Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0889
         (560 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    96   6e-22
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          24   3.9  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   6.8  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   6.8  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          23   9.0  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          23   9.0  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          23   9.0  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.0  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 96.3 bits (229), Expect = 6e-22
 Identities = 42/92 (45%), Positives = 58/92 (63%)
 Frame = +2

Query: 107 IKDSDDLKTRLAEAGDKLVVIDFMATWCGPCKMIGPKLDEIAAEMXXXXXXXXXXXXXXX 286
           +KDS+D   +L  AGD+LVV+DF ATWCGPCK+I PKL+E   +                
Sbjct: 5   VKDSEDFNNKLEAAGDQLVVVDFFATWCGPCKVIAPKLEEFQNKYADKIVVVKVDVDECE 64

Query: 287 XXASEYNINSMPTFVFVKNGKKLDEFSGANVD 382
             A++YNI SMPTF+F+K  + + +FSGAN +
Sbjct: 65  ELAAQYNIASMPTFLFIKRKEVVGQFSGANAE 96


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 135 GWRKQATSSS*STSWRPGADRAR*SGLNW 221
           GW+ ++ SS  +    PGA RA    L+W
Sbjct: 214 GWKYRSISSLHAPPSHPGAHRAAEPRLDW 242


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 426 LVSIYLCLRIVVLSLSTLAPE 364
           LVSI +C+ +VVL++   +P+
Sbjct: 316 LVSISICVTVVVLNVHFRSPQ 336


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 426 LVSIYLCLRIVVLSLSTLAPE 364
           LVSI +C+ +VVL++   +P+
Sbjct: 316 LVSISICVTVVVLNVHFRSPQ 336


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 217 FRPDHLARSAPGRHEVDHDELVAC 146
           F+P  L   A G HE  ++ ++ C
Sbjct: 263 FQPSFLGMEACGIHETTYNSIMKC 286


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 217 FRPDHLARSAPGRHEVDHDELVAC 146
           F+P  L   A G HE  ++ ++ C
Sbjct: 263 FQPSFLGMEACGIHETTYNSIMKC 286


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 217 FRPDHLARSAPGRHEVDHDELVAC 146
           F+P  L   A G HE  ++ ++ C
Sbjct: 263 FQPSFLGMEACGIHETTYNSIMKC 286


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +2

Query: 2   GIRHEGTLSLACFLFAF*TVILFLVSIYLPKMSIHIKDSDDLKTRLAEAGD 154
           G+   G ++   F+  F      L++++L     ++ D+D L T   E GD
Sbjct: 683 GVASLGIIASIYFIILFICGNYILLNVFLAIAVDNLADADSLTTVEKEEGD 733


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,405
Number of Sequences: 2352
Number of extensions: 9563
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)