Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0883
(341 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical pr... 28 1.5
U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein. 28 1.5
AY303575-1|AAP57297.1| 382|Caenorhabditis elegans cell death-re... 27 2.7
AC024791-9|AAF60653.1| 382|Caenorhabditis elegans Cell-death-re... 27 2.7
Z81147-6|CAB03535.1| 506|Caenorhabditis elegans Hypothetical pr... 27 3.5
Z81097-5|CAB03168.1| 243|Caenorhabditis elegans Hypothetical pr... 27 4.7
Z50016-14|CAI06050.2| 177|Caenorhabditis elegans Hypothetical p... 27 4.7
U41546-4|AAC48218.1| 150|Caenorhabditis elegans Hypothetical pr... 27 4.7
U97406-2|AAC24293.2| 253|Caenorhabditis elegans Hypothetical pr... 26 6.1
Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical pr... 26 8.1
>Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical
protein E02H4.1 protein.
Length = 664
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = -2
Query: 310 RFSNAYDRASSFGNTNSSSAHCLTTRRLFFAPRPGQQHAK 191
R+ + R++ +TN+++ +CLTT + + Q+H K
Sbjct: 493 RYPKPWKRSAWCDSTNTTTLNCLTTEGAKLSTKENQKHCK 532
>U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein.
Length = 664
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = -2
Query: 310 RFSNAYDRASSFGNTNSSSAHCLTTRRLFFAPRPGQQHAK 191
R+ + R++ +TN+++ +CLTT + + Q+H K
Sbjct: 493 RYPKPWKRSAWCDSTNTTTLNCLTTEGAKLSTKENQKHCK 532
>AY303575-1|AAP57297.1| 382|Caenorhabditis elegans cell
death-related nuclease 1 protein.
Length = 382
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +3
Query: 147 EMSYGIERFFLLSYCLACCW----PGLGAKNNLRVVRQWAELEFVFPNEEARSY 296
EM +E F L L C + G+G K + ++RQ +E + N + Y
Sbjct: 215 EMKLSVEEFIDLCILLGCDYCGTIRGVGPKKAVELIRQHKNIETILENIDQNKY 268
>AC024791-9|AAF60653.1| 382|Caenorhabditis elegans
Cell-death-related nuclease protein1 protein.
Length = 382
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +3
Query: 147 EMSYGIERFFLLSYCLACCW----PGLGAKNNLRVVRQWAELEFVFPNEEARSY 296
EM +E F L L C + G+G K + ++RQ +E + N + Y
Sbjct: 215 EMKLSVEEFIDLCILLGCDYCGTIRGVGPKKAVELIRQHKNIETILENIDQNKY 268
>Z81147-6|CAB03535.1| 506|Caenorhabditis elegans Hypothetical
protein T09E11.8 protein.
Length = 506
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +1
Query: 130 WMLLNWKC-RTESSDFFYCHIVWRAVGPVS 216
W + W C T SD+FYC + R G VS
Sbjct: 74 WKPIRWFCLNTTCSDYFYCSMATR-FGSVS 102
>Z81097-5|CAB03168.1| 243|Caenorhabditis elegans Hypothetical
protein K07A1.7 protein.
Length = 243
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 141 KLEMSYGIERFFLLSYCLACCWPGLGAKN 227
K E+S RF+L C C W KN
Sbjct: 136 KTEISLDGRRFYLQQLCARCLWSDWSCKN 164
>Z50016-14|CAI06050.2| 177|Caenorhabditis elegans Hypothetical
protein T21C12.8 protein.
Length = 177
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 12 ESARGYIYMYLYKLNK*FYVTFY 80
E+ G Y+Y Y + K F++TF+
Sbjct: 131 ETQNGKRYVYFYSVGKTFFITFF 153
>U41546-4|AAC48218.1| 150|Caenorhabditis elegans Hypothetical
protein T25B6.3 protein.
Length = 150
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 123 QLLDAFKLEMSYGIERFFLLSYCLACCWPGLGAKNNLRVVRQWAELEFV 269
+L + K++MS + F + CW L KN L +W ++EF+
Sbjct: 32 ELNNLAKVDMSSASKELFQ-EFMSTLCWNNLTPKNFLENYIRWEKVEFL 79
>U97406-2|AAC24293.2| 253|Caenorhabditis elegans Hypothetical
protein F40E3.2 protein.
Length = 253
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 281 FVRKHELQF-RPLPHHAEIILRSETGPTARQTI 186
F++K L F + + + E + R E GP ARQT+
Sbjct: 172 FIKKGYLAFTKSVNENDEEVFRYEWGPAARQTV 204
>Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical
protein F19B6.4 protein.
Length = 695
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 176 KKSLDSVRHFQFKSIQQLRILF 111
KKSL S + F F S+Q + +LF
Sbjct: 457 KKSLPSFKGFAFVSVQMMHMLF 478
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,790,245
Number of Sequences: 27780
Number of extensions: 151783
Number of successful extensions: 420
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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