Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0881
(621 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1252 - 35748000-35748173,35748243-35748375,35749771-357498... 89 3e-18
05_05_0135 - 22626163-22626198,22626391-22626441,22626516-226266... 87 1e-17
07_03_1205 - 24865991-24866077,24866255-24866259,24867746-24868343 87 1e-17
05_07_0196 + 28352320-28352522,28352679-28352808,28353774-283538... 86 2e-17
03_04_0055 + 16891212-16891848,16893166-16893206 83 1e-16
08_01_0498 - 4327502-4328395 82 3e-16
01_07_0092 - 41021743-41022276 73 2e-13
06_01_1181 + 10148653-10149405 72 3e-13
02_05_0591 - 30183105-30183869 72 4e-13
01_07_0091 - 41013837-41014271 60 1e-09
02_05_0592 - 30210219-30210757,30210898-30210919 38 0.006
08_02_0516 + 18080706-18080760,18081796-18081885,18082479-180825... 38 0.008
03_06_0145 - 31973924-31975837 29 3.9
02_05_1152 + 34494423-34494586,34494725-34494781,34494851-344949... 29 3.9
04_03_0923 + 20843477-20845044,20846081-20846996 28 6.9
>01_06_1252 -
35748000-35748173,35748243-35748375,35749771-35749847,
35750465-35750509,35750584-35750679,35751125-35751130,
35751259-35751388,35751510-35751706
Length = 285
Score = 88.6 bits (210), Expect = 3e-18
Identities = 41/64 (64%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
Frame = +2
Query: 431 LEDENNSDSGSKSNAP-LREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFI 607
+ D + +SGS + +REQDRFLPIANI++IMK+A+P NGKIAKDA+E +QEC+SEFI
Sbjct: 1 MADAGHDESGSPPRSGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFI 60
Query: 608 SFVT 619
SFVT
Sbjct: 61 SFVT 64
>05_05_0135 -
22626163-22626198,22626391-22626441,22626516-22626608,
22627249-22627254,22628051-22628180,22628333-22628583
Length = 188
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/54 (72%), Positives = 46/54 (85%)
Frame = +2
Query: 458 GSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVT 619
G +REQDRFLPIANI++IMK+AIP NGKIAKDA+E VQEC+SEFISF+T
Sbjct: 29 GGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFIT 82
>07_03_1205 - 24865991-24866077,24866255-24866259,24867746-24868343
Length = 229
Score = 86.6 bits (205), Expect = 1e-17
Identities = 40/64 (62%), Positives = 53/64 (82%), Gaps = 4/64 (6%)
Frame = +2
Query: 440 ENNSDSGSKSNA----PLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFI 607
+++++SG SNA REQDRFLPIAN+++IMKRA+P N KI+KDA+E VQEC+SEFI
Sbjct: 3 DSDNESGGPSNAGEYASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFI 62
Query: 608 SFVT 619
SF+T
Sbjct: 63 SFIT 66
>05_07_0196 +
28352320-28352522,28352679-28352808,28353774-28353851,
28355562-28355664,28356109-28356302,28356501-28356518
Length = 241
Score = 85.8 bits (203), Expect = 2e-17
Identities = 38/61 (62%), Positives = 47/61 (77%)
Frame = +2
Query: 437 DENNSDSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFV 616
D + G +EQDRFLPIANI +IM+RA+PENGKIAKD++E VQEC+SEFISF+
Sbjct: 6 DGTENGGGGGGGGVGKEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFI 65
Query: 617 T 619
T
Sbjct: 66 T 66
>03_04_0055 + 16891212-16891848,16893166-16893206
Length = 225
Score = 83.4 bits (197), Expect = 1e-16
Identities = 39/66 (59%), Positives = 53/66 (80%), Gaps = 6/66 (9%)
Frame = +2
Query: 440 ENNSDSGSKSN------APLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISE 601
++++DSG SN + REQDRFLPIAN+++IMK+A+P N KI+KDA+E VQEC+SE
Sbjct: 3 DSDNDSGGPSNYAGGELSSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSE 62
Query: 602 FISFVT 619
FISF+T
Sbjct: 63 FISFIT 68
>08_01_0498 - 4327502-4328395
Length = 297
Score = 82.2 bits (194), Expect = 3e-16
Identities = 34/54 (62%), Positives = 47/54 (87%)
Frame = +2
Query: 458 GSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVT 619
G ++P +EQDRFLPIAN+++IMKR++P N KI+K+++E VQEC+SEFISFVT
Sbjct: 49 GGGGDSPAKEQDRFLPIANVSRIMKRSLPANAKISKESKETVQECVSEFISFVT 102
>01_07_0092 - 41021743-41022276
Length = 177
Score = 72.9 bits (171), Expect = 2e-13
Identities = 30/47 (63%), Positives = 41/47 (87%)
Frame = +2
Query: 479 LREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVT 619
++EQDR LPIAN+ +IMK+ +P N KI+K+A+E +QEC+SEFISFVT
Sbjct: 32 IKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVT 78
>06_01_1181 + 10148653-10149405
Length = 250
Score = 72.1 bits (169), Expect = 3e-13
Identities = 30/49 (61%), Positives = 41/49 (83%)
Frame = +2
Query: 473 APLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVT 619
A +REQDR +PIAN+ +IM+R +P + KI+ DA+E +QEC+SEFISFVT
Sbjct: 27 AVVREQDRLMPIANVIRIMRRVLPPHAKISDDAKEVIQECVSEFISFVT 75
>02_05_0591 - 30183105-30183869
Length = 254
Score = 71.7 bits (168), Expect = 4e-13
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = +2
Query: 440 ENNSDSGSKSNAP-LREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFV 616
+ N + + AP +REQDR +PIAN+ +IM+R +P + KI+ DA+E +QEC+SE+ISF+
Sbjct: 16 DGNGGAQQAAAAPAIREQDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFI 75
Query: 617 T 619
T
Sbjct: 76 T 76
>01_07_0091 - 41013837-41014271
Length = 144
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = +2
Query: 488 QDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVT 619
QD LPIAN+ +IMK +P KI+K A+E +QEC +EFISFVT
Sbjct: 5 QDNLLPIANVGRIMKDGLPPQAKISKRAKETIQECATEFISFVT 48
>02_05_0592 - 30210219-30210757,30210898-30210919
Length = 186
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 416 NSDDVLEDENNSDS--GSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQE 589
N D V + SD GS +NA L P+AN+ +++K+ +P KI A+ +
Sbjct: 11 NMDQVKKAAVRSDGVGGSATNAEL-------PMANLVRLIKKVLPGKAKIGGAAKGLTHD 63
Query: 590 CISEFISFV 616
C EF+ FV
Sbjct: 64 CAVEFVGFV 72
>08_02_0516 +
18080706-18080760,18081796-18081885,18082479-18082573,
18083658-18083726,18083812-18084393
Length = 296
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/45 (33%), Positives = 31/45 (68%)
Frame = +2
Query: 485 EQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVT 619
++D LP + + KI+K +P + ++A+DA++ + EC EFI+ ++
Sbjct: 11 KEDVSLPKSTMFKIIKEMLPPDVRVARDAQDLLVECCVEFINLLS 55
>03_06_0145 - 31973924-31975837
Length = 637
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 362 DLVRLDNGFLVADDTFVVNSDDVLEDENNSDSGSKS 469
D+ +D+G DD VV DV E + D GS S
Sbjct: 262 DMAHVDDGGAATDDNSVVEVTDVAEHTADVDDGSAS 297
>02_05_1152 +
34494423-34494586,34494725-34494781,34494851-34494908,
34494989-34495088,34495270-34495383,34495588-34495810,
34496112-34496246,34496575-34496679,34496906-34497001,
34497387-34497516,34497933-34497983,34498538-34498648,
34499267-34499376,34499490-34499655,34499740-34499820,
34499907-34499975,34500099-34500212,34500699-34500760,
34500894-34500990,34501152-34501271
Length = 720
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 496 IFTNREYS*NNETGNTREWKDSKRCKGMCSGMYIRIHIVCN 618
I+ + YS N+ G + K KRC G+ SG + + +CN
Sbjct: 506 IYLPQRYSPNDIEGKSFCRKTLKRCVGLHSGSSVVVGCICN 546
>04_03_0923 + 20843477-20845044,20846081-20846996
Length = 827
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 491 DRFLPIANIAKIMKRAIPENGKIAKDARECVQECIS 598
D+F P+ +I ++ A EN K+A A EC Q C+S
Sbjct: 356 DKFYPVQSI-RLPHSA--ENVKVATSADECSQACLS 388
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,628,115
Number of Sequences: 37544
Number of extensions: 273398
Number of successful extensions: 621
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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