Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0882
         (441 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g17050.1 68415.m01968 disease resistance protein (TIR-NBS-LRR...    30   0.80 
At1g67680.1 68414.m07723 expressed protein                             29   1.8  
At1g67650.1 68414.m07720 expressed protein                             29   1.8  
At5g52500.1 68418.m06513 expressed protein strong similarity to ...    28   2.4  
At5g58280.1 68418.m07296 transcriptional factor B3 family protei...    28   3.2  
At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t...    28   3.2  
At5g50710.1 68418.m06283 hypothetical protein                          27   5.6  
At5g50610.1 68418.m06269 hypothetical protein                          27   5.6  
At5g40050.1 68418.m04858 F-box family protein contains F-box dom...    27   7.4  
At4g32060.1 68417.m04563 calcium-binding EF hand family protein ...    26   9.8  
At4g27910.1 68417.m04006 PHD finger protein-related / SET domain...    26   9.8  
At3g26310.1 68416.m03283 cytochrome P450 family protein contains...    26   9.8  
At3g11430.1 68416.m01394 phospholipid/glycerol acyltransferase f...    26   9.8  

>At2g17050.1 68415.m01968 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1355

 Score = 29.9 bits (64), Expect = 0.80
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +2

Query: 59  DRHERLWAAVAIDPKHEEAFKVLESTLSILTNQSEHIQLRIASLHMFLTSQQIRE-NDFI 235
           DRH RLW    I P  E+    L+      T   E I L +++L  F+     +  ++  
Sbjct: 329 DRHVRLWDTSIIQPLLEDEETKLKGESKGTTEDIEVIFLDMSNLKFFVKPDAFKSMHNLR 388

Query: 236 FVHNYISTCNNNQLKRF 286
           F+  Y S    +Q  RF
Sbjct: 389 FLKIYSSNPGKHQRIRF 405


>At1g67680.1 68414.m07723 expressed protein
          Length = 664

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 95  DPKHEEAFKVLESTLSILTNQSEHIQLRIASL 190
           D K+EEA KV +  LSI+    + I+ ++ +L
Sbjct: 33  DTKYEEAVKVADQVLSIVPTDEDAIRCKVVAL 64


>At1g67650.1 68414.m07720 expressed protein
          Length = 651

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 95  DPKHEEAFKVLESTLSILTNQSEHIQLRIASL 190
           D K+EEA KV +  LSI+    + I+ ++ +L
Sbjct: 29  DTKYEEAVKVADQVLSIVPTDEDAIRCKVVAL 60


>At5g52500.1 68418.m06513 expressed protein strong similarity to
           unknown protein (emb|CAB68146.1)
          Length = 363

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +1

Query: 160 GAHSTEDSVAAHVPDVTADQRERLYIRSQLHKHVQQQSIEEVLVYD 297
           G  S  D + AH+  VT +   RL+IR  LH+       + VL+++
Sbjct: 103 GTKSMHDLIIAHIASVTTENDLRLFIR-LLHRSGVTSKSDVVLLFN 147


>At5g58280.1 68418.m07296 transcriptional factor B3 family protein
           contains Pfam profile PF02362: B3 DNA binding domain
          Length = 273

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 15/57 (26%), Positives = 21/57 (36%)
 Frame = +2

Query: 56  RDRHERLWAAVAIDPKHEEAFKVLESTLSILTNQSEHIQLRIASLHMFLTSQQIREN 226
           R RH   WA     P HE  F   E  +      +E  Q  + S H +     +R +
Sbjct: 80  RSRHSSTWATYISRPLHECKFASYEEKVGAF-KAAEKFQRSLKSPHPYFVKSMVRSH 135


>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
           enhancer of zeste-like protein 1(EZA1) (GI:4185507)
           [Arabidopsis thaliana]; similar to polycomb group
           [Arabidopsis thaliana] GI:1903019 (curly leaf); contains
           Pfam profile PF00856: SET domain
          Length = 856

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = -3

Query: 130 FQDLKCLLVLRVDC--HGCPQPLVS 62
           F +L C   L  DC  HGC QPL+S
Sbjct: 261 FDNLFCRRCLVFDCRLHGCSQPLIS 285


>At5g50710.1 68418.m06283 hypothetical protein 
          Length = 185

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +2

Query: 350 YYVPFIVNQVSNPDPLYLLTNNYII 424
           + +P ++N + NP  L++LTN  +I
Sbjct: 59  FTIPRVINYILNPKVLFILTNVIVI 83


>At5g50610.1 68418.m06269 hypothetical protein 
          Length = 185

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +2

Query: 350 YYVPFIVNQVSNPDPLYLLTNNYII 424
           + +P ++N + NP  L++LTN  +I
Sbjct: 59  FTIPRVINYILNPKVLFILTNVIVI 83


>At5g40050.1 68418.m04858 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 415

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 236 FVHNYISTCNNNQLKRFWYT 295
           FV   +S CNNN LK+F  T
Sbjct: 88  FVDKTLSGCNNNSLKKFSLT 107


>At4g32060.1 68417.m04563 calcium-binding EF hand family protein
           contains INTERPRO:IPR002048 calcium-binding EF-hand
           domain
          Length = 498

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 197 FLTSQQIRENDFIFVHNYISTCNNNQLKRFWYTTVKNLMTSK 322
           F+T   I E+ F        T NN ++ +  + TV +LM S+
Sbjct: 237 FVTLLSIPESSFAVAFKMFDTDNNGEIDKEEFKTVMSLMRSQ 278


>At4g27910.1 68417.m04006 PHD finger protein-related / SET
           domain-containing protein (TX4) nearly identical over
           285 amino acids to trithorax 4 [Arabidopsis thaliana]
           GI:16118405; contains Pfam profiles PF00856: SET domain,
           PF00855: PWWP domain; identical to cDNA trithorax 4
           (TX4) partial cds GI:16118404
          Length = 1027

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 35  IIYADSGRDRHERLWAAVAIDPKHEEAFKVLESTL 139
           +++A SGR+  E  W A+ IDP  +    VL S +
Sbjct: 210 LVWAKSGRN--EPFWPAIVIDPMTQAPELVLRSCI 242


>At3g26310.1 68416.m03283 cytochrome P450 family protein contains
           Pfam profile: PF00067 cytochrome P450
          Length = 500

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -3

Query: 106 VLRV-DCHGCPQPLVSVPSTISINDPQVAF 20
           VLRV D H C +P +S P  +S N   +AF
Sbjct: 86  VLRVHDLHCCTRPSLSGPRELSYNYLDIAF 115


>At3g11430.1 68416.m01394 phospholipid/glycerol acyltransferase
           family protein contains Pfam profile: PF01553
           acyltransferase
          Length = 502

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 340 PVVSERFAGHQVLNGRIPEP 281
           P VS+ F GH ++ G+ P+P
Sbjct: 267 PYVSQIFGGHIIVKGKPPQP 286


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,323,375
Number of Sequences: 28952
Number of extensions: 143975
Number of successful extensions: 475
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 702840360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)