Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0883
         (341 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    42   3e-06
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    31   0.003
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    31   0.005
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    25   0.25 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   0.44 
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    23   1.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   4.1  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          20   7.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   7.2  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    20   7.2  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 41.5 bits (93), Expect = 3e-06
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +3

Query: 219 AKNNLRVVRQWAELEFVFPNEEARSYALEKRFYVPGSSVPI 341
           A+  L+ +  W  LEF FPN  A+  A++   Y+PG+S+PI
Sbjct: 20  AQEKLKNIYSWKALEFAFPNGYAKLAAIKSGSYIPGASLPI 60


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 31.5 bits (68), Expect = 0.003
 Identities = 9/31 (29%), Positives = 22/31 (70%)
 Frame = +3

Query: 249 WAELEFVFPNEEARSYALEKRFYVPGSSVPI 341
           W  L++ +P+E +++ A+ K  Y+P +++P+
Sbjct: 40  WRTLDYAYPDEASKTMAMMKGEYIPENALPV 70


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 30.7 bits (66), Expect = 0.005
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 210 GLGAKNNLRVVRQWAELEFVFPNEEARSYALEKRFYVPGSSVPI 341
           G    N L V+ +W  L++ F N+E R  A++   Y    + P+
Sbjct: 29  GKNLTNTLNVIHKWKYLDYDFDNDERRQAAIQSGEYDRTKNYPL 72


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 25.0 bits (52), Expect = 0.25
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 225 NNLRVVRQWAELEFVFPNEEARSYALEKRFYVPGSSVPI 341
           N  +V  QW   ++ F ++E R  A++   Y   ++VPI
Sbjct: 30  NIFQVKYQWKYFDYNFGSDEKRQAAIQSGEYNYKNNVPI 68


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 24.2 bits (50), Expect = 0.44
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 279  EEARSYALEKRFYVPGSS 332
            E A+SY ++ R +VPG S
Sbjct: 1186 ESAKSYVVDVRVHVPGES 1203


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
 Frame = -3

Query: 255 PPIASPRGDYSSLRDRANSTPNNMTIEKIAR-FRTTFPV 142
           PP  +P     S R R   TP   ++ KI R  R  FP+
Sbjct: 395 PPRQTPPSRKESGRRRRRRTPRYNSVSKIDRASRIVFPL 433


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 222 SLRDRANSTPNNMTIEKIARF 160
           S + + N  PNN  IEK   +
Sbjct: 301 SFKRKVNFYPNNQDIEKFLNY 321


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 272 SERRSPVICIRETILRTWVLGA 337
           SE+R P+   R      WV GA
Sbjct: 76  SEKRIPLYVCRVLHTTVWVAGA 97


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 9/32 (28%), Positives = 12/32 (37%)
 Frame = -2

Query: 250  HCLTTRRLFFAPRPGQQHAKQYDNRKNRSIPY 155
            HC   RR    PR G      +   ++   PY
Sbjct: 1694 HCAPNRRCPPPPRMGSAEGLSHRGMEDEICPY 1725


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 261 PVPPIASPRGD 229
           P+PP+  P+G+
Sbjct: 43  PLPPVTPPQGE 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,472
Number of Sequences: 438
Number of extensions: 1994
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)