Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0879
         (602 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23448-4|AAS80348.1|  330|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AL132904-11|CAC35844.1|  380|Caenorhabditis elegans Hypothetical...    29   2.6  
AF049709-1|AAC36062.1|  380|Caenorhabditis elegans tyrosylprotei...    29   2.6  
U97189-7|AAK68257.3|  782|Caenorhabditis elegans Hypothetical pr...    29   3.4  

>U23448-4|AAS80348.1|  330|Caenorhabditis elegans Hypothetical
           protein C04A2.1 protein.
          Length = 330

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +2

Query: 356 LEQFIIDLNKNKPDSNLAKTKGYLKSIGRLL 448
           ++Q  +DL +  PD+   KT+G  K++GR L
Sbjct: 110 IKQIKLDLPRTFPDNKFLKTEGTRKTLGRAL 140


>AL132904-11|CAC35844.1|  380|Caenorhabditis elegans Hypothetical
           protein Y111B2A.15 protein.
          Length = 380

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 529 FLVKLIDFYFISVHSEIEPYFSN 597
           FLV  I FYFI+  +  +PY+SN
Sbjct: 12  FLVVFILFYFITARTADDPYYSN 34


>AF049709-1|AAC36062.1|  380|Caenorhabditis elegans tyrosylprotein
           sulfotransferase-A protein.
          Length = 380

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 529 FLVKLIDFYFISVHSEIEPYFSN 597
           FLV  I FYFI+  +  +PY+SN
Sbjct: 12  FLVVFILFYFITARTADDPYYSN 34


>U97189-7|AAK68257.3|  782|Caenorhabditis elegans Hypothetical
           protein C48B6.8 protein.
          Length = 782

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 317 FQRLCKFNSNIFELEQFIIDLNKNKPDSNLA 409
           F +LC +++ I+  E  II  N++ PD  LA
Sbjct: 96  FGKLCIYSAVIYHTEWLIIMTNRSSPDETLA 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,132,117
Number of Sequences: 27780
Number of extensions: 228250
Number of successful extensions: 535
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)