Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0884
         (399 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.28 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   0.28 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   3.4  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.0 bits (52), Expect = 0.28
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 38  FLNQYLKLKFELKISHQ 88
           FLNQYL+LK E +IS++
Sbjct: 201 FLNQYLRLKPEGRISNR 217



 Score = 21.8 bits (44), Expect = 2.6
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 107  KRLFNITDGIFLIQI*ALNIDLKKKKKNSRLVLS 6
            K++    DGI    I    +   KKKK  R+V++
Sbjct: 1181 KKIVKFLDGIMAFDIQLKQVVNYKKKKFQRMVVA 1214


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 25.0 bits (52), Expect = 0.28
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 38  FLNQYLKLKFELKISHQ 88
           FLNQYL+LK E +IS++
Sbjct: 219 FLNQYLRLKPEGRISNR 235


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 5/23 (21%), Positives = 16/23 (69%)
 Frame = -3

Query: 262 YISSVVFI*YEL*IVLLMYAYCL 194
           Y  +++F+ + + +++L+  YC+
Sbjct: 237 YFLTIIFLFFIIPLIILLILYCI 259


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,027
Number of Sequences: 336
Number of extensions: 1631
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)