Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0879
         (602 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IKK6 Cluster: Putative uncharacterized protein; n=2; ...    32   9.1  
UniRef50_A0D156 Cluster: Chromosome undetermined scaffold_34, wh...    32   9.1  

>UniRef50_Q8IKK6 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 807

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
 Frame = +2

Query: 92  NF-YIKSTDLFVG*T--IFSNNKAFNHS--GAFLYPRPRTSLALHQTLSEYC-SIKTERR 253
           NF YIK    F+     + S NK  N +    F Y     S  +   +S+YC SI   ++
Sbjct: 315 NFKYIKKYKYFLSQKNHLKSYNKKRNETLFSIFFYLHWDISKNVLYRISKYCFSIDFIKQ 374

Query: 254 FNRDIIKKTPS*IRQYNLVDLFQRLCKFNSNIFELEQFIIDLN 382
           +   ++KK     R+Y  +  + R+ ++N+N+ E + ++ ++N
Sbjct: 375 YISTLLKKNIRISRKYKNIKKYNRISRYNTNLEEEQSYMDNVN 417


>UniRef50_A0D156 Cluster: Chromosome undetermined scaffold_34, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_34, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1370

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 6/114 (5%)
 Frame = +2

Query: 185  RPRTSLALHQTLSEYCSIKTERRFNRD-IIKKTPS*IRQYNL----VDLFQRLCKFNSNI 349
            R  T LAL  TL+E+ +     +F R   ++K+   + +Y L    V   QRL K N   
Sbjct: 990  RDPTDLALFSTLNEHMAPTFLSQFYRQRFVQKSSLLLEKYGLYLIKVQQLQRL-KMNQKA 1048

Query: 350  FELEQFIID-LNKNKPDSNLAKTKGYLKSIGRLLRN**SRLKFVSNQFRLSMLY 508
             ++ + I+  LNK K D   A   GY+  +         ++K++  Q  ++  Y
Sbjct: 1049 LKILKKIVKILNKTKKDELYAILSGYVTYLNLENSKKPQQIKYLLEQIEINERY 1102


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,312,743
Number of Sequences: 1657284
Number of extensions: 9046369
Number of successful extensions: 21450
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21449
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)