Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0884
         (399 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011158-1|AAR82826.1|  250|Drosophila melanogaster AT25722p pro...    29   3.0  
BT021399-1|AAX33547.1|  368|Drosophila melanogaster LD12915p pro...    27   7.0  

>BT011158-1|AAR82826.1|  250|Drosophila melanogaster AT25722p
          protein.
          Length = 250

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +2

Query: 8  RELVSSFFFFFLNQYL 55
          RELVSSFFFFFL + +
Sbjct: 2  RELVSSFFFFFLAEVI 17


>BT021399-1|AAX33547.1|  368|Drosophila melanogaster LD12915p
          protein.
          Length = 368

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +2

Query: 8  RELVSSFFFFFL-NQYLKLKFELKISHQ 88
          RELVSSFFFFF  +   ++K  LK  +Q
Sbjct: 1  RELVSSFFFFFFASSKTEIKPLLKFIYQ 28


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,468,034
Number of Sequences: 53049
Number of extensions: 197088
Number of successful extensions: 186
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)