTVRAISSD---RGKIVSGSDDLSVIVW----DKQTTQLLEE-LKGHDSQ 941
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 448
+S V + S G L+ + D T+++WD+ + +LS+ + + + R
Sbjct: 942 VSCVKMLS-GERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGR 1000
Query: 449 DKTIKLWN 472
D +W+
Sbjct: 1001 DTVANIWD 1008
Score = 41.9 bits (94), Expect = 2e-04
Identities = 32/131 (24%), Positives = 63/131 (48%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 259
+T +L L+GH+ V+ + + +L+++ D T+ +W + D + +
Sbjct: 927 QTTQLLEELKGHDSQVSCVKMLSG--ERVLTAAHDGTVKMWDVRTDMCVATVGRCS---- 980
Query: 260 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 439
S +S S G A +G D +WD+ +GK + + HTK + S+ D +++
Sbjct: 981 SAILSLEYDDSTGILAAAGR-DTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDT--LIT 1037
Query: 440 GSRDKTIKLWN 472
GS D T ++W+
Sbjct: 1038 GSDDWTARVWS 1048
Score = 36.3 bits (80), Expect = 0.011
Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 11/134 (8%)
Frame = +2
Query: 104 LRGHNGWVTQI--ATNPKYPDMI---------LSSSRDKTLIVWKLTRDENNYGIPQKRL 250
L+GH G VT + T + D++ +S S D + +W + + + L
Sbjct: 839 LKGHGGAVTALHSVTRREVCDLVGDREDAGFFISGSTDCLVKIWDPSLRGSEL---RATL 895
Query: 251 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 430
GH+ + +SSD +SGS D ++ +WD + + H V V + +
Sbjct: 896 KGHTGTVR--AISSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKM-LSGER 952
Query: 431 IVSGSRDKTIKLWN 472
+++ + D T+K+W+
Sbjct: 953 VLTAAHDGTVKMWD 966
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 48.0 bits (109), Expect = 3e-06
Identities = 34/117 (29%), Positives = 53/117 (45%)
Frame = +2
Query: 119 GWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDG 298
G V Q+ M+ + + +++VWK T E++ L GH H G
Sbjct: 264 GVVGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGH-HSGEVTCFVVGG 322
Query: 299 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
SGS DKT+++WDL + + H V S+ ++ ++S S D TIKLW
Sbjct: 323 EVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLL--CWDKCLISSSLDGTIKLW 377
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 370
L GH + I + L + S S D TL +WD +G+ R
Sbjct: 183 LEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVR 223
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 48.0 bits (109), Expect = 3e-06
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 236 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 415
P L GH I D+ S LS S DKT+RLWD+ KT + H V + FS
Sbjct: 498 PVCSLKGHLDAILDLSWSKS-QLLLSSSMDKTVRLWDIET-KTCLKLFAHNDYVTCIQFS 555
Query: 416 -VDNRQIVSGSRDKTIKLWN 472
VD +SGS D I++W+
Sbjct: 556 PVDENYFLSGSLDAKIRIWS 575
Score = 44.4 bits (100), Expect = 4e-05
Identities = 31/126 (24%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
+L+GH + ++ + ++LSSS DKT+ +W + E + +L+ H+ +++ +
Sbjct: 501 SLKGHLDAILDLSWSKS--QLLLSSSMDKTVRLWDI---ETKTCL---KLFAHNDYVTCI 552
Query: 281 VLSS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 457
S D NY LSGS D +R+W + + + D + V + ++ D + + GS
Sbjct: 553 QFSPVDENYFLSGSLDAKIRIWSI-QDRHVVEWSDLHEMVTAACYTPDGQGALIGSHKGI 611
Query: 458 IKLWNT 475
+ ++T
Sbjct: 612 CRAYDT 617
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 47.6 bits (108), Expect = 4e-06
Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 8/151 (5%)
Frame = +2
Query: 41 RESSLFKPFSKMSETLKLRGT--LRGH-NGWVTQIATNPKYPDMILSSSRDKTLI-VWKL 208
+E S FK S + + + + G GH +G + +PK + S TL ++K
Sbjct: 125 KEFSAFKCNSGLVKAIVISGEKIFTGHQDGKIRVWKVSPKNQSLHKRSGTLPTLKDIFKA 184
Query: 209 TRDENNYGIPQKRLYG----HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 376
+ NY +K H+ +S + L+ + S SWD+T+++W +A K
Sbjct: 185 SLKPRNYVEVKKHRTALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESI 244
Query: 377 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
H V SV S + SGS D T+K W
Sbjct: 245 PAHDDAVNSVV-STTEAIVFSGSADGTVKAW 274
Score = 33.5 bits (73), Expect = 0.075
Identities = 38/137 (27%), Positives = 55/137 (40%), Gaps = 11/137 (8%)
Frame = +2
Query: 92 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 271
L TL VT +A + + SS D + W+ + N GI L GH +
Sbjct: 287 LMQTLTKQESAVTALAVSKNGAAVYFGSS-DGLVNFWEREKQLNYGGI----LKGHK--L 339
Query: 272 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQ----- 430
+ + L G+ SGS DKT+ +W T HT V +A D
Sbjct: 340 AVLCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEADREASERRD 399
Query: 431 ----IVSGSRDKTIKLW 469
+ SGS DK++K+W
Sbjct: 400 KKWIVYSGSLDKSVKVW 416
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 47.2 bits (107), Expect = 6e-06
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
+L GH VT I + + ++ S+ D + VW + ++ + H+ + DV
Sbjct: 155 SLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKK---KVRAFLHHNAPVKDV 211
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQI-VSGSRDK 454
S G LS +D T RL+D+ G T+ F ED V V F DN + +SG
Sbjct: 212 KWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGV--VKFHPDNCNVFLSGGSKG 269
Query: 455 TIKLWN 472
+++LW+
Sbjct: 270 SLRLWD 275
Score = 34.7 bits (76), Expect = 0.032
Identities = 32/119 (26%), Positives = 48/119 (40%)
Frame = +2
Query: 89 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 268
K+R L HN V + + K +LS D T ++ + R + + G F
Sbjct: 197 KVRAFLH-HNAPVKDVKWS-KQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKF 254
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 445
D + N LSG +LRLWD+ A K + +L V F +Q +S S
Sbjct: 255 HPD-----NCNVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSS 308
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 47.2 bits (107), Expect = 6e-06
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +2
Query: 299 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKL 466
N SGS DK +++WD+A GK E H K V +VA++ ++ +SGSRD+T+ L
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVL 284
Score = 32.3 bits (70), Expect = 0.17
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Frame = +2
Query: 296 GNYALSGSWDKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIV-SGSRDK 454
GN+ G+ + ++ +WDL R T + + F+ +NR IV SGS DK
Sbjct: 180 GNFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQT--LFFLTFNWENRNIVASGSEDK 237
Query: 455 TIKLWN 472
+K+W+
Sbjct: 238 KVKVWD 243
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 47.2 bits (107), Expect = 6e-06
Identities = 25/76 (32%), Positives = 36/76 (47%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 427
L GH+ + D+ S D + SGS D T+ +W++ G T H V V +
Sbjct: 114 LRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGS 173
Query: 428 QIVSGSRDKTIKLWNT 475
I S S DKT+ +W T
Sbjct: 174 FIASQSDDKTVIIWRT 189
Score = 41.1 bits (92), Expect = 4e-04
Identities = 31/111 (27%), Positives = 45/111 (40%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 259
E K TLRGH V + +P M+ S S D T+ +W + G+ L GH
Sbjct: 106 ENWKAVMTLRGHTADVVDLNWSPD-DSMLASGSLDNTVHIWNMRT-----GMCTTVLRGH 159
Query: 260 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 412
+ V G++ S S DKT+ +W + R + H L F
Sbjct: 160 LSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGHWAKSLGSTF 210
Score = 36.7 bits (81), Expect = 0.008
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 344 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
D+ K HT DV+ + +S D+ + SGS D T+ +WN
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWN 146
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 47.2 bits (107), Expect = 6e-06
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +2
Query: 224 NYGIPQKRLYGHSHFISD--VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 397
++ PQ + + S S + ++SDG G D +++L KT H V
Sbjct: 2612 DWQFPQAQAFASSGIRSSSVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPV 2671
Query: 398 LSVAFSVDNRQIVSGSRDKTIKLW 469
+A S DN +V+GSRD T+ LW
Sbjct: 2672 TCLALSPDNNFLVTGSRDSTVLLW 2695
Score = 33.1 bits (72), Expect = 0.099
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 251 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 370
+GH ++ + LS D N+ ++GS D T+ LW + T+R
Sbjct: 2665 FGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKAFTSR 2704
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 77 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 208
S+ K T GH VT +A +P + +++ SRD T+++W++
Sbjct: 2655 SDGAKTLETAFGHCAPVTCLALSPDN-NFLVTGSRDSTVLLWRI 2697
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 47.2 bits (107), Expect = 6e-06
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 236 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 415
P + LYGH+ + D+ S D N LS S DKT+RLW + F H V V F+
Sbjct: 264 PFQELYGHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFN 321
Query: 416 -VDNRQIVSGSRDKTIKLW 469
V+ SGS D ++W
Sbjct: 322 PVNKNNFASGSIDGKARIW 340
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 383 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 475
HT DVL +A+S D+ ++S S+DKT++LW T
Sbjct: 271 HTGDVLDLAWS-DSNLLLSASKDKTVRLWRT 300
Score = 37.1 bits (82), Expect = 0.006
Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
L GH G V +A + +++LS+S+DKT+ +W+ D+ + ++ H+++++ V
Sbjct: 268 LYGHTGDVLDLAWSDS--NLLLSASKDKTVRLWRTGCDQCLH------VFHHNNYVTCVE 319
Query: 284 LS--SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSG 442
+ + N+A SGS D R+W L+ + + D + ++++ + V G
Sbjct: 320 FNPVNKNNFA-SGSIDGKARIWGLSEERVV-AWTDVRDSISAISYQPNGNGFVVG 372
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 46.8 bits (106), Expect = 7e-06
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +2
Query: 251 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 430
+ H IS + LS D SGSWDKT ++W ++ + H +D ++ S +
Sbjct: 208 FRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAH-EDAVNAVVSGFDGL 266
Query: 431 IVSGSRDKTIKLW 469
+ +GS D T+K+W
Sbjct: 267 VFTGSADGTVKVW 279
Score = 31.9 bits (69), Expect = 0.23
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 12/127 (9%)
Frame = +2
Query: 125 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 304
VT IA + ++ S D T+ W+ + N G+ L GH ++ + L + GN
Sbjct: 303 VTAIAVDQS-ATLVYCGSSDGTVNFWERENNMKNGGV----LKGHK--LAVLCLVAAGNL 355
Query: 305 ALSGSWDKTLRLWDLAAG----KTTRRFEDHTKDVLSVAFSVDNRQ--------IVSGSR 448
SGS D +R+W G H V +A D + SGS
Sbjct: 356 MFSGSADLGIRVWRRPEGGGEHVCLSVLTGHAGPVKCLAVERDQESVSGERRWIVYSGSL 415
Query: 449 DKTIKLW 469
D+++K+W
Sbjct: 416 DRSVKMW 422
Score = 29.1 bits (62), Expect = 1.6
Identities = 29/104 (27%), Positives = 43/104 (41%)
Frame = +2
Query: 158 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 337
D I + +D + VWK E+N R G + D + +S + S+ R
Sbjct: 147 DKIFTGHQDGKIRVWKAASKESNV----HRRVGTMPNLLDYIRNS----IVPSSYFNFTR 198
Query: 338 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
+A R H + +A S D R + SGS DKT K+W
Sbjct: 199 RNRSSAALGFR----HLDAISCLALSEDKRLLYSGSWDKTFKVW 238
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 46.4 bits (105), Expect = 1e-05
Identities = 30/113 (26%), Positives = 54/113 (47%)
Frame = +2
Query: 131 QIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL 310
++ T P + M+ SS K + ++ R+ N+ + K H+ +S + L +
Sbjct: 200 RVGTLPTFKSMVKSSVNPKHFM--EVRRNRNS--VKTK----HNDAVSSLSLDVELGLLY 251
Query: 311 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
S SWD T+++W +A K H + SV D+ + +GS D T+K+W
Sbjct: 252 SSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDD-LVFTGSADGTVKVW 303
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 46.4 bits (105), Expect = 1e-05
Identities = 26/84 (30%), Positives = 41/84 (48%)
Frame = +2
Query: 98 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 277
G + GH V+ +A NP Y I S+S D + +W ++ P GH +
Sbjct: 50 GAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFP-----GHQGAVRG 104
Query: 278 VVLSSDGNYALSGSWDKTLRLWDL 349
+ S+DGN +S D T+RLW++
Sbjct: 105 LTASTDGNVLVSCGTDCTVRLWNV 128
Score = 41.1 bits (92), Expect = 4e-04
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD---VLSVAFSVDNR 427
H + D+ S G ++GS+D+++R++ G + + HTK V V +S D
Sbjct: 278 HVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIY--HTKRMQRVFCVKYSCDAT 335
Query: 428 QIVSGSRDKTIKLW 469
++SGS D ++LW
Sbjct: 336 YVISGSDDTNLRLW 349
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 278 VVLSSDGNYALSGSWDKTLRLWDLAAGK 361
V S D Y +SGS D LRLW A +
Sbjct: 328 VKYSCDATYVISGSDDTNLRLWKAKASE 355
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +2
Query: 299 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 472
NY S +D +++WD G+ ++ +H K SV FS D + VSGS D ++KLW+
Sbjct: 779 NYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWS 837
Score = 37.9 bits (84), Expect = 0.003
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Frame = +2
Query: 143 NPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALS-GS 319
+P P +S S D ++ +W + ++ + G ++ ++ + V SS N+ L+ GS
Sbjct: 817 SPSDPTKFVSGSDDCSVKLWSIN-EKRSLGT----IWSPAN-VCCVQFSSYSNHLLAFGS 870
Query: 320 WDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
D + +DL KT H K V V F +D+ IVS S D ++KLWN
Sbjct: 871 ADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKF-MDSETIVSASTDNSLKLWN 921
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = +2
Query: 242 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 421
K+L GHS ++D SS+ Y S S DKT+R+W+L+ G R + V+
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYGISPQYCIRFHPVN 269
Query: 422 NRQIVSGSRDKTIKLWN 472
N + +G+ +K + ++N
Sbjct: 270 NNFLSAGNANKELTVFN 286
Score = 35.5 bits (78), Expect = 0.019
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Frame = +2
Query: 104 LRGHNGWVTQI--ATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 277
L GH+ VT ++N +Y I SSS DKT+ VW+L+R G+ + +YG S
Sbjct: 212 LTGHSKDVTDFDFSSNNQY---IASSSLDKTIRVWELSR-----GVCIRVIYGISPQYCI 263
Query: 278 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR--FED 382
+ N+ +G+ +K L +++ + G+ ++ FED
Sbjct: 264 RFHPVNNNFLSAGNANKELTVFNFSTGRIIKKLLFED 300
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 46.4 bits (105), Expect = 1e-05
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 289
GHN VT P +I + S D +LIVW E+ + I + Y H+ ++ + ++
Sbjct: 195 GHNLNVTCGDFTPD-GKLICTGSDDASLIVWNPKTCESIH-IVKGHPY-HTEGLTCLDIN 251
Query: 290 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI---VSGSRDKTI 460
S+ + A+SGS D ++ + ++ GK HT V V FS + I +G DK +
Sbjct: 252 SNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKL 311
Query: 461 KLWN 472
+W+
Sbjct: 312 IIWD 315
Score = 45.6 bits (103), Expect = 2e-05
Identities = 27/124 (21%), Positives = 54/124 (43%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
T GH G + +A +P ++ + D +WK+ + +P GH +S +
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELP-----GHKDSVSCL 119
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
S DG SG D ++++D ++G + + V + +++GS D ++
Sbjct: 120 AFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSL 179
Query: 461 KLWN 472
+WN
Sbjct: 180 WMWN 183
Score = 41.1 bits (92), Expect = 4e-04
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Frame = +2
Query: 83 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSS--RDKTLIVWKLTRDENNYGIPQKRLYG 256
T K+ +L H V + +P + L+++ DK LI+W L + +
Sbjct: 273 TGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRF------ICE 326
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 436
H ++ + Y +G + T+ +WD G + H V +++ S + IV
Sbjct: 327 HEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIV 386
Query: 437 SGSRDKTIKLWNT 475
S S D T +++ +
Sbjct: 387 SVSVDNTARVFES 399
Score = 33.5 bits (73), Expect = 0.075
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +2
Query: 215 DENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 391
DEN+ + GH + + S +D +G D LW + G H
Sbjct: 57 DENDDSV--HTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKD 114
Query: 392 DVLSVAFSVDNRQIVSGSRDKTIKLWN 472
V +AFS D + + SG D +++++
Sbjct: 115 SVSCLAFSYDGQLLASGGLDGVVQIFD 141
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 46.0 bits (104), Expect = 1e-05
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNR 427
G S I+ V SS G+ ++ S D +RL+D + K R + H K +V S F+ D R
Sbjct: 172 GVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQR 231
Query: 428 QIVSGSRDKTIKLW 469
++S +D T+KLW
Sbjct: 232 FVLSSGKDSTVKLW 245
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 46.0 bits (104), Expect = 1e-05
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNR 427
G S I+ V SS G+ ++ S D +RL+D + K R + H K +V S F+ D R
Sbjct: 264 GVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQR 323
Query: 428 QIVSGSRDKTIKLW 469
++S +D T+KLW
Sbjct: 324 FVLSSGKDSTVKLW 337
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 46.0 bits (104), Expect = 1e-05
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 302 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+ S +D R+WDL + F+ H K VLSV FS + + SG D ++W+
Sbjct: 144 FKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWD 200
Score = 38.3 bits (85), Expect = 0.003
Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Frame = +2
Query: 170 SSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 349
SS D VW L R N I Q GH + V S +G + SG D R+WDL
Sbjct: 147 SSGFDSLARVWDL-RTARNILIFQ----GHIKQVLSVDFSPNGYHLASGGEDNQCRIWDL 201
Query: 350 AAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWN 472
K H V V + R + + S D + +W+
Sbjct: 202 RMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWS 243
Score = 34.3 bits (75), Expect = 0.043
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +2
Query: 251 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF---EDHTKDVLSVAFS-V 418
+G ++ LS DG ++ S +LW++ + T + + H + V V FS V
Sbjct: 60 FGDDRPLTGCSLSRDGKILVTCSLSGVPKLWEVP--QVTNKIVVLKGHKEHVTDVVFSSV 117
Query: 419 DNRQIVSGSRDKTIKLWNT 475
D+ + + S D+T K+W T
Sbjct: 118 DDECLATASTDRTEKIWKT 136
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 45.6 bits (103), Expect = 2e-05
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +2
Query: 218 ENNYGIPQKRLYGHSHFISDVV-LS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 391
E + + K + + + DV+ LS S LS S DKT+RLWD+ + F H
Sbjct: 502 ETVFSLSDKPICSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLFA-HND 560
Query: 392 DVLSVAFS-VDNRQIVSGSRDKTIKLWN 472
V V F+ +D +SGS D I++WN
Sbjct: 561 YVTCVQFNPLDEDYFISGSLDAKIRIWN 588
Score = 41.9 bits (94), Expect = 2e-04
Identities = 26/105 (24%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLR 337
++LSSS DKT+ +W + +L+ H+ +++ V + D +Y +SGS D +R
Sbjct: 532 LLLSSSMDKTVRLWDIETQSC------LKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIR 585
Query: 338 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+W++ + + + D + V +V ++ D + GS + +L++
Sbjct: 586 IWNI-SNRQVVEWNDLKEMVTAVCYTPDGQAAFVGSINGHCRLYS 629
Score = 30.7 bits (66), Expect = 0.53
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
L HN +VT + NP D +S S D + +W ++ N + L ++ V
Sbjct: 555 LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNIS---NRQVVEWNDL---KEMVTAVC 608
Query: 284 LSSDGNYALSGSWDKTLRLW 343
+ DG A GS + RL+
Sbjct: 609 YTPDGQAAFVGSINGHCRLY 628
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 45.6 bits (103), Expect = 2e-05
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
TL GH V ++ N + + SRDK++ +W++ + N Y L GH+ + V
Sbjct: 113 TLEGHENEVKSVSWNAS-GSCLATCSRDKSVWIWEVL-EGNEYDCAAV-LTGHTQDVKMV 169
Query: 281 VLSSDGNYALSGSWDKTLRLW-------DLAAGKTTRRFED-HTKDVLSVAFSVDNRQIV 436
+ S S+D T+++W + +T + H+ V S++F+ ++V
Sbjct: 170 QWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMV 229
Query: 437 SGSRDKTIKLWNT 475
+ S D T+K+W T
Sbjct: 230 TCSDDLTLKIWGT 242
Score = 29.9 bits (64), Expect = 0.92
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +2
Query: 311 SGSWDKTLRLWD---LAAGKTTRRF--EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
S S D T+R+W+ L+ T + E HT+ V S A+S + + + S D T +W
Sbjct: 44 SCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIW 101
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 45.2 bits (102), Expect = 2e-05
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHTKDVLSVAFS 415
GH+ + + S GN SG D + +WD LA+ K TR RFE+HT V ++A+
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWC 309
Query: 416 VDNRQIVS---GSRDKTIKLWNT 475
+++ G D IK WNT
Sbjct: 310 PFQASLLATGGGVGDGKIKFWNT 332
Score = 30.7 bits (66), Expect = 0.53
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +2
Query: 314 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
G L LW + HT VL +A S + + S + D+ ++LWN
Sbjct: 364 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWN 416
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 45.2 bits (102), Expect = 2e-05
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Frame = +2
Query: 104 LRGHNGWVTQIA---TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY----GHS 262
L GH+G ++ +A +N + ++S+D+TL ++K E+ + R Y GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 263 HFISDVVLSSDGNYALSGSWDKTLRLWD 346
+ V GN S SWD T+ LW+
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWN 233
Score = 42.7 bits (96), Expect = 1e-04
Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 23/162 (14%)
Frame = +2
Query: 56 FKPFSKMSETLKLRG--TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT------ 211
F P + T K+R LRGH V ++ K +M+ SSS D T+ +W
Sbjct: 183 FDPAESVDSTTKVRAYKILRGHKASVQSVSAQ-KSGNMVCSSSWDCTINLWNTNESTSEG 241
Query: 212 -------RDENNY-------GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 349
R NN G L GH+ +S VV + + S SWD ++R WD+
Sbjct: 242 ESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDV 300
Query: 350 AAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
GK + F + + V + I +G D +++W+
Sbjct: 301 ETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWD 341
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 45.2 bits (102), Expect = 2e-05
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Frame = +2
Query: 104 LRGHNGWVTQIA---TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY----GHS 262
L GH+G ++ +A +N + ++S+D+TL ++K E+ + R Y GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 263 HFISDVVLSSDGNYALSGSWDKTLRLWD 346
+ V GN S SWD T+ LW+
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWN 233
Score = 42.7 bits (96), Expect = 1e-04
Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 23/162 (14%)
Frame = +2
Query: 56 FKPFSKMSETLKLRG--TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT------ 211
F P + T K+R LRGH V ++ K +M+ SSS D T+ +W
Sbjct: 183 FDPAESVDSTTKVRAYKILRGHKASVQSVSAQ-KSGNMVCSSSWDCTINLWNTNESTSEG 241
Query: 212 -------RDENNY-------GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 349
R NN G L GH+ +S VV + + S SWD ++R WD+
Sbjct: 242 ESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDV 300
Query: 350 AAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
GK + F + + V + I +G D +++W+
Sbjct: 301 ETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWD 341
Score = 33.5 bits (73), Expect = 0.075
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL-SSDGNYALSGSWDKTLR 337
+I + D L VW + + P + HS +IS S + LS S+D +
Sbjct: 327 LIAAGGSDPILRVWDPRKPGTS--APVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIM 384
Query: 338 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
LWDL + H VLS + +VSG D +++
Sbjct: 385 LWDLRTAWPLSVIDTHNDKVLSADW-WKGESVVSGGADSNLRI 426
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 45.2 bits (102), Expect = 2e-05
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
T+ GH V +A ++ S SRDK+++ + E++ +L GH + +
Sbjct: 289 TMEGHRLRVGALAWGSS---VLSSGSRDKSILQRDIRCQEDHVS----KLAGHKSEVCGL 341
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS---GSRD 451
S D SG D L +W+ + + ++ +HT V ++A+S +++ G+ D
Sbjct: 342 KWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTAD 401
Query: 452 KTIKLWNT 475
+ I+ WNT
Sbjct: 402 RCIRFWNT 409
Score = 33.9 bits (74), Expect = 0.057
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 383 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
HT VL +A S D + IV+G+ D+T++ WN
Sbjct: 464 HTYRVLYLAVSPDGQTIVTGAGDETLRFWN 493
Score = 31.9 bits (69), Expect = 0.23
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 349
L GH++ + + +S DG ++G+ D+TLR W++
Sbjct: 461 LTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
Score = 31.5 bits (68), Expect = 0.30
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 296 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
G + G+ +++WD + K TR E H V ++A+ + + SGSRDK+I
Sbjct: 264 GTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWG--SSVLSSGSRDKSI 316
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 44.8 bits (101), Expect = 3e-05
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +2
Query: 308 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+SG D +R+WD GK ++ ++ H + + S+ + D+ ++GS DKT KLW+
Sbjct: 191 VSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWD 248
Score = 41.9 bits (94), Expect = 2e-04
Identities = 33/111 (29%), Positives = 55/111 (49%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
++GH +T + N + D++ S ++D T VW +N + R GHS +
Sbjct: 33 MKGHERPLTFLRYN-RNGDLLFSCAKDHTPTVWFA---DNGERLGTYR--GHSGAVWCCD 86
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 436
+S D + ++GS D+T +LWD+ +GK F+ SV FSV + V
Sbjct: 87 ISRDSSRLITGSADQTAKLWDVKSGKELFTFK-FGAPARSVDFSVGDHLAV 136
Score = 37.9 bits (84), Expect = 0.003
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 433
GH ++ + + +G+ S + D T +W G+ + H+ V S D+ ++
Sbjct: 35 GHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRL 94
Query: 434 VSGSRDKTIKLWN 472
++GS D+T KLW+
Sbjct: 95 ITGSADQTAKLWD 107
Score = 35.1 bits (77), Expect = 0.024
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQ 430
GH I+ + ++D ++ L+GS DKT +LWD+ + + V +VA S + N
Sbjct: 218 GHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTT-VVPVNAVAMSPLLNHV 276
Query: 431 IVSGSRD 451
++ G +D
Sbjct: 277 VLGGGQD 283
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 340
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 522 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 576
Query: 341 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWN 472
WD + G R H V+S+ F +++ S + I+ W+
Sbjct: 577 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD 622
Score = 41.9 bits (94), Expect = 2e-04
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 517 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 576
Query: 467 WN 472
W+
Sbjct: 577 WD 578
Score = 27.1 bits (57), Expect = 6.5
Identities = 26/121 (21%), Positives = 52/121 (42%)
Frame = +2
Query: 107 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 286
+GH+ V + +P +++ S S D + W L+ + + + + F S V
Sbjct: 672 KGHSSNVHSVCWSPN-GELVASVSEDAVKL-WSLSSGDCIHELSNSG----NKFHSVVFH 725
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
S + + G + + + LW+ K H + ++A S + S S DK++K+
Sbjct: 726 PSYPDLLVIGGY-QAIELWNTMENKCMT-VAGHECVISALAQSPSTGVVASASHDKSVKI 783
Query: 467 W 469
W
Sbjct: 784 W 784
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 205
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 752 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 785
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 340
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 341 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWN 472
WD + G R H V+S+ F +++ S + I+ W+
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD 624
Score = 41.9 bits (94), Expect = 2e-04
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 467 WN 472
W+
Sbjct: 579 WD 580
Score = 27.1 bits (57), Expect = 6.5
Identities = 26/121 (21%), Positives = 52/121 (42%)
Frame = +2
Query: 107 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 286
+GH+ V + +P +++ S S D + W L+ + + + + F S V
Sbjct: 674 KGHSSNVHSVCWSPN-GELVASVSEDAVKL-WSLSSGDCIHELSNSG----NKFHSVVFH 727
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
S + + G + + + LW+ K H + ++A S + S S DK++K+
Sbjct: 728 PSYPDLLVIGGY-QAIELWNTMENKCMT-VAGHECVISALAQSPSTGVVASASHDKSVKI 785
Query: 467 W 469
W
Sbjct: 786 W 786
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 205
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 340
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 341 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWN 472
WD + G R H V+S+ F +++ S + I+ W+
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD 624
Score = 41.9 bits (94), Expect = 2e-04
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 467 WN 472
W+
Sbjct: 579 WD 580
Score = 27.1 bits (57), Expect = 6.5
Identities = 26/121 (21%), Positives = 52/121 (42%)
Frame = +2
Query: 107 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 286
+GH+ V + +P +++ S S D + W L+ + + + + F S V
Sbjct: 674 KGHSSNVHSVCWSPN-GELVASVSEDAVKL-WSLSSGDCIHELSNSG----NKFHSVVFH 727
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
S + + G + + + LW+ K H + ++A S + S S DK++K+
Sbjct: 728 PSYPDLLVIGGY-QAIELWNTMENKCMT-VAGHECVISALAQSPSTGVVASASHDKSVKI 785
Query: 467 W 469
W
Sbjct: 786 W 786
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 205
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 340
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 341 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWN 472
WD + G R H V+S+ F +++ S + I+ W+
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD 624
Score = 41.9 bits (94), Expect = 2e-04
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 467 WN 472
W+
Sbjct: 579 WD 580
Score = 27.1 bits (57), Expect = 6.5
Identities = 26/121 (21%), Positives = 52/121 (42%)
Frame = +2
Query: 107 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 286
+GH+ V + +P +++ S S D + W L+ + + + + F S V
Sbjct: 674 KGHSSNVHSVCWSPN-GELVASVSEDAVKL-WSLSSGDCIHELSNSG----NKFHSVVFH 727
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
S + + G + + + LW+ K H + ++A S + S S DK++K+
Sbjct: 728 PSYPDLLVIGGY-QAIELWNTMENKCMT-VAGHECVISALAQSPSTGVVASASHDKSVKI 785
Query: 467 W 469
W
Sbjct: 786 W 786
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 205
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 340
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 341 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWN 472
WD + G R H V+S+ F +++ S + I+ W+
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD 624
Score = 41.9 bits (94), Expect = 2e-04
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 467 WN 472
W+
Sbjct: 579 WD 580
Score = 27.1 bits (57), Expect = 6.5
Identities = 26/121 (21%), Positives = 52/121 (42%)
Frame = +2
Query: 107 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 286
+GH+ V + +P +++ S S D + W L+ + + + + F S V
Sbjct: 674 KGHSSNVHSVCWSPN-GELVASVSEDAVKL-WSLSSGDCIHELSNSG----NKFHSVVFH 727
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
S + + G + + + LW+ K H + ++A S + S S DK++K+
Sbjct: 728 PSYPDLLVIGGY-QAIELWNTMENKCMT-VAGHECVISALAQSPSTGVVASASHDKSVKI 785
Query: 467 W 469
W
Sbjct: 786 W 786
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 205
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 44.4 bits (100), Expect = 4e-05
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 236 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 415
P GHS I D+ S + N LS S D ++RLW + F H V SV F+
Sbjct: 348 PLHEFLGHSGDILDISWSKN-NRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFN 405
Query: 416 -VDNRQIVSGSRDKTIKLWN 472
VD+ +SGS D +++W+
Sbjct: 406 PVDDDHFISGSIDGKVRIWS 425
Score = 31.5 bits (68), Expect = 0.30
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 359 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
K F H+ D+L +++S +NR ++S S D +++LW
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLW 382
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 113 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 214
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
Score = 27.1 bits (57), Expect = 6.5
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 398 LSVAFSVDNRQIVSGSRDKTIKLWN 472
+S +F+ D + IVS D ++ +WN
Sbjct: 539 ISASFTADGKHIVSACDDSSVYVWN 563
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 44.4 bits (100), Expect = 4e-05
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 236 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 415
P GHS I D+ S + N LS S D ++RLW + F H V SV F+
Sbjct: 348 PLHEFLGHSGDILDISWSKN-NRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFN 405
Query: 416 -VDNRQIVSGSRDKTIKLWN 472
VD+ +SGS D +++W+
Sbjct: 406 PVDDDHFISGSIDGKVRIWS 425
Score = 31.5 bits (68), Expect = 0.30
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 359 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
K F H+ D+L +++S +NR ++S S D +++LW
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLW 382
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 113 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 214
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
Score = 27.1 bits (57), Expect = 6.5
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 398 LSVAFSVDNRQIVSGSRDKTIKLWN 472
+S +F+ D + IVS D ++ +WN
Sbjct: 535 ISASFTADGKHIVSACDDSSVYVWN 559
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 44.4 bits (100), Expect = 4e-05
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 340
M+ S+ DK ++W + P+ L H+ I+D+ S + S+DKT+R+
Sbjct: 665 MLASAGHDKKAVLWYTDTMK-----PKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRV 719
Query: 341 WDL-AAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWN 472
WD G + R F H+ V S+ F + + I S D I+ W+
Sbjct: 720 WDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWS 765
Score = 43.2 bits (97), Expect = 9e-05
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +2
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
SSDG S DK LW K E+HT + + FS ++ + S DKT+++
Sbjct: 660 SSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRV 719
Query: 467 WN 472
W+
Sbjct: 720 WD 721
Score = 27.9 bits (59), Expect = 3.7
Identities = 29/123 (23%), Positives = 46/123 (37%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
T GH+ VT + +P D+I S D + W + N G + G S I
Sbjct: 731 TFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSI-----NNGSCTRVYKGGSTQIR-- 783
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
G Y L+ S + + D+ + H + SV + + S S D +
Sbjct: 784 FQPRVGKY-LAASSANLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSED-MV 841
Query: 461 KLW 469
K+W
Sbjct: 842 KVW 844
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 44.4 bits (100), Expect = 4e-05
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 24/147 (16%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
L GHN +V + +PK D+++S+S D+T+ VW + + P L S SD+
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLF 189
Query: 284 LSSDG-------------NYA---------LSGSWDKTLRLWDLAAGKTTR--RFEDHTK 391
D N+A +SG+ D+ ++LW + K H
Sbjct: 190 GGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMN 249
Query: 392 DVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+V SV F IVS S DK+I++W+
Sbjct: 250 NVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 427
L GH +I V + + +S S D+T+R+W+ + H V+ +F
Sbjct: 89 LLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
Query: 428 QIVSGSRDKTIKLWN 472
+VS S D+T+++W+
Sbjct: 149 LVVSASLDQTVRVWD 163
Score = 40.3 bits (90), Expect = 7e-04
Identities = 24/87 (27%), Positives = 45/87 (51%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
TL GH ++ + + + P I+S+S D+T+ +W + + L GH+H++
Sbjct: 88 TLLGHLDYIRTVQFHHENP-WIVSASDDQTIRIWNW-QSRTCISV----LTGHNHYVMCA 141
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAGK 361
+ +S S D+T+R+WD+ A K
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGALK 168
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 332 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
++LWD G RF++H V V F VSG D IK+WN
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWN 79
Score = 37.5 bits (83), Expect = 0.005
Identities = 29/116 (25%), Positives = 50/116 (43%)
Frame = +2
Query: 125 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 304
V ++ +PK P IL+S + +W + G R H + V +
Sbjct: 12 VKGLSFHPKRP-WILASLHSGVIQLW-----DYRMGTLIDRFDEHEGPVRGVHFHNSQPL 65
Query: 305 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+SG D +++W+ + H + +V F +N IVS S D+TI++WN
Sbjct: 66 FVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWN 121
Score = 33.5 bits (73), Expect = 0.075
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 71 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 214
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 44.0 bits (99), Expect = 5e-05
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Frame = +2
Query: 107 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 286
+GH V +A N + S S D+T +W + + L GH+ + +
Sbjct: 17 QGHKKKVHSVAWNSN-GTKLASGSVDQTARIWNI-EPHGHSKAKDLELKGHTDSVDQLCW 74
Query: 287 S-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
+ + S DK++RLWD +GK T++ E +++ ++ + D + G+RD +
Sbjct: 75 DPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENI-NITYKPDGTHVAVGNRDDELT 133
Query: 464 L 466
+
Sbjct: 134 I 134
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR----RFEDHTKDVLSVAFSVD 421
GH + V +S+G SGS D+T R+W++ ++ + HT V + +
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPK 77
Query: 422 NRQIV-SGSRDKTIKLWN 472
+ +V + S DK+++LW+
Sbjct: 78 HSDLVATASGDKSVRLWD 95
Score = 36.3 bits (80), Expect = 0.011
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +2
Query: 365 TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+R ++ H K V SVA++ + ++ SGS D+T ++WN
Sbjct: 13 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWN 48
Score = 36.3 bits (80), Expect = 0.011
Identities = 23/90 (25%), Positives = 42/90 (46%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
L+GH V Q+ +PK+ D++ ++S DK++ +W + Q L G + ++
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDA---RSGKCTQQVELSGEN---INIT 115
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRR 373
DG + G+ D L + D+ K R
Sbjct: 116 YKPDGTHVAVGNRDDELTILDVRKFKPLHR 145
Score = 34.3 bits (75), Expect = 0.043
Identities = 21/79 (26%), Positives = 32/79 (40%)
Frame = +2
Query: 236 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 415
P L H+ + + G Y GS D + LWD++ R F V +++F+
Sbjct: 183 PLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFN 242
Query: 416 VDNRQIVSGSRDKTIKLWN 472
I S S D I + N
Sbjct: 243 YSGEYIASASEDLFIDIAN 261
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 44.0 bits (99), Expect = 5e-05
Identities = 26/86 (30%), Positives = 38/86 (44%)
Frame = +2
Query: 215 DENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 394
D N P GH +S V S+ A S S D TLRLWD+ R F HT +
Sbjct: 534 DLRNISQPLHVFSGHKKAVSYVKFLSNNELA-SASTDSTLRLWDVKDNLPVRTFRGHTNE 592
Query: 395 VLSVAFSVDNRQIVSGSRDKTIKLWN 472
V +V++ + GS + +++
Sbjct: 593 KNFVGLTVNSEYLACGSETNEVYVYH 618
Score = 41.1 bits (92), Expect = 4e-04
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 299 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 475
N+ S ++ + +WD+ ++ +E+H K SV FS + +VSGS D +K+W T
Sbjct: 434 NHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCT 493
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 44.0 bits (99), Expect = 5e-05
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
GH+ V +A +P PD ++S+S+D + L E I GH +
Sbjct: 9 GHSRPVVDVAYSPVTPDGFFLISASKDSNPM---LRNGETGDWIGT--FEGHKGAVWSCS 63
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
L + A S S D T ++W+ G FE H V + AFS D ++++G +K ++
Sbjct: 64 LDKNAIRAASASADFTAKIWNALTGDELHSFE-HKHIVRACAFSEDTHRLLTGGMEKILR 122
Query: 464 LWN 472
+++
Sbjct: 123 IFD 125
Score = 36.7 bits (81), Expect = 0.008
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +2
Query: 251 YGHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 421
+GHS + DV S DG + +S S D L + G FE H V S + +
Sbjct: 8 HGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKN 67
Query: 422 NRQIVSGSRDKTIKLWN 472
+ S S D T K+WN
Sbjct: 68 AIRAASASADFTAKIWN 84
Score = 30.7 bits (66), Expect = 0.53
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +2
Query: 296 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
GN ++G D + +D G+ + H V V ++ SGS D T+++W
Sbjct: 235 GNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 43.6 bits (98), Expect = 7e-05
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +2
Query: 236 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK--DVLSVA 409
P L GH H + DV + +GS D LR+WD + H++ VL+VA
Sbjct: 9 PVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVA 68
Query: 410 FS--VDNRQIVSGSRDKTIKLWN 472
S + +I+S RD T+K W+
Sbjct: 69 ASPWLGEDKIISQGRDGTVKCWD 91
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/101 (22%), Positives = 44/101 (43%)
Frame = +2
Query: 167 LSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 346
+S D ++++ L + I +K + +S + DG A + WD +R+++
Sbjct: 278 ISGGADDKIVMYNLNHSTGSCTI-RKEITLERPGVSGTSIRVDGKIAATAGWDHRIRVYN 336
Query: 347 LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
G + H +V++S D + S S D T+ LW
Sbjct: 337 YRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALW 377
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 43.6 bits (98), Expect = 7e-05
Identities = 24/85 (28%), Positives = 45/85 (52%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
TL GH ++ + + +YP I+S+S D+T+ +W + + L GH+H++
Sbjct: 88 TLLGHLDYIRTVQFHHEYP-WIVSASDDQTIRIWNW-QSRTCVSV----LTGHNHYVMCA 141
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAA 355
+ +S S D+T+R+WD+ A
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGA 166
Score = 41.9 bits (94), Expect = 2e-04
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 427
L GH +I V + + +S S D+T+R+W+ + H V+ +F
Sbjct: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKED 148
Query: 428 QIVSGSRDKTIKLWN 472
+VS S D+T+++W+
Sbjct: 149 LVVSASLDQTVRVWD 163
Score = 41.9 bits (94), Expect = 2e-04
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 24/147 (16%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW-----------------KLTRDENN-Y 229
L GHN +V + +PK D+++S+S D+T+ VW +LT+ ++ +
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLF 189
Query: 230 G----IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR--RFEDHTK 391
G I + L GH ++ +SG+ D+ ++LW + K H
Sbjct: 190 GGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMN 249
Query: 392 DVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+V SV F IVS S DK+I++W+
Sbjct: 250 NVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 332 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
++LWD G RF++H V V F VSG D IK+WN
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWN 79
Score = 33.5 bits (73), Expect = 0.075
Identities = 28/116 (24%), Positives = 49/116 (42%)
Frame = +2
Query: 125 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 304
V ++ +PK P IL+S + +W + G R H + V +
Sbjct: 12 VKGLSFHPKRP-WILASLHSGVIQLW-----DYRMGTLIDRFDEHEGPVRGVHFHNSQPL 65
Query: 305 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+SG D +++W+ + H + +V F + IVS S D+TI++WN
Sbjct: 66 FVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
Score = 33.5 bits (73), Expect = 0.075
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 71 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 214
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 43.2 bits (97), Expect = 9e-05
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 209 TRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 388
T EN + H + I D+ + L+ S D+T+++WD+ K T HT
Sbjct: 111 THQENTEKARFRDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHT 170
Query: 389 KDVLSVAFSVDNRQ-IVSGSRDKTIKLWN 472
V S+ N +VSGSRD LW+
Sbjct: 171 GTVKSMCSHPTNSDLLVSGSRDGCFALWD 199
Score = 35.9 bits (79), Expect = 0.014
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 208
E K G L GH G V + ++P D+++S SRD +W L
Sbjct: 158 EENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 35.9 bits (79), Expect = 0.014
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2
Query: 266 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDN-RQIVS 439
F ++S DG Y LSGS D +W + + + H +V +V +S ++ +
Sbjct: 340 FFVRTMISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVAT 399
Query: 440 GSRDKTIKLWN 472
S D T++LWN
Sbjct: 400 ASDDFTVRLWN 410
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRL 340
+L++S D+T+ VW + ++ G+ L GH+ + + ++ + +SGS D L
Sbjct: 143 LLTASGDQTIKVWDVEENKCT-GV----LIGHTGTVKSMCSHPTNSDLLVSGSRDGCFAL 197
Query: 341 WDLAAGKTTRRFE 379
WDL ++ + E
Sbjct: 198 WDLRCKSSSHKEE 210
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +2
Query: 302 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
Y+ WD +LRL L K R F+ H V+S++ +SGS D+T+ LW+
Sbjct: 92 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWD 148
Score = 30.3 bits (65), Expect = 0.70
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 152 YPDMILSSSR---DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSW 322
+P ++ SSR D +L + L+ +N Y + GH + + L S G +SGS
Sbjct: 86 HPTTVIYSSRNGWDDSLRL--LSLHDNKY---LRYFKGHHDRVVSLSLCSGGECFISGSL 140
Query: 323 DKTLRLWD 346
D+T+ LWD
Sbjct: 141 DRTVLLWD 148
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +2
Query: 275 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 451
D S +G + +SGS D + W + +GK + + + + + V+GS +
Sbjct: 255 DAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGSPMFVTGSSE 313
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +2
Query: 302 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
Y+ WD +LRL L K R F+ H V+S++ +SGS D+T+ LW+
Sbjct: 89 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWD 145
Score = 30.3 bits (65), Expect = 0.70
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 152 YPDMILSSSR---DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSW 322
+P ++ SSR D +L + L+ +N Y + GH + + L S G +SGS
Sbjct: 83 HPTTVIYSSRNGWDDSLRL--LSLHDNKY---LRYFKGHHDRVVSLSLCSGGECFISGSL 137
Query: 323 DKTLRLWD 346
D+T+ LWD
Sbjct: 138 DRTVLLWD 145
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +2
Query: 275 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 451
D S +G + +SGS D + W + +GK + + + + + V+GS +
Sbjct: 252 DAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGSPMFVTGSSE 310
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 42.7 bits (96), Expect = 1e-04
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +2
Query: 239 QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSVAF- 412
++ L GH ++ + +S+G+ +SGS D + +W+ ++ K + HT ++ F
Sbjct: 43 EQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFV 102
Query: 413 -SVDNRQIVSGSRDKTIKLWNT 475
+ +VSG+ D ++L+NT
Sbjct: 103 PETSDELVVSGAGDAEVRLFNT 124
Score = 29.1 bits (62), Expect = 1.6
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 5/85 (5%)
Frame = +2
Query: 233 IPQKRLY-GHSHFISDV----VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 397
I KR Y GH + +D+ L G Y SGS D +W+ G+ + +
Sbjct: 607 IDMKRRYVGHCNVGTDIKQASFLGQRGEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVL 666
Query: 398 LSVAFSVDNRQIVSGSRDKTIKLWN 472
+ + + + D TIK+W+
Sbjct: 667 NCIQCHPFDSVVATSGIDNTIKIWS 691
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 42.7 bits (96), Expect = 1e-04
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 323 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
D +RL+D+ K R F HT + + FS D + ++S S D ++++W+
Sbjct: 536 DFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWD 585
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 361
GH+ I+D+ S DG + +S S D +LR+WD+ K
Sbjct: 555 GHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAK 590
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 42.3 bits (95), Expect = 2e-04
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD----VLSVAFSVD 421
GHS ++ VV S + L+GS D T R+WD GK + K V S+A
Sbjct: 199 GHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGS 258
Query: 422 NRQIVSGSRDKTIKLWN 472
+V G + K + LWN
Sbjct: 259 ESWLVCG-QGKNLALWN 274
Score = 35.1 bits (77), Expect = 0.024
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 323 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
D WD+ +GK F+ H+ + +V QI++GS D T ++W+
Sbjct: 180 DSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWD 229
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 436
HS +S + L+ D S SWD+T+++W + K + H V SV + +
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV--TTAESLVF 191
Query: 437 SGSRDKTIKLW 469
+GS D T+K+W
Sbjct: 192 TGSADGTVKVW 202
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 41.9 bits (94), Expect = 2e-04
Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
T+ GH +A N + ++ S SRD+ ++ + R ++++ +L GH + +
Sbjct: 252 TMGGHQTRTGVLAWNSR---ILSSGSRDRNILQHDI-RVQSDF---VSKLVGHKSEVCGL 304
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS---GSRD 451
S D SG D L +W+ + + + +HT V ++ +S +++ G+ D
Sbjct: 305 KWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTAD 364
Query: 452 KTIKLWNT 475
+ I+ WNT
Sbjct: 365 RCIRFWNT 372
Score = 34.7 bits (76), Expect = 0.032
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 332 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+ LW + H+ VL +A S D + IV+G+ D+T++ WN
Sbjct: 410 IMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWN 456
Score = 30.7 bits (66), Expect = 0.53
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 349
L GHS + + S DG ++G+ D+TLR W++
Sbjct: 424 LTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 41.9 bits (94), Expect = 2e-04
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
GH+ V + +P PD ++S+S+D + L E I GH +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSQPM---LRNGETGDWIGT--FEGHKGAVWSSC 68
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
L ++ A S S D + +LWD G FE H V + AFS D + +++G +K ++
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSQDTKYLITGGFEKILR 127
Query: 464 LWN 472
+++
Sbjct: 128 VFD 130
Score = 39.9 bits (89), Expect = 9e-04
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +2
Query: 215 DENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 391
D N++G+ + Y I L GN ++G D +RL+D GK + H
Sbjct: 214 DANHFGLVKS--YDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHG 271
Query: 392 DVLSVAFSVDNRQIVSGSRDKTIKLWNT 475
V V F+ SGS D TI++W T
Sbjct: 272 PVHCVRFAPTGESYASGSEDGTIRIWQT 299
Score = 31.1 bits (67), Expect = 0.40
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +2
Query: 251 YGHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 421
+GHS + D+ S DG + +S S D L + G FE H V S +
Sbjct: 13 HGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNN 72
Query: 422 NRQIVSGSRDKTIKLWN 472
+ S S D + KLW+
Sbjct: 73 ALRAASASADFSAKLWD 89
Score = 30.3 bits (65), Expect = 0.70
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 332 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 41.5 bits (93), Expect = 3e-04
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTT----RRFEDHTKDVLSVAFS 415
GH+ + + S G SG D + +WD +A+ +T R E+HT V ++A+
Sbjct: 264 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWC 323
Query: 416 VDNRQIVS---GSRDKTIKLWNT 475
+++ G D+TIK WNT
Sbjct: 324 PFQANLLATGGGGGDRTIKFWNT 346
Score = 31.9 bits (69), Expect = 0.23
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 314 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
G L LW + HT VL +A S D + S + D+T++ WN
Sbjct: 378 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 430
Score = 29.5 bits (63), Expect = 1.2
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +2
Query: 374 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+ HT++V + +S +Q+ SG D + +W+
Sbjct: 262 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 294
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 233 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 349
+ L GH+ + + S DG S + D+TLR W++
Sbjct: 393 VKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 41.5 bits (93), Expect = 3e-04
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTT----RRFEDHTKDVLSVAFS 415
GH+ + + S G SG D + +WD +A+ +T R E+HT V ++A+
Sbjct: 254 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWC 313
Query: 416 VDNRQIVS---GSRDKTIKLWNT 475
+++ G D+TIK WNT
Sbjct: 314 PFQANLLATGGGGGDRTIKFWNT 336
Score = 31.9 bits (69), Expect = 0.23
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 314 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
G L LW + HT VL +A S D + S + D+T++ WN
Sbjct: 368 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 420
Score = 29.5 bits (63), Expect = 1.2
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +2
Query: 374 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+ HT++V + +S +Q+ SG D + +W+
Sbjct: 252 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 284
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 233 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 349
+ L GH+ + + S DG S + D+TLR W++
Sbjct: 383 VKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 299 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 466
N S S DK +++WD+A G E HTK+V +VA++ ++SGS D+T+ L
Sbjct: 247 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVL 303
Score = 37.9 bits (84), Expect = 0.003
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 280
T+ GH+ T ++ N P+++ + S+D+T+ +W L+ +E + G FI+
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIA-- 421
Query: 281 VLSSDGNYALS-GSWDKTLRLWD 346
S D + L+ G L+LWD
Sbjct: 422 -FSPDNPFLLAMGGVMGELKLWD 443
Score = 35.5 bits (78), Expect = 0.019
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +2
Query: 236 PQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSV 406
P + GH + V + S N +GS D+T++LWDL+ + + + + +
Sbjct: 361 PSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFI 420
Query: 407 AFSVDNRQIVS-GSRDKTIKLWNT 475
AFS DN +++ G +KLW+T
Sbjct: 421 AFSPDNPFLLAMGGVMGELKLWDT 444
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 41.1 bits (92), Expect = 4e-04
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +2
Query: 242 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFS- 415
K+L H ++ V ++DG+ LSGS D+ + LWD F+ H ++ F
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMP 108
Query: 416 -VDNRQIVSGSRDKTIK 463
D+R IV+ + DK ++
Sbjct: 109 FSDDRTIVTSAADKQVR 125
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 368 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
++ + H V +V+F+ D ++SGS D+ + LW+
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWD 83
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 41.1 bits (92), Expect = 4e-04
Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 7/133 (5%)
Frame = +2
Query: 95 RGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS 274
RG GH V +A P S D L++W + +K H +
Sbjct: 274 RGIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVD 333
Query: 275 DVVLSSDGNYALSGSWDKTLRLWDL------AAGKTTRRFEDHTKDVLSVAFSVDNRQIV 436
D N L+GS D T+R++D G +FE H VL V +S D +
Sbjct: 334 --WNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVF 391
Query: 437 -SGSRDKTIKLWN 472
S + D + +W+
Sbjct: 392 GSSAEDGLLNIWD 404
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Frame = +2
Query: 113 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY---GIPQKR----LYGHSHFI 271
H G V +I P+ ++ + + +++W + Y G P R L GH
Sbjct: 152 HPGEVNRIRELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDA 211
Query: 272 S-DVVLSSDGNYALSGSWDKTLRLWDL 349
+ + + LSG DK++ LW++
Sbjct: 212 EFALAMCPTEPFVLSGGKDKSVILWNI 238
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 41.1 bits (92), Expect = 4e-04
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
GH+ V + +P PD ++S+S+D + L E I GH +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPM---LRNGETGDWIGT--FEGHKGAVWSSC 68
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
L ++ A S S D + +LWD G FE H V + AFS D + +++G +K ++
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTKSLLTGGFEKILR 127
Query: 464 LWN 472
+++
Sbjct: 128 VFD 130
Score = 33.9 bits (74), Expect = 0.057
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 215 DENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 391
D N++G+ + Y I L G ++G D +R++D G+ + H
Sbjct: 214 DANHFGLVKS--YDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHG 271
Query: 392 DVLSVAFSVDNRQIVSGSRDKTIKLWNT 475
V V F+ SGS D TI++W T
Sbjct: 272 PVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 31.5 bits (68), Expect = 0.30
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +2
Query: 233 IPQKRLYGHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 403
IPQ +GHS + D+ S DG + +S S D L + G FE H V S
Sbjct: 8 IPQV-CHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWS 66
Query: 404 VAFSVDNRQIVSGSRDKTIKLWN 472
+ + S S D + KLW+
Sbjct: 67 SCLDNNALRAASASADFSAKLWD 89
Score = 30.3 bits (65), Expect = 0.70
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 332 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 41.1 bits (92), Expect = 4e-04
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPD--MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
GH+ V + +P PD ++S+S+D + L E I GH +
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSHPM---LRNGETGDWIGT--FEGHKGAVWSSC 68
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
L ++ A S S D + +LWD G FE H V + AFS D + +++G +K ++
Sbjct: 69 LDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTKSLLTGGFEKILR 127
Query: 464 LWN 472
+++
Sbjct: 128 VFD 130
Score = 33.9 bits (74), Expect = 0.057
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 215 DENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 391
D N++G+ + Y I L G ++G D +R++D G+ + H
Sbjct: 214 DANHFGLVKS--YDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHG 271
Query: 392 DVLSVAFSVDNRQIVSGSRDKTIKLWNT 475
V V F+ SGS D TI++W T
Sbjct: 272 PVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 31.5 bits (68), Expect = 0.30
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +2
Query: 233 IPQKRLYGHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 403
IPQ +GHS + D+ S DG + +S S D L + G FE H V S
Sbjct: 8 IPQV-CHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWS 66
Query: 404 VAFSVDNRQIVSGSRDKTIKLWN 472
+ + S S D + KLW+
Sbjct: 67 SCLDNNALRAASASADFSAKLWD 89
Score = 30.3 bits (65), Expect = 0.70
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 332 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 40.7 bits (91), Expect = 5e-04
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 299 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTI 460
N S S DK +++WD+A G E HTK+V +VA++ ++SGS D+T+
Sbjct: 279 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTV 333
Score = 35.9 bits (79), Expect = 0.014
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +2
Query: 290 SDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTI 460
S N +GS DK+++LWDL+ + + + + V S++F+VDN +++ G +
Sbjct: 415 STPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGEL 474
Query: 461 KLWNT 475
+W+T
Sbjct: 475 HVWDT 479
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +2
Query: 125 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 220
V+ I+ N P+++ + S DK++ +W L+ +E
Sbjct: 407 VSSISYNISTPNLLATGSMDKSVKLWDLSNNE 438
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 40.3 bits (90), Expect = 7e-04
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +2
Query: 242 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 421
KRL+ H S L+ SGSWDKTL++W L+ K + H D ++ + D
Sbjct: 167 KRLW-IEHADSISCLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAH-DDAINGLVAGD 224
Query: 422 NRQIVSGSRDKTIKLW 469
R + S S D +K+W
Sbjct: 225 GR-VYSASADGKVKIW 239
Score = 32.3 bits (70), Expect = 0.17
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Frame = +2
Query: 269 ISDVVLSSDGNYALSGS-------WDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 427
++ VV+S DGN+ G W+K + D + H VL + V
Sbjct: 272 VNSVVVSGDGNWVYGGGSDGFVIGWEKKEKEGDFEEWRLGFETRGHNMAVLCMC--VVGE 329
Query: 428 QIVSGSRDKTIKLW 469
+ SGS DK+I LW
Sbjct: 330 MVCSGSADKSIGLW 343
Score = 27.5 bits (58), Expect = 4.9
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Frame = +2
Query: 80 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 259
E +L RGHN V + +M+ S S DK++ +W+ R+ ++GH
Sbjct: 306 EEWRLGFETRGHNMAVLCMCV---VGEMVCSGSADKSIGLWR--REVTGMLCKFGVIHGH 360
Query: 260 SHFISDVVLSSD----GNYALSGSWDKTLRLW 343
+ + S + G SG DK+LR+W
Sbjct: 361 EGPVKCLQASPNNVGAGFMLYSGGLDKSLRVW 392
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +2
Query: 98 GTLRGHNGWVTQIATNPKYPD---MILSSSRDKTLIVWKLTRDEN 223
G + GH G V + +P M+ S DK+L VW + + +N
Sbjct: 355 GVIHGHEGPVKCLQASPNNVGAGFMLYSGGLDKSLRVWWVPKQDN 399
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 39.9 bits (89), Expect = 9e-04
Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Frame = +2
Query: 158 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG-----HSHFISDVVLSSDGNYALSGSW 322
D++++SS D +L ++ + + I + +G +H S ++ SS N +G
Sbjct: 37 DLLVTSSEDDSLRLFDIA-NAKQLKITYHKKHGTDRVCFTHHPSSLICSSRYNLESTGES 95
Query: 323 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+ L ++D + R F+ H V+S+ S N +SGS D++++LW+
Sbjct: 96 LRYLSMYD---NRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWD 142
Score = 33.5 bits (73), Expect = 0.075
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNR 427
G + ++D+ S+DG L + + + + D G+ F E + F+ D +
Sbjct: 198 GDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFTPDGK 257
Query: 428 QIVSGSRDKTIKLWN 472
++SGS D T+ WN
Sbjct: 258 YVLSGSGDGTLHAWN 272
Score = 32.3 bits (70), Expect = 0.17
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 275 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 445
+ + DG Y LSGS D TL W++ R+E++ V + ++ V+ S
Sbjct: 249 EATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVAAS 305
Score = 30.3 bits (65), Expect = 0.70
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 152 YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY-GHSHFISDVVLSSDGNYALSGSWDK 328
+P ++ SSR + R + Y R + GH + + +S + +SGS D+
Sbjct: 77 HPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDR 136
Query: 329 TLRLWDL 349
++RLWDL
Sbjct: 137 SVRLWDL 143
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 39.9 bits (89), Expect = 9e-04
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--ED-HTKDVLSVAFSVDNR 427
HS+F++ + S DG ++ S DK ++D G ED H + +V++S D++
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 428 QIVSGSRDKTIKLW 469
++++ S DK+ K+W
Sbjct: 110 RVLTVSADKSAKVW 123
Score = 29.9 bits (64), Expect = 0.92
Identities = 26/92 (28%), Positives = 39/92 (42%)
Frame = +2
Query: 89 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 268
K + R H+ +V I +P I SS K +I T D+ + GH
Sbjct: 42 KFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASED---GHKGS 98
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKT 364
I V S D L+ S DK+ ++W++A T
Sbjct: 99 IYAVSWSPDSKRVLTVSADKSAKVWEVAEDGT 130
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 39.9 bits (89), Expect = 9e-04
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 311 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWN 472
S +++ +++WD+A + ++H K V S+ + S D + SGS D ++KLW+
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWS 605
Score = 35.9 bits (79), Expect = 0.014
Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
++ H V I + P ++ S S D ++ +W + N G+ + ++
Sbjct: 572 MKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSI-----NQGVSIGTIKTKANICCVQF 626
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
S G GS D + +DL K H K V V F VD+ +VS S D T+
Sbjct: 627 PSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSSTDNTL 685
Query: 461 KLWN 472
KLW+
Sbjct: 686 KLWD 689
Score = 29.9 bits (64), Expect = 0.92
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFISD 277
T+ GH+ V+ + ++SSS D TL +W L+ + P GH++ +
Sbjct: 657 TMIGHHKTVSYVRFVDS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 714
Query: 278 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 439
V LS Y +GS + ++ A ++ T D +S D Q +S
Sbjct: 715 VGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQFIS 768
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 39.9 bits (89), Expect = 9e-04
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 311 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWN 472
S +++ +++WD+A + ++H K V S+ + S D + SGS D ++KLW+
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWS 605
Score = 35.9 bits (79), Expect = 0.014
Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
++ H V I + P ++ S S D ++ +W + N G+ + ++
Sbjct: 572 MKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSI-----NQGVSIGTIKTKANICCVQF 626
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
S G GS D + +DL K H K V V F VD+ +VS S D T+
Sbjct: 627 PSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSSTDNTL 685
Query: 461 KLWN 472
KLW+
Sbjct: 686 KLWD 689
Score = 29.9 bits (64), Expect = 0.92
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFISD 277
T+ GH+ V+ + ++SSS D TL +W L+ + P GH++ +
Sbjct: 657 TMIGHHKTVSYVRFVDS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 714
Query: 278 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 439
V LS Y +GS + ++ A ++ T D +S D Q +S
Sbjct: 715 VGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQFIS 768
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 39.1 bits (87), Expect = 0.002
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR--DE------NNYGIPQKRLY-- 253
L H G V Q+ +P + ++ SS D+ L+VW + R DE + P + L+
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH 360
Query: 254 -GHSHFISDVVLSSDGNYALSG-SWDKTLRLWDLAAGKTTRRFEDHTKD 394
GH ISD + D + +S + D +L++W +A ED D
Sbjct: 361 GGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDEDEDDD 409
Score = 35.5 bits (78), Expect = 0.019
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = +2
Query: 236 PQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTR------RFEDHTKD 394
P RL GH + SS Y LSGS D+ + LWD++A T + +E H
Sbjct: 161 PDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSI 220
Query: 395 VLSVAFSVDNRQIV-SGSRDKTIKLWN 472
+ VA+ + N I S D + +W+
Sbjct: 221 IEDVAWHMKNENIFGSAGDDCQLVIWD 247
Score = 29.9 bits (64), Expect = 0.92
Identities = 25/124 (20%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 289
GH + +A + K ++ S+ D L++W L ++ Q ++ H I+ + +
Sbjct: 216 GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQ-----MQHQVKVHEREINYLSFN 270
Query: 290 SDGNYAL-SGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS-RDKTI 460
+ L + S D T+ L+DL H +V V + ++ +++ S D+ +
Sbjct: 271 PFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRL 330
Query: 461 KLWN 472
+W+
Sbjct: 331 MVWD 334
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 39.1 bits (87), Expect = 0.002
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Frame = +2
Query: 98 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 277
G GH+ V A P P I++ D +V + + + HS+F++
Sbjct: 138 GEFDGHSRRVLSCAIKPTRPFRIVTCGED--FLVNFYEGPPFKFKLSSRE---HSNFVNC 192
Query: 278 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF------EDHTKDVLSVAFSVDNRQIVS 439
V + DG+ ++ S DK ++D GKT + H + +V++S D +Q+++
Sbjct: 193 VRFAPDGSKFITVSSDKKGIIYD---GKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLT 249
Query: 440 GSRDKTIKLWN 472
S DK+ K+W+
Sbjct: 250 VSADKSAKIWD 260
Score = 29.5 bits (63), Expect = 1.2
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 254 GHSHFISDV-VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 430
GH +S + VL + +Y LSGS+D + W L G + T++ F+ +
Sbjct: 322 GHMKNVSSLAVLKGNADYILSGSYDGLICKWMLGRGFCGKL--QRTQNSQIKCFAAHEEE 379
Query: 431 IVSGSRDKTI 460
IV+ D I
Sbjct: 380 IVTSGYDNKI 389
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA 352
GH I V S DG L+ S DK+ ++WD++
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDIS 262
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +2
Query: 242 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA-GKTTRRFEDH--TKDVLSVAF 412
+R+ I+ + +S DG + + + + LWDLA K +F H +K V+ F
Sbjct: 391 ERVISEEQPITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCF 450
Query: 413 -SVDNRQIVSGSRDKTIKLWN 472
+D+ I SGS D + +WN
Sbjct: 451 GGLDSSFIASGSEDSQVYIWN 471
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 293 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKLW 469
D ++ SGS D + +W+L K H+ V V+++ N R + S S D+TI++W
Sbjct: 454 DSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 34.3 bits (75), Expect = 0.043
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 202
L GH+ V ++ NPK P M+ S+S D+T+ +W
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 32.7 bits (71), Expect = 0.13
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR---RFEDHTKDVLSVAFSV 418
L H + + V S+ G Y + S D T +W + E H V V++S
Sbjct: 220 LVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSP 279
Query: 419 DNRQIVSGSRDKTIKLWN 472
D+ ++++ + +KLW+
Sbjct: 280 DDTKLLTCGNAEVLKLWD 297
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHTKDVLSVAFS 415
GH+ + + S G SG D + +WD LA+ TR RFE+HT V ++A+
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWC 293
Query: 416 VDNRQIVS---GSRDKTIKLWNT 475
+++ G D I WNT
Sbjct: 294 PFQASLLATGGGVGDGKINFWNT 316
Score = 33.9 bits (74), Expect = 0.057
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 314 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
G L LW + HT VL +A S D + S + D+T++LWN
Sbjct: 348 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWN 400
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 233 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRR 373
+ L GH+ + + S DG S + D+TLRLW++ KTT++
Sbjct: 363 VKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 411
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAAGKTTR----RFEDHTKDVLSVAF 412
GH+ + + S G SG D + +WD +A+ TR RFE+HT V ++A+
Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAW 275
Query: 413 SVDNRQIVS---GSRDKTIKLWNT 475
+++ G D IK WNT
Sbjct: 276 CPFQASLLATGGGVGDGKIKFWNT 299
Score = 33.9 bits (74), Expect = 0.057
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 314 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
G L LW + HT VL +A S D + S + D+T++LWN
Sbjct: 331 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWN 383
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 233 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRR 373
+ L GH+ + + S DG S + D+TLRLW++ KTT++
Sbjct: 346 VKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 394
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 38.3 bits (85), Expect = 0.003
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 19/91 (20%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR--------------RFED---- 382
H H ++ V LS D + S S D T+ WD+++GK+ +F++
Sbjct: 144 HQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGKSDEYKWPSDEVLKSHGLKFQESWYT 203
Query: 383 -HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
H K L++A S D R + +G D + LW+
Sbjct: 204 RHNKQSLALAVSSDGRYLATGGVDCHVHLWD 234
Score = 34.3 bits (75), Expect = 0.043
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 433
GH +S + SGS+D TL +W+ H ++LS+ ++ ++
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSID-ALGRERV 319
Query: 434 VSGSRDKTIKLW 469
+S RD+T++L+
Sbjct: 320 LSVGRDRTMQLY 331
Score = 33.1 bits (72), Expect = 0.099
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 15/80 (18%)
Frame = +2
Query: 278 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTR---------------RFEDHTKDVLSVAF 412
+ +SSDG Y +G D + LWD+ + + F H V S+ F
Sbjct: 212 LAVSSDGRYLATGGVDCHVHLWDIRTREHVQVNKLKNNQVKDSVHCAFTGHCGIVSSLCF 271
Query: 413 SVDNRQIVSGSRDKTIKLWN 472
++ SGS D T+ +WN
Sbjct: 272 REGTAELFSGSYDGTLSIWN 291
Score = 28.3 bits (60), Expect = 2.8
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2
Query: 332 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
LR+ DL + R H V VA S D+ + S S+D TI W+
Sbjct: 127 LRVQDLQSSDKFRVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWD 173
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 38.3 bits (85), Expect = 0.003
Identities = 34/149 (22%), Positives = 73/149 (48%), Gaps = 8/149 (5%)
Frame = +2
Query: 53 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--N 226
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + + N
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIIN 210
Query: 227 YGIPQKR----LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTK 391
+ +R L + + + ++++SD + + TL+LWD+ R F H +
Sbjct: 211 FADSVRRRCSVLQWNPNVTTQIMVASDDDSS------PTLKLWDMRNIMSPVREFTGHQR 264
Query: 392 DVLSVAF-SVDNRQIVSGSRDKTIKLWNT 475
V+++ + D+ +++ ++D W+T
Sbjct: 265 GVIAMEWCPSDSSYLLTCAKDNRTICWDT 293
Score = 29.9 bits (64), Expect = 0.92
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 8/135 (5%)
Frame = +2
Query: 92 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS--H 265
L G L H G V + N +++ S + D + +W L + P + G +
Sbjct: 114 LVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQG 173
Query: 266 FISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN--RQIV 436
IS + + L S S++ T +WDL K F D + SV N QI+
Sbjct: 174 EISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIM 233
Query: 437 SGSRD---KTIKLWN 472
S D T+KLW+
Sbjct: 234 VASDDDSSPTLKLWD 248
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 38.3 bits (85), Expect = 0.003
Identities = 34/149 (22%), Positives = 73/149 (48%), Gaps = 8/149 (5%)
Frame = +2
Query: 53 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--N 226
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + + N
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIIN 210
Query: 227 YGIPQKR----LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTK 391
+ +R L + + + ++++SD + + TL+LWD+ R F H +
Sbjct: 211 FADSVRRRCSVLQWNPNVTTQIMVASDDDSS------PTLKLWDMRNIMSPVREFTGHQR 264
Query: 392 DVLSVAF-SVDNRQIVSGSRDKTIKLWNT 475
V+++ + D+ +++ ++D W+T
Sbjct: 265 GVIAMEWCPSDSSYLLTCAKDNRTICWDT 293
Score = 29.9 bits (64), Expect = 0.92
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 8/135 (5%)
Frame = +2
Query: 92 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS--H 265
L G L H G V + N +++ S + D + +W L + P + G +
Sbjct: 114 LVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQG 173
Query: 266 FISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN--RQIV 436
IS + + L S S++ T +WDL K F D + SV N QI+
Sbjct: 174 EISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIM 233
Query: 437 SGSRD---KTIKLWN 472
S D T+KLW+
Sbjct: 234 VASDDDSSPTLKLWD 248
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +2
Query: 245 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAF--S 415
+L GH ++ V +S G+ +SGS D+ + LW+ +G + H ++V F
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPF 109
Query: 416 VDNRQIVSGSRDKTIKL 466
D+R I++ D ++L
Sbjct: 110 TDDRTIITSGADGQVRL 126
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 371 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+ H V +V F+ +VSGS D+ I LWN
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWN 83
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 37.9 bits (84), Expect = 0.003
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
L GH +V +P M+++ S D T+ VW +N+ I + H + DVV
Sbjct: 174 LLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNW-IAE---INHGLPVEDVV 229
Query: 284 -LSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSV 406
L S G A +G ++++WDL GK E H K V S+
Sbjct: 230 YLPSGGLIATAGG--NSVKVWDLIGGGKMVCSMESHNKTVTSL 270
Score = 31.9 bits (69), Expect = 0.23
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 293 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLW 469
D + +SG D ++ WD+A H V S V++ +V+GS D T+K+W
Sbjct: 147 DKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVW 206
Query: 470 N 472
+
Sbjct: 207 D 207
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 37.9 bits (84), Expect = 0.003
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR-DENNYGI-------PQKRLY-- 253
+ H G V Q+ +P + ++ SS D+ L+VW L R E I P + L+
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSH 359
Query: 254 -GHSHFISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDV 397
GH ISD + + + + S + D +L++W +A ++ R E+ +D+
Sbjct: 360 GGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMA--ESIYRDEEDAEDI 407
Score = 32.3 bits (70), Expect = 0.17
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Frame = +2
Query: 236 PQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTR------RFEDHTKD 394
P RL GH + S Y LSGS D+ + LWD++A + +E H
Sbjct: 160 PDLRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESA 219
Query: 395 VLSVAFSVDNRQIV-SGSRDKTIKLWNT 475
+ V++ + N + S D + +W+T
Sbjct: 220 IADVSWHMKNENLFGSAGEDGRLVIWDT 247
Score = 29.5 bits (63), Expect = 1.2
Identities = 22/124 (17%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 289
GH + ++ + K ++ S+ D L++W ++ Q ++ H ++ + +
Sbjct: 215 GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQ-----MQHQVKVHEREVNYLSFN 269
Query: 290 SDGNYAL-SGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS-RDKTI 460
+ L + S D T+ L+DL H +V V + ++ +++ S D+ +
Sbjct: 270 PFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRL 329
Query: 461 KLWN 472
+W+
Sbjct: 330 MVWD 333
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 37.9 bits (84), Expect = 0.003
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIK 463
SSDG S D T+++ D GK + H + V F + +IV SGS D ++
Sbjct: 112 SSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVR 171
Query: 464 LWN 472
LWN
Sbjct: 172 LWN 174
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 311 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
SGS D +RLW+ G+ R D + + S+AF + S K + +W+
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 37.9 bits (84), Expect = 0.003
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIK 463
SSDG S D T+++ D GK + H + V F + +IV SGS D ++
Sbjct: 112 SSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVR 171
Query: 464 LWN 472
LWN
Sbjct: 172 LWN 174
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 311 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
SGS D +RLW+ G+ R D + + S+AF + S K + +W+
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 37.5 bits (83), Expect = 0.005
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 242 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFS- 415
K+L H ++ V +++G+ +SGS D+ + LWD G F H +V F
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMP 112
Query: 416 -VDNRQIVSGSRDKTIK 463
D+R IV+ + D ++
Sbjct: 113 FSDDRTIVTCAADGMVR 129
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 368 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
++ E H V +V+F+ + ++SGS D+ + LW+
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWD 87
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 37.1 bits (82), Expect = 0.006
Identities = 18/76 (23%), Positives = 35/76 (46%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 427
LYGH+ + V L + + +D +R+WD+ G + + + ++A D +
Sbjct: 158 LYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALA--ADTK 215
Query: 428 QIVSGSRDKTIKLWNT 475
+V+G D I W +
Sbjct: 216 LLVAGGTDGFIHCWKS 231
Score = 34.3 bits (75), Expect = 0.043
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 245 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 370
RL+GH I+ + L D SGSWD ++R+WD ++ K +
Sbjct: 252 RLWGHEGPITSLAL--DMTSIFSGSWDMSVRIWDRSSMKCVK 291
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 37.1 bits (82), Expect = 0.006
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +2
Query: 290 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
S+ + +GS D T++ W L G H K V+S V N + SGS D T++LW
Sbjct: 595 SEYGHVYTGSGDNTIKAWSLQDGSLLCTMSGH-KSVVSTLVVV-NGVLYSGSWDGTVRLW 652
Query: 470 N 472
+
Sbjct: 653 S 653
Score = 33.9 bits (74), Expect = 0.057
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 343
+ + S D T+ W L +D G + GH +S +V+ + Y SGSWD T+RLW
Sbjct: 600 VYTGSGDNTIKAWSL-QD----GSLLCTMSGHKSVVSTLVVVNGVLY--SGSWDGTVRLW 652
Query: 344 DLA 352
L+
Sbjct: 653 SLS 655
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 36.7 bits (81), Expect = 0.008
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIK 463
S+DG S D T+++ D G + H + V F + +IV SGS D ++
Sbjct: 115 STDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVR 174
Query: 464 LWNT 475
LWNT
Sbjct: 175 LWNT 178
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 36.7 bits (81), Expect = 0.008
Identities = 33/105 (31%), Positives = 48/105 (45%)
Frame = +2
Query: 158 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 337
D +L SS DK++ ++ D N G + + H + D D + S D +R
Sbjct: 29 DHLLVSSWDKSVRLY----DAN--GDLMRGEFKHGGAVLDCCFHDDSS-GFSVCADTKVR 81
Query: 338 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
D AGK H K V V +S Q+++GS DKTIK W+
Sbjct: 82 RIDFNAGKEDV-LGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWD 125
Score = 32.3 bits (70), Expect = 0.17
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +2
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 424
IS++ S++ ++ L SWDK++RL+D A G R H VL F D+
Sbjct: 19 ISNLRFSNNSDHLLVSSWDKSVRLYD-ANGDLMRGEFKHGGAVLDCCFHDDS 69
Score = 31.1 bits (67), Expect = 0.40
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +2
Query: 203 KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 373
K+ R + N G + L H + V S ++GSWDKT++ WD T R
Sbjct: 79 KVRRIDFNAG-KEDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASGTER 134
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 36.3 bits (80), Expect = 0.011
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 293 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Query: 473 T 475
T
Sbjct: 937 T 937
Score = 34.3 bits (75), Expect = 0.043
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 323 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 469
DKT+++WD A G FE H V S+ + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
Score = 27.9 bits (59), Expect = 3.7
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +2
Query: 83 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 262
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 854 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 908
Query: 263 HFISDVVLSSDGNYALSGSWDKTLRLWD 346
I+ + S+ N +S D L +W+
Sbjct: 909 KRITGLAFSNVLNVLVSSGADAQLCVWN 936
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 36.3 bits (80), Expect = 0.011
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 293 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Query: 473 T 475
T
Sbjct: 937 T 937
Score = 34.3 bits (75), Expect = 0.043
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 323 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 469
DKT+++WD A G FE H V S+ + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
Score = 27.9 bits (59), Expect = 3.7
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +2
Query: 83 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 262
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 854 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 908
Query: 263 HFISDVVLSSDGNYALSGSWDKTLRLWD 346
I+ + S+ N +S D L +W+
Sbjct: 909 KRITGLAFSNVLNVLVSSGADAQLCVWN 936
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 36.3 bits (80), Expect = 0.011
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +2
Query: 245 RLYGHSHFISDVVLSSDGNYALSGSWDKT-----LRLWDLAAGKTTRRFEDHTKDVLSVA 409
+LYGH + + + GN S ++ + LW++ K R + H+ V +
Sbjct: 595 KLYGHGNELFSLCSDHKGNLVASSCKAQSASMAEIWLWEVGTWKAVGRLQSHSLTVTHLE 654
Query: 410 FSVDNRQIVSGSRDKTIKLWN 472
FS D+ ++S SRD+ +++
Sbjct: 655 FSYDDTLLLSVSRDRHFSVFS 675
Score = 35.1 bits (77), Expect = 0.024
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Frame = +2
Query: 245 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL-------AAGKTTRRFEDHTKDVLS 403
RL HS ++ + S D LS S D+ ++ + + K + E H + + +
Sbjct: 642 RLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWA 701
Query: 404 VAFSVDNRQIVSGSRDKTIKLWN 472
+++ Q + SRDKT+K+W+
Sbjct: 702 CSWNPFGHQFATSSRDKTVKIWS 724
Score = 30.7 bits (66), Expect = 0.53
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 13/100 (13%)
Frame = +2
Query: 209 TRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-- 382
+++ N+ + QK GH ++DV + G Y LS S D+T R++ ED
Sbjct: 399 SKESENWQM-QKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRVFSAWKNDEGNEAEDEH 457
Query: 383 ---------HTKDVLSVAF--SVDNRQIVSGSRDKTIKLW 469
H D+ VA N + VSG+ +K ++++
Sbjct: 458 WHELARPQVHGHDINCVAMVQGKGNHRFVSGAEEKVVRVF 497
Score = 30.3 bits (65), Expect = 0.70
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Frame = +2
Query: 68 SKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIV---WKL-----TRDEN 223
SK SE +++ GH VT + T + + +LS S+D+T V WK DE+
Sbjct: 399 SKESENWQMQKVPSGHFAAVTDV-TWARTGEYLLSVSQDQTTRVFSAWKNDEGNEAEDEH 457
Query: 224 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 346
+ + + +++GH +V + +SG+ +K +R+++
Sbjct: 458 WHELARPQVHGHDINCVAMVQGKGNHRFVSGAEEKVVRVFE 498
Score = 29.9 bits (64), Expect = 0.92
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Frame = +2
Query: 104 LRGHNGWVTQIA------TNPKYPD--MILSSSRDKTLIVWKL 208
L+GH W+ + T + P+ M++SSS+DK + +WKL
Sbjct: 219 LKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKL 261
Score = 27.5 bits (58), Expect = 4.9
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 89 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 217
KL + H + + NP + +SSRDKT+ +W + D
Sbjct: 687 KLMAKVEAHKRIIWACSWNP-FGHQFATSSRDKTVKIWSVEND 728
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 12/52 (23%)
Frame = +2
Query: 86 LKLRGTLRGHNGWVTQIATNPKYPDMI------------LSSSRDKTLIVWK 205
+ + L GH WV + P D I LS+S DKT+++W+
Sbjct: 294 ISVESVLIGHEDWVYSVEWQPPVIDFIDGRLVNHQPLSILSASMDKTMMIWR 345
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 36.3 bits (80), Expect = 0.011
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 293 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Query: 473 T 475
T
Sbjct: 948 T 948
Score = 35.5 bits (78), Expect = 0.019
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 323 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 469
DKT+++WD A G FE H V SV + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 27.9 bits (59), Expect = 3.7
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +2
Query: 83 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 262
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 865 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 919
Query: 263 HFISDVVLSSDGNYALSGSWDKTLRLWD 346
I+ + S+ N +S D L +W+
Sbjct: 920 KRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 36.3 bits (80), Expect = 0.011
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 293 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Query: 473 T 475
T
Sbjct: 948 T 948
Score = 35.5 bits (78), Expect = 0.019
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 323 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 469
DKT+++WD A G FE H V SV + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 27.9 bits (59), Expect = 3.7
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +2
Query: 83 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 262
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 865 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 919
Query: 263 HFISDVVLSSDGNYALSGSWDKTLRLWD 346
I+ + S+ N +S D L +W+
Sbjct: 920 KRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 35.5 bits (78), Expect = 0.019
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 18/141 (12%)
Frame = +2
Query: 101 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWKLTRD----------ENNYGIPQKR 247
TL GH G V Q+A +PK+ ++ S S D +I+WK ++ +
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIA 110
Query: 248 LYGHSHFISDVVLSSDGNYAL-----SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 412
H +S +SDGN ++ G WD T G T+ + T+ V+
Sbjct: 111 WAPHELGLSLACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSS 170
Query: 413 SVDN--RQIVSGSRDKTIKLW 469
+ + ++ SG D T+K+W
Sbjct: 171 GMIDPVYKLASGGCDSTVKVW 191
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 236 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 340
PQK GHS I DVV+ G + S D T+++
Sbjct: 3 PQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKI 37
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 35.5 bits (78), Expect = 0.019
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 18/141 (12%)
Frame = +2
Query: 101 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK------LTRD----ENNYGIPQKR 247
TL GH G V ++A +PKY ++ S S D +I+WK T+D ++ +
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIA 110
Query: 248 LYGHSHFISDVVLSSDGNYAL-----SGSWDKTLRLWDLAAGKTTRRFEDHTKD--VLSV 406
H +S SSDGN ++ G WD + G T+ + T ++S
Sbjct: 111 WAPHDIGLSLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSS 170
Query: 407 AFSVDNRQIVSGSRDKTIKLW 469
++ SG D T+K+W
Sbjct: 171 GLLDPVYKLASGGCDNTVKVW 191
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 35.1 bits (77), Expect = 0.024
Identities = 22/112 (19%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 340
+I S S +++W N + +L H +S +G + + ++ +++
Sbjct: 211 VIASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHM-----AAVSPNGRFLAAAAFTADVKV 265
Query: 341 WDLAAGKT--------TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
W++ K + + H V + FS ++ QI++ S+D +I++WN
Sbjct: 266 WEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWN 317
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 35.1 bits (77), Expect = 0.024
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 394
H ++ LS G LSGS DKT+R+W + GK TKD
Sbjct: 894 HKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGKLECAEVIKTKD 939
Score = 33.5 bits (73), Expect = 0.075
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 311 SGSWDKTLRLWDLAAGKTTRRFE--DHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
SG D ++R+W++ T ++ +H V + S ++SGS DKTI++W
Sbjct: 868 SGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVW 922
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 35.1 bits (77), Expect = 0.024
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRD--ENNYGIPQKRLYGHSHFISDVVLSSDGN----YALSGSWD 325
ILS+ RD + V + E + I Q GHS FI+ S Y +SGS D
Sbjct: 170 ILSADRDFKIRVTVFPKKPLEGAHEI-QSFCLGHSEFITCTAFVSTPELTQGYLMSGSGD 228
Query: 326 KTLRLWDLAAG 358
T+RLWD+ +G
Sbjct: 229 STVRLWDITSG 239
Score = 32.3 bits (70), Expect = 0.17
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 16/113 (14%)
Frame = +2
Query: 182 DKTLIVWKLTRDENNYG--IPQKR----LYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 343
DK +VW + D N G +P K+ L + I+ + S DG Y LS D +R+
Sbjct: 123 DKFGVVWVIELDGINDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILSADRDFKIRVT 182
Query: 344 -----DLAAGKTTRRF-EDHTKDVLSVAF----SVDNRQIVSGSRDKTIKLWN 472
L + F H++ + AF + ++SGS D T++LW+
Sbjct: 183 VFPKKPLEGAHEIQSFCLGHSEFITCTAFVSTPELTQGYLMSGSGDSTVRLWD 235
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 34.7 bits (76), Expect = 0.032
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 323 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSGSRDKTIKLW 469
DKT+++WD G FE H V SV +N Q I S + D IK W
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 31.1 bits (67), Expect = 0.40
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Frame = +2
Query: 269 ISDVVLSSDGNYALSGSWDKTL-RLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ-- 430
++ VV S DG L ++ K + ++ G+ R + H +V +AFS N+Q
Sbjct: 422 VNRVVWSPDGGL-LGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLC 480
Query: 431 IVSGSRDKTIKLWN 472
+V+ DKTIK+W+
Sbjct: 481 VVTCGEDKTIKVWD 494
Score = 30.7 bits (66), Expect = 0.53
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +2
Query: 293 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
D N G D +++++++ + + + H K V +AFS +VS D + +W+
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 34.7 bits (76), Expect = 0.032
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 323 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSGSRDKTIKLW 469
DKT+++WD G FE H V SV +N Q I S + D IK W
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 31.1 bits (67), Expect = 0.40
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Frame = +2
Query: 269 ISDVVLSSDGNYALSGSWDKTL-RLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ-- 430
++ VV S DG L ++ K + ++ G+ R + H +V +AFS N+Q
Sbjct: 422 VNRVVWSPDGGL-LGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLC 480
Query: 431 IVSGSRDKTIKLWN 472
+V+ DKTIK+W+
Sbjct: 481 VVTCGEDKTIKVWD 494
Score = 30.7 bits (66), Expect = 0.53
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +2
Query: 293 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
D N G D +++++++ + + + H K V +AFS +VS D + +W+
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 34.7 bits (76), Expect = 0.032
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +2
Query: 206 LTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 385
+ D + P L G S S S + S ++D +++WD+A + ++H
Sbjct: 566 IVNDNRDIHYPVVELAGRSKLSSLCWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEH 625
Query: 386 TKDVLSVAF-SVDNRQIVSGSRDKT 457
K V S+ S D + SGS D T
Sbjct: 626 KKRVWSIDISSADPTLLASGSDDGT 650
Score = 33.5 bits (73), Expect = 0.075
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Frame = +2
Query: 125 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 304
VT++ + K I SS D TL+ + ++ G+ + ++ S G
Sbjct: 619 VTEMKEHKKRVWSIDISSADPTLLA---SGSDDGTGVSIGTIKTKANVCCVQFPSDSGRS 675
Query: 305 ALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
GS D + +DL K H+K V V F VD+ +VS S D T+KLW+
Sbjct: 676 LAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKF-VDSSTLVSSSTDNTLKLWD 731
Score = 29.9 bits (64), Expect = 0.92
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 101 TLRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFI 271
T+ GH+ V+ + K+ D ++SSS D TL +W L+ + P GH++
Sbjct: 699 TMIGHSKTVSYV----KFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLK 754
Query: 272 SDVVLSSDGNYALSGS 319
+ V LS Y +GS
Sbjct: 755 NFVGLSVSDGYIATGS 770
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 34.7 bits (76), Expect = 0.032
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 245 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 367
R H ++ + ++DG Y LS D +RLWD+ +G+ T
Sbjct: 307 RATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNT 347
Score = 31.9 bits (69), Expect = 0.23
Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Frame = +2
Query: 113 HNGWVTQI-ATNPKYPDMILSSSRDKTLIVWKLTRDENNY-GIPQKRLYGHSHFISDVVL 286
H G VT + ATN +LS+ D + +W + N R+ + D
Sbjct: 311 HYGAVTGLKATNDGM--YLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQLD--- 365
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 466
+SD + KT++ + + +G+TT H + V + F+ +++++ + D+ I +
Sbjct: 366 TSDDPALVFVPCMKTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILV 425
Query: 467 WN 472
W+
Sbjct: 426 WS 427
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 34.3 bits (75), Expect = 0.043
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNRQ 430
H +++ +V + + + +S S DKTLR+WDL T + F + H V FS+ +
Sbjct: 453 HDGYVTKLV-APESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGV--SGFSIWGKD 509
Query: 431 IVSGSRD 451
++S SR+
Sbjct: 510 VISISRN 516
Score = 32.3 bits (70), Expect = 0.17
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 107 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 214
R H+G+VT++ + +++SSS DKTL +W L +
Sbjct: 451 RAHDGYVTKLVAPESH--LLVSSSLDKTLRIWDLRK 484
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 34.3 bits (75), Expect = 0.043
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 92 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 241
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 194 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 243
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 34.3 bits (75), Expect = 0.043
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 92 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 241
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 229 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 278
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 34.3 bits (75), Expect = 0.043
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 338 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWN 472
+WDL AGK+ +E H + + S+ F+ N ++ + S D T LW+
Sbjct: 332 VWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWD 377
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 33.9 bits (74), Expect = 0.057
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 236 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 415
P L GH+ +S V G +G+ D L+LW + G+ R +E H + V S
Sbjct: 105 PALTLQGHTKTVSYVRFLDGGTVVTAGT-DGCLKLWSVEDGRVIRTYEGHVNNRNFVGLS 163
Query: 416 V 418
V
Sbjct: 164 V 164
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 33.1 bits (72), Expect = 0.099
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +2
Query: 293 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
D N G D T+ ++++ + + + H K + +AFS +VS D I W+
Sbjct: 873 DNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWS 932
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 33.1 bits (72), Expect = 0.099
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 202
L GH W + NP+Y ++ILS D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 33.1 bits (72), Expect = 0.099
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 202
L GH W + NP+Y +ILS+ D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 32.7 bits (71), Expect = 0.13
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 230 GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 346
G+ L H ++D+ SSD ++ +S S D T+++WD
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109
Score = 30.3 bits (65), Expect = 0.70
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 356 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 475
G ++H V +A S D+ VS S D T+K+W++
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDS 1110
Score = 30.3 bits (65), Expect = 0.70
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 340
M++ S+++ + +W D + + + G ++S +V S GN+ +SGS L L
Sbjct: 1203 MVMYSTQNCGIHLWDTRSDLDAWTLKANPEEG---YVSSLVTSPCGNWFVSGSSRGVLTL 1259
Query: 341 WDL 349
WDL
Sbjct: 1260 WDL 1262
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 32.7 bits (71), Expect = 0.13
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 77 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 208
SET+ +L GH V +I T P P +++++S+D+++ +W +
Sbjct: 117 SETI--HKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNV 158
Score = 29.5 bits (63), Expect = 1.2
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 15/125 (12%)
Frame = +2
Query: 143 NPKYPDMILSSSRDKTLIVWKLTRDENN-----------YGIPQKRLYGHSHFISDVVLS 289
N + D ILS S D +++W+ EN+ Y +P ++ F D+ LS
Sbjct: 246 NRWFGDFILSKSVDNEILLWEPQLKENSPGEGASDVLLRYPVPMCDIW-FIKFSCDLHLS 304
Query: 290 SDGNYALSGSWDKTLRLWDLAAGK---TTRRFEDHTKDVL-SVAFSVDNRQIVSGSRDKT 457
S G+ + + +WDL + T+ + +K V+ A SVD I++ D T
Sbjct: 305 S----VAIGNQEGKVYVWDLKSCPPVLITKLSHNQSKSVIRQTAMSVDGSTILACCEDGT 360
Query: 458 IKLWN 472
I W+
Sbjct: 361 IWRWD 365
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 32.7 bits (71), Expect = 0.13
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 254 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 361
GH+ ++ + S G + SGS D ++R+W++ G+
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGR 456
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 374 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
++ HT V S++ I SGS D ++++W
Sbjct: 419 YKGHTGAVTSISTDSSGEWIASGSTDGSVRMW 450
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 32.3 bits (70), Expect = 0.17
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 245 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVD 421
RL GH I +V S DG+ +S S D++ R+W++ + + H+ V S
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS-- 287
Query: 422 NRQIVSGSRDKTIKLW 469
+ IV+ D T ++W
Sbjct: 288 DSLIVTAGEDCTCRVW 303
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 32.3 bits (70), Expect = 0.17
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 245 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVD 421
RL GH I +V S DG+ +S S D++ R+W++ + + H+ V S
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS-- 287
Query: 422 NRQIVSGSRDKTIKLW 469
+ IV+ D T ++W
Sbjct: 288 DSLIVTAGEDCTCRVW 303
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 31.9 bits (69), Expect = 0.23
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALS-GSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQ 430
H I+ V S+ + + S+DK ++LWDL + + TK + V FS D+R
Sbjct: 582 HQEHINVVKFSNHSPFLFATSSFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRY 641
Query: 431 IVSGSRDKTIK 463
+++ + D ++
Sbjct: 642 LLASAVDNEVR 652
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 31.9 bits (69), Expect = 0.23
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +2
Query: 236 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS-VAF 412
P L GH I+ + +S+D + +SGS D T L G+ R + + +S +A
Sbjct: 1103 PSHILCGHDDIITCLYVSTDLDIVISGSKDGTCVFHTLREGRYIRSLKHPSGSAVSKLAA 1162
Query: 413 SVDNRQIVSGSRDKTIKLWN 472
S R ++ G D ++ L++
Sbjct: 1163 SHHGRIVLYGDDDLSLHLYS 1182
Score = 30.7 bits (66), Expect = 0.53
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 373
H +S V +++D +GS+D T+ +WD+ +T +
Sbjct: 1045 HKDVVSCVAVTADSTILATGSYDTTVMVWDILRMRTPEK 1083
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 31.5 bits (68), Expect = 0.30
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 383 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
H K V V +S Q+++GS DKT+K W+
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
Score = 31.1 bits (67), Expect = 0.40
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 421
IS++ S++ ++ L SWDK +RL+D++ F H VL F D
Sbjct: 20 ISNLRFSNNSDHLLVSSWDKRVRLYDVSTNSLKGEFL-HGGAVLDCCFHDD 69
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWD 346
H + V S ++GSWDKT++ WD
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 31.5 bits (68), Expect = 0.30
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +2
Query: 215 DENNYGIPQKRLYGHSHFISDVVLSSDGNY-ALSGSWDKTLRLWDLAAGKTTRRFEDHTK 391
D N+ + + + S ++++ S DG A+ G + L L D +GK E H
Sbjct: 264 DATNFALLNRFAFHWS--VNNISTSPDGKLVAVLGDSPECL-LADTGSGKVIHGLEGHLD 320
Query: 392 DVLSVAFSVDNRQIVSGSRDKTIKLWN 472
S A+ + + + +G++D T +LW+
Sbjct: 321 YSFSSAWHPNGQILATGNQDTTCRLWD 347
Score = 27.1 bits (57), Expect = 6.5
Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDN 424
L GH + +G +G+ D T RLWD+ ++ + + + + ++ F+ D
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDG 374
Query: 425 RQIVSGSRDKTIKLWNT 475
R + + L++T
Sbjct: 375 RFLAMAEPADFVHLFDT 391
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 31.5 bits (68), Expect = 0.30
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 245 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 367
R H ++ + ++DG Y LS +RLWD+ +G+ T
Sbjct: 307 RATAHYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNT 347
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +2
Query: 326 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
KT++ + + +G+TT H + V + F+ +++++ + D+ I +W+
Sbjct: 379 KTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWS 427
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 31.1 bits (67), Expect = 0.40
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 143 NPKYPDMILSSSRDKTLIVW---KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALS 313
NP P+++LS D +W KL + + + KR+ ++F S G L+
Sbjct: 321 NPVQPELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYF-----SPSSGTKILT 375
Query: 314 GSWDKTLRLWDLAAG 358
D +R+WD G
Sbjct: 376 TCQDNRIRIWDSIFG 390
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 31.1 bits (67), Expect = 0.40
Identities = 21/100 (21%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHS---HFISDVVLSSDGN-YALSGSWD 325
++ S+ DK + +W+ ++ + G +P G +S + S G+ Y SG
Sbjct: 57 VVASTGEDKKISLWR--KNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTG 114
Query: 326 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 445
+ +++WDL ++ + HT + V ++ + + S S
Sbjct: 115 QIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVS 154
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 31.1 bits (67), Expect = 0.40
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 308 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 415
+SGS D T+R+WDL +G H V + S
Sbjct: 553 ISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILS 588
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 31.1 bits (67), Expect = 0.40
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTRRFEDHTKDV 397
+ ++V S +G Y L+ S D+T+R+++ L A + ED K++
Sbjct: 219 VKNIVFSRNGQYLLTNSHDRTIRIYENLLPAKNVLKSLEDLGKNI 263
Score = 27.1 bits (57), Expect = 6.5
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH--TKDVLSVAFSVDNRQIVSG 442
I V + G+ +G D +WD + D+ + + SV++S +++
Sbjct: 26 IKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVS 85
Query: 443 SRDKTIKLWN 472
+ DK++ LW+
Sbjct: 86 AADKSLTLWD 95
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 373
I+ V S G+ L + DK+L LWD++ G+ R
Sbjct: 70 ITSVSWSKYGHRLLVSAADKSLTLWDVSTGEKIAR 104
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 31.1 bits (67), Expect = 0.40
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 5/104 (4%)
Frame = +2
Query: 53 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG 232
L+ P S S + L H G V + N K P+ + S + D T+ +W L N
Sbjct: 94 LWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLA----NPS 149
Query: 233 IPQKRLYGHSHFISDVVLSSDGNYAL-----SGSWDKTLRLWDL 349
P L G ++ + S N S S + T +WD+
Sbjct: 150 KPSHYLKGTGSYMQSEISSLSWNKGFQHVLASTSHNGTTVIWDV 193
>At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 500
Score = 31.1 bits (67), Expect = 0.40
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDL 349
ISD+ S DG Y LS + TL+LWD+
Sbjct: 332 ISDIKFSKDGRYILSRDY-MTLKLWDI 357
>At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 501
Score = 31.1 bits (67), Expect = 0.40
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDL 349
ISD+ S DG Y LS + TL+LWD+
Sbjct: 333 ISDIKFSKDGRYILSRDY-MTLKLWDI 358
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 30.7 bits (66), Expect = 0.53
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +2
Query: 314 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
G L LW + HT VL +A S + + S + D+ ++LWN
Sbjct: 362 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWN 414
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 30.7 bits (66), Expect = 0.53
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 412
S DG Y L+G D +++W + K E H V VAF
Sbjct: 354 SMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 395
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 30.7 bits (66), Expect = 0.53
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +2
Query: 293 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 469
D N G D ++ ++++ + + + H K + +AFS +VS D + W
Sbjct: 884 DNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFW 942
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 30.7 bits (66), Expect = 0.53
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 287 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 412
S DG Y L+G D +++W + K E H V VAF
Sbjct: 354 SMDGKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 395
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 30.7 bits (66), Expect = 0.53
Identities = 21/107 (19%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Frame = +2
Query: 161 MILSSSRDKTLIVWKLTRDENNYGIP---QKRLYGHSHFISDVVLSSDGNYALSGSWDKT 331
++++ + D + VW++++D +K L H+ ++ + +S SGS D T
Sbjct: 3344 IVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCT 3403
Query: 332 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+ +WDL++ R+ D + ++ + +IV+ + + +W+
Sbjct: 3404 VIIWDLSSLSFVRQLPDFPVPISAIYINDLTGEIVTAA-GTVLAVWS 3449
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 30.3 bits (65), Expect = 0.70
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 383 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWN 472
H V VAFS+ R ++SG DKT+K+W+
Sbjct: 247 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +2
Query: 254 GHSHFISDVVLS---SDGNYALSGSWDKTLRLWD 346
GH+ +S V S G + +SG DKT+++WD
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 30.3 bits (65), Expect = 0.70
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 383 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWN 472
H V VAFS+ R ++SG DKT+K+W+
Sbjct: 273 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +2
Query: 254 GHSHFISDVVLS---SDGNYALSGSWDKTLRLWD 346
GH+ +S V S G + +SG DKT+++WD
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 30.3 bits (65), Expect = 0.70
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 92 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 256
LR RGH+ VT +A + ++ S S D + VWK++ E + G Q ++ G
Sbjct: 213 LRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKIS--EGSEGDEQSQITG 265
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 29.9 bits (64), Expect = 0.92
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +2
Query: 299 NYALSGSWDKTLRLWDLAAGKTTRR-FED---HTKDVLSVAFSV-DNRQIVSGSRDKTIK 463
N +GS D WD+ R F++ HT V ++ + D I +GS D+T++
Sbjct: 177 NLVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLR 236
Query: 464 LWNT 475
+W+T
Sbjct: 237 VWDT 240
Score = 27.9 bits (59), Expect = 3.7
Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 107 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 286
+GH+ + + + P+++ + S D W + + + Q H+ + +
Sbjct: 160 KGHDFELWTASFDLNNPNLVYTGSDDCKFSCWDIRDSPADNRVFQNSKV-HTMGVCCISS 218
Query: 287 SSDGNYAL-SGSWDKTLRLWD 346
+ Y++ +GS+D+TLR+WD
Sbjct: 219 NPSDPYSIFTGSYDETLRVWD 239
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 29.9 bits (64), Expect = 0.92
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 278 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 415
+ +S DG Y +G L ++DL + T + H ++ S++FS
Sbjct: 391 LAVSEDGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSLSFS 436
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +2
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
LS DG D L D + G+T + H + A+ + +G++DKT +
Sbjct: 285 LSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCR 344
Query: 464 LWNT 475
+W+T
Sbjct: 345 IWDT 348
Score = 27.5 bits (58), Expect = 4.9
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDN 424
L GH + +G +G+ DKT R+WD ++ + + V S+ F+ D
Sbjct: 315 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDG 374
Query: 425 RQIVSGSRDKTIKLWNT 475
R + + +++T
Sbjct: 375 RYVAMAEPADFVHIYDT 391
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +2
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 463
LS DG D L D + G+T + H + A+ + +G++DKT +
Sbjct: 279 LSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCR 338
Query: 464 LWNT 475
+W+T
Sbjct: 339 IWDT 342
Score = 27.5 bits (58), Expect = 4.9
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +2
Query: 248 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDN 424
L GH + +G +G+ DKT R+WD ++ + + V S+ F+ D
Sbjct: 309 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDG 368
Query: 425 RQIVSGSRDKTIKLWNT 475
R + + +++T
Sbjct: 369 RYVAMAEPADFVHIYDT 385
>At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1
significant, 2 weak WD-40 repeats (PF00400); similar to
transducin beta-like 1 protein.(SP:O60907) [Homo
sapiens]
Length = 467
Score = 29.5 bits (63), Expect = 1.2
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +2
Query: 164 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 343
+++SS D TL ++ + G+ + +SH + + + LSG D R+W
Sbjct: 358 LMASSMDGTLYDQRMVK--RGVGVQTYEGHVNSHTPIEFGIDPSERFILSGGDDCYTRIW 415
Query: 344 DLAAGK--TTRRFEDHTKDVLSVAFSVDNRQ 430
+ +G+ + +F + V V +S D RQ
Sbjct: 416 SIKSGQLMSENKFSNSVPSV--VCWSADERQ 444
>At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEMETER
protein [Arabidopsis thaliana] GI:21743571; contains
Pfam profile PF00730: HhH-GPD superfamily base excision
DNA repair protein
Length = 1729
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 323 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 460
D+T R+W+L GK + D KD + + R++ G D I
Sbjct: 702 DETTRIWNLLMGKGDEKEGDEEKDKKKEKWWEEERRVFRGRADSFI 747
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 29.5 bits (63), Expect = 1.2
Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +2
Query: 41 RESSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 220
R L +P + L+ G G ++ +A +P M+ S +T +++ E
Sbjct: 187 RVFDLHRPGRDFRQYSTLQKNKEGQAGILSTLAFSPTNSGMLAVGSYGQTTGIYREDNME 246
Query: 221 NNYGIPQKRLYGHSHFISDVVLSSDGNYALSGS-WDKTLRLWDL 349
Y L+G ++ V S DGNY +G D + WD+
Sbjct: 247 LLYV-----LHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDI 285
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 29.5 bits (63), Expect = 1.2
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +2
Query: 77 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT-----RDENNYGIPQ 241
S L+L +L H V + + Y MI SSS D T+I+W L+ R N+ +P
Sbjct: 3311 SRRLRLEKSLCAHTAKVICLRVSQPYM-MIASSSDDCTVIIWDLSSLSFVRQLPNFSVPV 3369
Query: 242 KRLY 253
+Y
Sbjct: 3370 TVVY 3373
Score = 27.5 bits (58), Expect = 4.9
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Frame = +2
Query: 284 LSSDGNYALSGSWDKTLRLW----DLAAGKTTRRFED----HTKDVLSVAFSVDNRQIVS 439
+S DG ++G+ D + +W D G R E HT V+ + S I S
Sbjct: 3282 VSHDGRIVVTGAEDGLVSVWRVSKDGPRGSRRLRLEKSLCAHTAKVICLRVSQPYMMIAS 3341
Query: 440 GSRDKTIKLWN 472
S D T+ +W+
Sbjct: 3342 SSDDCTVIIWD 3352
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 29.5 bits (63), Expect = 1.2
Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Frame = +2
Query: 104 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 283
L+GH G VT + +P +++ S T++ W+L ++ + K + + F + +V
Sbjct: 142 LKGHKGPVTGLDFHPN-GELLASIDTTGTVLCWELQNGVVSFTL--KGVAPDTGFNTSIV 198
Query: 284 ----LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSVAFSVDNRQIVSGSR 448
S DG + ++D G+ DH + + + ++ + + I +
Sbjct: 199 NIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGL 258
Query: 449 DKTIKLWN 472
DK + LW+
Sbjct: 259 DKQVLLWD 266
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 257 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 361
HS ++ + SSDG Y SG + L +W L GK
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK 316
>At5g12920.1 68418.m01482 expressed protein contains 3 weak WD-40
repeats (PF00400); low similarity to MEK kinase alpha
(GI:4028547); transcriptional repressor TUP1
(GI:3406654) [Dictyostelium discoideum]; Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (TGF-beta receptor interacting protein 1)
(TRIP-1) (SP:Q38884) [Arabidopsis thaliana]
Length = 442
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +2
Query: 260 SHFISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQ 430
S +SDV ++SD + + S + +WD AG + D + S+ VDN+
Sbjct: 150 SRGLSDVAITSDEDSRIFSPDTLGMVHVWDRRAGVSPCIELSTDRYDSIKSIQIYVDNQT 209
Query: 431 IVSGSRDKTIKLWN 472
I ++ I +W+
Sbjct: 210 IFGAGKEGIIHIWD 223
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +2
Query: 296 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 475
G+ G D ++ + L++ K + E H + + +AFS +VS D + LW+T
Sbjct: 481 GDLLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWST 540
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +2
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 445
+S + S N L SWD LRL+D+ + + +L F ++ SGS
Sbjct: 16 VSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAA-LLDCCFENESTSFTSGS 73
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +2
Query: 269 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 445
+S + S N L SWD LRL+D+ + + +L F ++ SGS
Sbjct: 16 VSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAA-LLDCCFENESTSFTSGS 73
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = +2
Query: 260 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED--HTKDVLSVAFSVDN--- 424
SH ++ G A SG D T+ L+DL + + D H + +++F +
Sbjct: 39 SHISPITTVACSGPAAASGGSDDTIHLYDLPSASSLGSLLDHNHAASITALSFYTPSSLS 98
Query: 425 --RQIVSGSRDKTIKLWNT 475
R ++S + D ++ +++T
Sbjct: 99 FPRNLISAAADGSVAIFDT 117
>At5g60050.1 68418.m07530 PRLI-interacting factor-related contains
weak similarity to PRLI-interacting factor G
(GI:11139264) [Arabidopsis thaliana]
Length = 499
Score = 28.3 bits (60), Expect = 2.8
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 179 RDKTLIVWKLTRDENNYGIPQKRLYGHSH 265
R+ ++++KL R+E +Y + + LYG H
Sbjct: 271 REMKVLIFKLVREEADYDVSRDTLYGLCH 299
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 28.3 bits (60), Expect = 2.8
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Frame = +2
Query: 155 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL-----SGS 319
PD++ +SS L +W+++ DE+ + + S + S D N A + S
Sbjct: 98 PDLLATSS--DFLRLWRISDDESRVELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSS 155
Query: 320 WDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 412
D T +WD+ + H K+V +A+
Sbjct: 156 IDTTCTIWDIEREVVDTQLIAHDKEVYDIAW 186
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 28.3 bits (60), Expect = 2.8
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +2
Query: 224 NYGIPQKRLYGHSHF---ISDVVLSSDGNY-ALSGSWDKTLRLWDLAAGKTTRRFEDHTK 391
++ + + +L H F ++ LS DG A+ G + L + D GKT H
Sbjct: 262 DFDMERYQLVKHFRFPWPVNHASLSPDGKLLAIVGDNPEGL-IVDPNTGKTLETLSGHLD 320
Query: 392 DVLSVAFSVDNRQIVSGSRDKTIKLWN 472
+ A+ D +G++DKT ++W+
Sbjct: 321 FSFASAWHPDGVTFSTGNQDKTCRVWD 347
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 224 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 349
N G + L GH F DG +G+ DKT R+WD+
Sbjct: 307 NTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDI 348
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 386 TKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
T LSV +S D ++I SGS D I+ W+
Sbjct: 198 TGRALSVTWSADAQRIFSGSSDGLIRCWD 226
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 27.9 bits (59), Expect = 3.7
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 269 ISDVVLSSDGNY-ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 445
++ LS DG + G ++L L D GKT H + A+ D +G+
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESL-LVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGN 336
Query: 446 RDKTIKLWN 472
+DKT ++W+
Sbjct: 337 QDKTCRVWD 345
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +2
Query: 224 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVL 400
N G L GH F DG +G+ DKT R+WD+ K+ + +
Sbjct: 305 NTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIR 364
Query: 401 SVAFSVDNR 427
S+ ++ D +
Sbjct: 365 SIRYTSDGK 373
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 27.5 bits (58), Expect = 4.9
Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +2
Query: 131 QIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS--SDGNY 304
++A +P+ +I + L W+ +++N +K + + LS DG
Sbjct: 97 RMAIHPRQGGLICALPNSCRLFDWENIIEDDNEEESEKVVKELKDVGQQLSLSFNQDGTV 156
Query: 305 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 439
+G+ D TLR+++ + KT V S+ FS + +VS
Sbjct: 157 LATGAEDGTLRVFEWPSMKTLLNESKTHASVKSLTFSESGKFLVS 201
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 27.5 bits (58), Expect = 4.9
Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = +2
Query: 131 QIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS--SDGNY 304
++A +P+ +I + L W+ +++N +K + + LS DG
Sbjct: 97 RMAIHPRQGGLICALPNSCRLFDWENIIEDDNEEESEKVVKELKDVGQQLSLSFNQDGTV 156
Query: 305 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 439
+G+ D TLR+++ + KT V S+ FS + +VS
Sbjct: 157 LATGAEDGTLRVFEWPSMKTLLNESKTHASVKSLTFSESGKFLVS 201
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 398 LSVAFSVDNRQIVSGSRDKTIKLWN 472
LSV +S D ++I SGS D I+ W+
Sbjct: 202 LSVTWSPDAKRIFSGSSDGLIRCWD 226
>At4g03970.1 68417.m00561 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28170, At1g35110,
At1g44880, At3g42530, At4g19320, At5g36020, At3g43010,
At2g10350
Length = 1043
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 146 PKYPDMILSSSRDKTLIVWK-LTRDENNYGIPQ 241
P D++L S KT+++WK LT + +PQ
Sbjct: 220 PGLLDLVLDDSTSKTILLWKRLTHPKQVISLPQ 252
>At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly
identical to auxin transport protein; BIG [Arabidopsis
thaliana] GI:21779966; contains Pfam profiles PF02207:
Putative zinc finger in N-recognin, PF00569: Zinc
finger ZZ type
Length = 5098
Score = 27.5 bits (58), Expect = 4.9
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 81 SDIFENGLKSDDSLKRQVR 25
SD+F L+SDDS+KR +R
Sbjct: 27 SDLFSRRLRSDDSIKRGLR 45
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 27.5 bits (58), Expect = 4.9
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 6/127 (4%)
Frame = +2
Query: 110 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 289
GH V + +P ++ S S D ++ VW + ++ P H+ ++ + +
Sbjct: 267 GHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKS----PALSFKAHNADVNVISWN 322
Query: 290 SDGNYAL-SGSWDKTLRLWDLAAGK----TTRRFEDHTKDVLSVAFSVDNRQIVS-GSRD 451
+ L SGS D T + DL K FE H + S+ +S ++ S D
Sbjct: 323 RLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGD 382
Query: 452 KTIKLWN 472
+ +W+
Sbjct: 383 NQLTIWD 389
>At4g04570.1 68417.m00670 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 654
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/53 (18%), Positives = 26/53 (49%)
Frame = -2
Query: 420 STEKATESTSLVWSSNRLVVLPAARSHKRKVLSQEPERA*LPSLDSTTSEMKC 262
ST++ T S+ ++W + +++P ++ + + E + D +E+ C
Sbjct: 601 STKRPTMSSVIIWLGSETIIIPLPKAPAFTWIRSQSESGAMSLSDDVFTELSC 653
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = +2
Query: 329 TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 472
T+ +W + + + H V SVAF + + + +++ IK+W+
Sbjct: 262 TVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWD 309
>At2g18810.1 68415.m02189 hypothetical protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 234
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 409
++S NY L W+K + L G R + H+ D+L A
Sbjct: 139 MTSTSNYVLGSGWNKVVTENILETGTRLRLWSFHSPDMLFFA 180
>At1g26330.1 68414.m03211 hypothetical protein
Length = 1196
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +2
Query: 281 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 451
V + + ++G+ D + +WDL+ G D +S + D+R I S D
Sbjct: 1129 VAGTISGHGVAGTLDGLVYMWDLSTGTKLGSLHDFKGQRVSCISTDDSRNICIASED 1185
>At2g31720.1 68415.m03871 expressed protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 313
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 284 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 412
++S NY L W+K + L G R + H+ D+L AF
Sbjct: 221 MTSTSNYVLGLGWNKVVTDNILQRGTRLRIWSFHSPDMLFFAF 263
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,520,691
Number of Sequences: 28952
Number of extensions: 213281
Number of successful extensions: 1640
Number of sequences better than 10.0: 236
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1393
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 811731120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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