Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0881
(621 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19569| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_26132| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_12793| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_17082| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_40862| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_12111| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_6876| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_58927| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 29 3.0
SB_13084| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_50135| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_26464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_23611| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 28 5.3
SB_46709| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_42996| Best HMM Match : Neur_chan_memb (HMM E-Value=0.14) 28 5.3
SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_37031| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_24159| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_46352| Best HMM Match : L71 (HMM E-Value=0.19) 28 7.0
SB_13552| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_18782| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_13438| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-24) 27 9.3
SB_10730| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-24) 27 9.3
SB_5651| Best HMM Match : Hexapep (HMM E-Value=0.00035) 27 9.3
SB_4735| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_5856| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
>SB_19569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1
Query: 42 GIFLVPNSCSPGDP 1
G+FL NSCSPGDP
Sbjct: 4 GLFLPSNSCSPGDP 17
>SB_26132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -1
Query: 78 WNHH*LTYDFF*GIFLVPNSCSPGDP 1
W H T+ FF F+ NSCSPGDP
Sbjct: 53 WALH--TFGFFCYSFIGSNSCSPGDP 76
>SB_12793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 39 IFLVPNSCSPGDP 1
+FL+ NSCSPGDP
Sbjct: 14 VFLISNSCSPGDP 26
>SB_17082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 39 IFLVPNSCSPGDP 1
+FL+ NSCSPGDP
Sbjct: 19 LFLISNSCSPGDP 31
>SB_40862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -1
Query: 96 YFVKNLWNHH*LTYDFF*GIFLVPNSCSPGDP 1
+F L + + LTY F F NSCSPGDP
Sbjct: 3 HFTDTLISANILTYSFCIVEFPGSNSCSPGDP 34
>SB_12111| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 42 GIFLVPNSCSPGDP 1
GI L NSCSPGDP
Sbjct: 75 GILLTSNSCSPGDP 88
>SB_6876| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +2
Query: 332 LIMDSDEL---GNDLVRLD-NGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRF 499
+I+D+D + G+D V D + F+V DD V D+V +D +N G N + + D
Sbjct: 270 VIVDNDTVVIVGDDNVADDYDNFIVGDDDNVDGDDNVADDYDNFIVGDDDNVIVGDDDNV 329
Query: 500 L 502
+
Sbjct: 330 I 330
>SB_58927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -1
Query: 39 IFLVPNSCSPGDP 1
I+L+ NSCSPGDP
Sbjct: 6 IYLISNSCSPGDP 18
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 344 SDELGNDLVRLDNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQ 490
++EL ND+V ++ + A+D + + EN D+ K NA L++Q
Sbjct: 892 ANELENDIVAANSDKVQAEDDLYAMQGKIGKLENQIDTLRKQNAQLKDQ 940
>SB_13084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 57 YDFF*GIFLVPNSCSPGDP 1
Y F ++L NSCSPGDP
Sbjct: 3 YPFSTEVYLASNSCSPGDP 21
>SB_50135| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 36 FLVPNSCSPGDP 1
FL+ NSCSPGDP
Sbjct: 16 FLISNSCSPGDP 27
>SB_55025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 341 DSDELGNDLVRLDNGFLVADDTFVVNSDDVLEDENNSDSGS 463
D DE G L+ + ++ DD F V DD + + D GS
Sbjct: 468 DDDEDGGSLMEEETADMMQDDAFAVYEDDNVFLQIRDDGGS 508
>SB_26464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 60 TYDFF*GIFLVPNSCSPGDP 1
T DF F NSCSPGDP
Sbjct: 28 TLDFQNDCFYTSNSCSPGDP 47
>SB_23611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 344 SDELGNDLVRLDNGFLVA-DDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFL 502
SDE G D+ R D+ DD +D +DE + D GS + R + F+
Sbjct: 10 SDEEGEDITREDDDDEEEEDDDEDFEDEDDYDDEYDEDEGSSARRKRRRESGFI 63
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 416 NSDDVLEDENNSDSGSKSNAPLREQDRFLPIANIAKI 526
NSDD+L DEN S S S+A E ++ + N+ K+
Sbjct: 1169 NSDDLLGDENMSSSSLPSDAEFNEFHPWI-VDNVRKL 1204
>SB_46709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Frame = +3
Query: 3 DPPGCRNSARGKSL---KKNHTSVSGDSI 80
DPPGCRNS + +S+ K + +GD I
Sbjct: 17 DPPGCRNSIQARSVDGFAKGYGYCAGDEI 45
>SB_42996| Best HMM Match : Neur_chan_memb (HMM E-Value=0.14)
Length = 190
Score = 28.3 bits (60), Expect = 5.3
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -1
Query: 39 IFLVPNSCSPGDP 1
+F++ NSCSPGDP
Sbjct: 63 VFMLSNSCSPGDP 75
>SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3
Query: 3 DPPGCRNSARGKS 41
DPPGCRNS GK+
Sbjct: 93 DPPGCRNSIAGKN 105
>SB_37031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 347 DELGNDLVRLDNGFLVADDTFVVNSDDVLEDENNSD 454
D++G D+ DN F+V DD + DD +D++N D
Sbjct: 39 DDVG-DIADDDNAFVVLDDDDDDDDDDDDDDDDNDD 73
>SB_24159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1
Query: 42 GIFLVPNSCSPGDP 1
G LV NSCSPGDP
Sbjct: 14 GRLLVSNSCSPGDP 27
>SB_46352| Best HMM Match : L71 (HMM E-Value=0.19)
Length = 179
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 3 DPPGCRNSARGKSLKKN 53
DPPGCRNS + K K++
Sbjct: 17 DPPGCRNSIKDKGEKES 33
>SB_13552| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1
Query: 36 FLVPNSCSPGDP 1
FL+ NSCSPGDP
Sbjct: 6 FLLSNSCSPGDP 17
>SB_27289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 473 APLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFV 616
APL + + LP+ N AKI+ I + K EC+++ + F+
Sbjct: 426 APLTIEGKELPVVNSAKILGLTISNDLKWNDHVLECIKKANKRRLYFI 473
>SB_18782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +2
Query: 335 IMDSDELGNDLVRLDNGFLVADDTFVVNSDDVLED 439
++D D+L +D+ +D L+ DD VV+SD +L+D
Sbjct: 83 VVDGDKLLDDIDVVDGDTLL-DDADVVDSDTLLDD 116
>SB_13438| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-24)
Length = 672
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 466 EQCTAKRTG*IFTNREYS*NNETGNTREWKDSKRCKG 576
+QC +R+ N + S NN T N + +D+ +C G
Sbjct: 626 KQCNGQRSDDTLYNGQLSDNNHTCNRQMSQDTHKCNG 662
>SB_10730| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-24)
Length = 654
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 466 EQCTAKRTG*IFTNREYS*NNETGNTREWKDSKRCKG 576
+QC +R+ N + S NN T N + +D+ +C G
Sbjct: 608 KQCNGQRSDDTLYNGQLSDNNHTCNRQMSQDTHKCNG 644
>SB_5651| Best HMM Match : Hexapep (HMM E-Value=0.00035)
Length = 873
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +2
Query: 335 IMDSDELGNDLVRLDNGFLVADDTFVVNSDDVLED 439
++D D+L +D+ +D L+ DD VV+SD +L+D
Sbjct: 463 VVDGDKLLDDIDVVDGDTLL-DDVDVVDSDTLLDD 496
>SB_4735| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1
Query: 57 YDFF*GIFLVPNSCSPGDP 1
Y F GI ++ NSCSPGDP
Sbjct: 26 YHLF-GIGVLSNSCSPGDP 43
>SB_5856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 63 LTYDFF*GIFLVPNSCSPGDP 1
L F G ++ NSCSPGDP
Sbjct: 16 LDLTFTLGSLIISNSCSPGDP 36
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,573,883
Number of Sequences: 59808
Number of extensions: 352037
Number of successful extensions: 2606
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2596
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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