Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0877
(593 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 242 2e-64
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 63 1e-10
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 61 8e-10
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 61 8e-10
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 56 3e-08
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 53 2e-07
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 52 4e-07
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 51 8e-07
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 49 3e-06
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 47 1e-05
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 47 1e-05
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 45 4e-05
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 45 4e-05
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 44 1e-04
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 44 1e-04
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 42 3e-04
SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 42 3e-04
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 42 4e-04
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 42 4e-04
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 42 4e-04
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 41 9e-04
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 9e-04
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 41 9e-04
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 40 0.002
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 40 0.002
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 40 0.002
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_53239| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 36 0.019
SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19) 36 0.025
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 35 0.043
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 35 0.043
SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.043
SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14) 35 0.057
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 35 0.057
SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 33 0.13
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 32 0.30
SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_51317| Best HMM Match : E-MAP-115 (HMM E-Value=0.58) 31 0.70
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 30 1.2
SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027) 30 1.2
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 30 1.6
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 29 2.1
SB_3721| Best HMM Match : RRM_1 (HMM E-Value=3.1) 29 2.1
SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_30685| Best HMM Match : RRM_1 (HMM E-Value=2e-07) 29 2.8
SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021) 29 2.8
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 29 2.8
SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_13859| Best HMM Match : Exonuc_VII_S (HMM E-Value=5.7) 29 3.7
SB_12122| Best HMM Match : DUF573 (HMM E-Value=0.74) 29 3.7
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_40383| Best HMM Match : IQ (HMM E-Value=0.00047) 28 6.5
SB_1431| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 27 8.6
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 242 bits (592), Expect = 2e-64
Identities = 115/197 (58%), Positives = 155/197 (78%), Gaps = 1/197 (0%)
Frame = +1
Query: 4 EAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLK 183
+AA ++I +V+GMLLN K V+VGR++ +KER +++G + K FTNVYVKNFG+D DE +K
Sbjct: 67 DAALEAIARVDGMLLNDKKVFVGRWMSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQMK 126
Query: 184 DMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQ 363
++ + G+I S KVM +G S+GFGFV+FE P+ AE A LNGKE + G+ L+ GRA+
Sbjct: 127 EICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVLNGKE-IGGRRLWAGRAK 185
Query: 364 KKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML 543
K+AER E+K + E+ + ER+ R+QGVNLY+KNLDD IDDERLR+EF+P+GTI+SAKVM
Sbjct: 186 KRAERAAEVKAEIEKKRQERINRFQGVNLYIKNLDDPIDDERLREEFSPYGTISSAKVMK 245
Query: 544 ED-GRSKGFGFVCFSSP 591
+D G SKGFGFVCFSSP
Sbjct: 246 DDKGNSKGFGFVCFSSP 262
Score = 103 bits (248), Expect = 8e-23
Identities = 56/139 (40%), Positives = 82/139 (58%), Gaps = 10/139 (7%)
Frame = +1
Query: 4 EAANKSIEKVNGMLLNGKMVYVGRFIPRKER--------EKELGEKAKLF--TNVYVKNF 153
E A +++ +NG + G+ ++ GR R ER EK+ E+ F N+Y+KN
Sbjct: 160 EEAEEAVNVLNGKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQGVNLYIKNL 219
Query: 154 GEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVE 333
+ DE L++ F YG I+S KVM D GNS+GFGFV F P+ A +A E+NG+ L+
Sbjct: 220 DDPIDDERLREEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMNGRILI- 278
Query: 334 GKPLYVGRAQKKAERQKEL 390
KPLYV AQ++ ER+ +L
Sbjct: 279 SKPLYVALAQRREERKAQL 297
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 65.3 bits (152), Expect = 4e-11
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 2/153 (1%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACI 306
TN+ + S E +K +F G +TS K++ + G S G+ FV +++PD A +A
Sbjct: 27 TNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVR 86
Query: 307 ELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 486
E+NG L + K LK F + S T + NLY+ L + +E
Sbjct: 87 EMNGARL----------------QNKTLKVSFARPSS---TEIKNANLYISGLPKDMKEE 127
Query: 487 RLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCF 582
+ F PFG I ++KV+ + G +G GFV F
Sbjct: 128 EVEALFKPFGKIITSKVLKDVSGEGRGTGFVRF 160
Score = 54.4 bits (125), Expect = 7e-08
Identities = 32/106 (30%), Positives = 52/106 (49%)
Frame = +1
Query: 10 ANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDM 189
ANK++ ++NG L K + V P K N+Y+ +D +E ++ +
Sbjct: 81 ANKAVREMNGARLQNKTLKVSFARPSSTEIKN--------ANLYISGLPKDMKEEEVEAL 132
Query: 190 FEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKEL 327
F+ +G+I + KV+ G RG GFV F+ A+ A +LN K L
Sbjct: 133 FKPFGKIITSKVLKDVSGEGRGTGFVRFDKRCEAQTAIDDLNNKTL 178
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 63.3 bits (147), Expect = 1e-10
Identities = 38/124 (30%), Positives = 73/124 (58%), Gaps = 5/124 (4%)
Frame = +1
Query: 4 EAANKSIEKVNGMLLNGKMVYVGR--FIPR-KEREKELGEKAKLFTNVYVKNFGEDFSDE 174
EAA ++E++NG+LL G+ + VGR +P+ ++ ++AK + +Y+ + D ++
Sbjct: 154 EAAQLALEQMNGVLLGGRNIKVGRPSNVPQAAPLIEQFEQEAKKYARIYIASVHPDLLED 213
Query: 175 MLKDMFEKYGRITSHKVMYKD--DGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLY 348
+K +FE +G++ H + K+ G +G+GF+ +E+ +A A +N +L G+ L
Sbjct: 214 DIKSVFEAFGKVV-HCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMNLFDL-GGQFLR 271
Query: 349 VGRA 360
VGRA
Sbjct: 272 VGRA 275
Score = 54.0 bits (124), Expect = 9e-08
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Frame = +1
Query: 124 LFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGFVAFEDPDAAERA 300
L VYV + + +E ++ F +G I + + + +GF FV ++ P+AA+ A
Sbjct: 100 LMCRVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLA 159
Query: 301 CIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTID 480
++NG L+ G+ + VGR + L +FEQ ++++ R +Y+ ++ +
Sbjct: 160 LEQMNG-VLLGGRNIKVGR-PSNVPQAAPLIEQFEQ-EAKKYAR-----IYIASVHPDLL 211
Query: 481 DERLRKEFAPFGTITSAKVMLE--DGRSKGFGFV 576
++ ++ F FG + + E G+ KG+GF+
Sbjct: 212 EDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFI 245
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 60.9 bits (141), Expect = 8e-10
Identities = 29/83 (34%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACI 306
T +YV + + ++ M+K +FE +G + S +++Y + N S+G+GFV F + +AA+RA
Sbjct: 242 TRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAME 301
Query: 307 ELNGKELVEGKPLYVGRAQKKAE 375
++NG EL G+PL +G ++ +
Sbjct: 302 QMNGFELA-GRPLKIGPVTERGD 323
Score = 59.3 bits (137), Expect = 2e-09
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 3/170 (1%)
Frame = +1
Query: 82 PRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGF 258
P E+ EK + V+ + L++ F K G+++ +++ ++ S+G
Sbjct: 132 PEPMTEESAEEKDQ--RTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGI 189
Query: 259 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQ 438
++ F D A A I L+G++L+ G P+ V Q + R L + E+LK
Sbjct: 190 AYIEFTDKSAVPLA-IGLSGQKLL-GAPIMVMLTQAEKNR---LAAEAERLKQP----LG 240
Query: 439 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCF 582
LYV +L I + ++ F PFGT+ S +++ E RSKG+GFV F
Sbjct: 241 PTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQF 290
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 60.9 bits (141), Expect = 8e-10
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 2/170 (1%)
Frame = +1
Query: 85 RKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHK-VMYKDDGNSRGFG 261
R + + GE+ TN+Y++ + +D+ L + KYG I S K ++ KD +G+G
Sbjct: 85 RMDSLPDTGEEKLSKTNLYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYG 144
Query: 262 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 441
FV FE P +A++A L K + Q ++ ++ EQ
Sbjct: 145 FVDFESPISAQKAVAALVNKGI-----------------QAQMAKQQEQ---------DP 178
Query: 442 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSS 588
NLY++NL D+ L F+ +G + S +++ + D SKG GF S
Sbjct: 179 TNLYIQNLPQNCDEAMLENMFSKYGKVISTRILRDKDTNSKGVGFARMES 228
Score = 60.1 bits (139), Expect = 1e-09
Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 309
TN+Y++N ++ + ML++MF KYG++ S +++ D NS+G GF E + E+ +
Sbjct: 179 TNLYIQNLPQNCDEAMLENMFSKYGKVISTRILRDKDTNSKGVGFARMESAEKCEQVIKD 238
Query: 310 LNGKELVEG--KPLYVGRAQ-KKAERQKELKRKFEQLKSERLTRYQGVNL 450
N K+++ G + L V A +RQ + KR +Q++ + Y NL
Sbjct: 239 FN-KKMLPGCIQELVVKFADGGPKKRQGQAKRYTKQMEDHIVNFYGSENL 287
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +1
Query: 445 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRS--KGFGFVCFSSP 591
NLY++ L D+ L + +GTI S K +L+ + KG+GFV F SP
Sbjct: 101 NLYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFESP 151
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 56.4 bits (130), Expect = 2e-08
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Frame = +1
Query: 82 PRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVM-YKDDGNSRGF 258
P ++ E E + T + V +D +D+ + MFE + + K++ +K G S GF
Sbjct: 31 PALTQQPEPQEAQESKTTLIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGF 90
Query: 259 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQ 438
GFV + + A++A +LNG +G K LK F + + +
Sbjct: 91 GFVDYNTTEDAQKAIDKLNG--------FTIG--------NKVLKVAFSRPGGDNT---K 131
Query: 439 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCF 582
G NLYV N+ + + RK F +G I + +++ + G KG GFV +
Sbjct: 132 GANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLY 181
Score = 44.4 bits (100), Expect = 7e-05
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Frame = +1
Query: 4 EAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLK 183
E A K+I+K+NG + K++ V P + K N+YV N + + +
Sbjct: 99 EDAQKAIDKLNGFTIGNKVLKVAFSRPGGDNTKG--------ANLYVCNIPKQLPEAEFR 150
Query: 184 DMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIELNG 318
FE YG I + +++ K G +G GFV ++ A+ A L+G
Sbjct: 151 KAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYDKKAEAQAAISSLSG 196
Score = 34.3 bits (75), Expect = 0.075
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYK-DDGNSRGFGFVAFEDPDAAERACIEL 312
+YV N G D + E + +F + G + +M+ +GF FV + A+ A L
Sbjct: 277 LYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQTL 336
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQL 411
NG + KPL R + R + K + L
Sbjct: 337 NG-FMYTNKPLQSSRIRTLNRRSRLFKLHYINL 368
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 55.6 bits (128), Expect = 3e-08
Identities = 33/120 (27%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Frame = +1
Query: 79 IPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRG 255
I + ++++ G + +V+V N + S+E LK++F + G + S ++++ ++ G +G
Sbjct: 8 IAQAQQKQSSGAADRSLRSVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKG 67
Query: 256 FGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRY 435
+GF ++D + A A LNG EL G+ L V A +E+ KE + E ++ Y
Sbjct: 68 YGFCEYKDQETALSAMRNLNGYEL-NGRALRVDSA--ASEKNKEEIKSMEMTARPEVSPY 124
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 53.2 bits (122), Expect = 2e-07
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 4/155 (2%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITS-HKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 312
+YV E S+ ++ ++F + G + + H + +G+GFV F + A+ A I++
Sbjct: 15 IYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYA-IKV 73
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 492
V GKP+ R K + K L G NL++ NLD +D++ L
Sbjct: 74 MNMIKVYGKPI---RVNKASAHNKNLD--------------VGANLFIGNLDTEVDEKLL 116
Query: 493 RKEFAPFGTITSAKVMLED---GRSKGFGFVCFSS 588
F+ FG I ++ D G SKGF F+ F+S
Sbjct: 117 YDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFAS 151
Score = 50.4 bits (115), Expect = 1e-06
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Frame = +1
Query: 1 KEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 180
+E A+ +I+ +N + + GK + V + K L A LF + N + +++L
Sbjct: 64 EEDADYAIKVMNMIKVYGKPIRVNK---ASAHNKNLDVGANLF----IGNLDTEVDEKLL 116
Query: 181 KDMFEKYGRIT-SHKVMYKDD-GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVG 354
D F +G I + K+M D GNS+GF F+ F DA++ A +NG+ L +P+ V
Sbjct: 117 YDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLC-NRPITVS 175
Query: 355 RAQKKAER 378
A KK +
Sbjct: 176 YAFKKESK 183
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 52.0 bits (119), Expect = 4e-07
Identities = 29/101 (28%), Positives = 51/101 (50%)
Frame = +1
Query: 37 GMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITS 216
GM GK+ + I KE ++ +Y+++F D L+ +F YG I
Sbjct: 36 GMCAIGKLAEIQHSIQELLSHKEEHDQR----TIYIRDFRPDIRKSSLESVFGPYGAIED 91
Query: 217 HKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGK 339
++ G S+GFG+V +E+ ++A+RA L G +++GK
Sbjct: 92 LSIIRTQTGKSKGFGYVTYENAESAQRA---LAGTHIIDGK 129
Score = 36.3 bits (80), Expect = 0.019
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 385 ELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM-LEDGRSK 561
E++ ++L S + Q +Y+++ I L F P+G I ++ + G+SK
Sbjct: 45 EIQHSIQELLSHKEEHDQRT-IYIRDFRPDIRKSSLESVFGPYGAIEDLSIIRTQTGKSK 103
Query: 562 GFGFVCFSS 588
GFG+V + +
Sbjct: 104 GFGYVTYEN 112
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 50.8 bits (116), Expect = 8e-07
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Frame = +1
Query: 10 ANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDM 189
A +++ K+NG L G V V I K+ K K + + ++N + ++ +LK+
Sbjct: 211 ARQAVAKLNGKTLKG--VKVKAVIESKD--KSSSPKGSKKSRLIIRNLAFNCTEAILKET 266
Query: 190 FEKYGRITSHKVMYKDDGNSR---GFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRA 360
F +G ++ V K G GFGFV F + A +A E+N K+++ G+P+ V A
Sbjct: 267 FSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTNVFDAAKALEEMNAKKIL-GRPVAVDWA 325
Query: 361 QKKA---ERQKELKRKF 402
K+ E Q++ K+ +
Sbjct: 326 VPKSMYTENQEKHKKDY 342
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRI-TSHKVMYKDDGN-SRGFGFVAFEDPDAAERAC 303
T ++V+N + +D K FE+ G + V KD+ N RGFG+V F + A +A
Sbjct: 20 TTIFVRNLPYNITDAEFKSAFEEIGPLKRGFIVKDKDNQNRCRGFGYVTFALEEDALKAK 79
Query: 304 IELNGKELVEGKPLYVGRAQKKA 372
+ ++G+P+++ ++KKA
Sbjct: 80 DNIKS---IKGRPIHLDFSEKKA 99
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +1
Query: 139 YVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNG 318
Y+ N ++ L++ F + + ++ G RGFGFV F + E+A E +G
Sbjct: 8 YIGNLSYSVDEQALEEKFHGCDVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAIDEFDG 67
Query: 319 KELVEGKPLYVGRAQKKAER 378
++ +G+P+ V +AQ + ER
Sbjct: 68 QDF-DGRPMKVNQAQPRGER 86
Score = 33.9 bits (74), Expect = 0.099
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 451 YVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSS 588
Y+ NL ++D++ L ++F + KV+ E GR +GFGFV F S
Sbjct: 8 YIGNLSYSVDEQALEEKFHGCDVV-DVKVITDRETGRPRGFGFVTFGS 54
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/102 (27%), Positives = 53/102 (51%)
Frame = +1
Query: 58 MVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD 237
+V V R+ K++ + ++ +V+V +E LKD FE++G + S ++M
Sbjct: 59 LVAVSRYNSTLPSPKDIEKNSR---SVFVGGLASGTDEEGLKDYFEQFGEVESVRIMRTF 115
Query: 238 DGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQ 363
G SR +GFV F+D ++ L ++ GK + VG+++
Sbjct: 116 LGYSRNYGFVLFKDDGPSKEV---LKKSHVINGKTVDVGKSR 154
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +1
Query: 100 KELGEKAKLFTN--VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAF 273
+E+ E K+ + V++ ED ++ +L ++F K+G + ++ + G SR GFV F
Sbjct: 512 QEVNEGFKMAASFPVWIGGLSEDVTENVLLELFNKFGPVKDVVILRDESGKSRQSGFVHF 571
Query: 274 EDPDAAERACIELNGKELV 330
D AE A + +NG +++
Sbjct: 572 WSSDVAEAANVGMNGCDIL 590
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +1
Query: 319 KELVEGKPLYVGR-AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLR 495
+ L K +Y +Q+K + R F L S+ + +++ L+ +E L+
Sbjct: 8 RRLTSSKIIYPESCSQRKPFQCFSASRPFALLPSKMSESEKLRKIFIGGLNWNTTEEGLK 67
Query: 496 KEFAPFGTITSAKVMLEDGRSKGFGFVCFSS 588
F+ +GTI +M DGRS+GFGFV + S
Sbjct: 68 DYFSQWGTIVDCVIMKRDGRSRGFGFVTYES 98
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +1
Query: 103 ELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDP 282
++ E KL +++ + ++E LKD F ++G I +M K DG SRGFGFV +E
Sbjct: 42 KMSESEKL-RKIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIM-KRDGRSRGFGFVTYESS 99
Query: 283 DA 288
D+
Sbjct: 100 DS 101
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/101 (24%), Positives = 50/101 (49%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
++VK F + ++ L+ FE+YG + K++ G S+G+ F+ FE + A+ +
Sbjct: 10 IFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGVSKGYAFITFESQEVAD-GLRDNK 68
Query: 316 GKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQ 438
G + + K L +G+A ++ + + R F R +Q
Sbjct: 69 GLDF-KDKVLSIGQAVRR-KSSRSYSRHFHWQSGHRQDLFQ 107
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 44.4 bits (100), Expect = 7e-05
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Frame = +1
Query: 118 AKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAER 297
AK +V++ N D +E L FE+ G + +V+ ++ G SRGFG+ F + +
Sbjct: 176 AKEEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVITQE-GRSRGFGYADFTSKEDYNK 234
Query: 298 ACIELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQ-------LKSERLTRYQGVNLY 453
A +ELNG++ G+ + + A K R R + R +L
Sbjct: 235 A-LELNGEDCC-GREIRINPANSKPSRGGGNTPRGGGRGRGGRGGFSGGRDQNPPNSSLI 292
Query: 454 VKNLD-DTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFV 576
V+NL DT D A F ++AKV+ E G S+GFGFV
Sbjct: 293 VRNLSYDTTTDSL----GAAFEGCSNAKVIFDRESGESRGFGFV 332
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/82 (29%), Positives = 45/82 (54%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 309
+++ V+N D + + L FE G + + ++ G SRGFGFV ++D + A++ E
Sbjct: 289 SSLIVRNLSYDTTTDSLGAAFE--GCSNAKVIFDRESGESRGFGFVDYDDVETAKKVLSE 346
Query: 310 LNGKELVEGKPLYVGRAQKKAE 375
+ G E V+G+ + + A + E
Sbjct: 347 MAGAE-VDGRQVRLDFASPRTE 367
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/105 (24%), Positives = 46/105 (43%)
Frame = +1
Query: 274 EDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLY 453
E P E + NGK K + ++ + +K K E ++++
Sbjct: 131 EAPKKKEAPVAKQNGKSKKAKKEESSSESDSDSDEETPTPKKTVPAKEE-------MSVF 183
Query: 454 VKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSS 588
+ NL D+E L F G + +V+ ++GRS+GFG+ F+S
Sbjct: 184 LGNLSFDADEETLAAFFEEKGLSATCRVITQEGRSRGFGYADFTS 228
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +1
Query: 232 KDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER 378
++ G RGFGFV F D ++A + +G++L +G+P+ V +AQ + ER
Sbjct: 44 RETGRPRGFGFVTFGSEDEMDKAIDKFDGEDL-DGRPMKVNKAQPRGER 91
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/92 (27%), Positives = 46/92 (50%)
Frame = +1
Query: 103 ELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDP 282
++GE+ K Y+ N ++ L+D F +Y + + ++ RGF FV F
Sbjct: 225 KMGEECKC----YIGNLDFKVNEADLQDRFSRYDVVDVQVISDRETQRPRGFAFVTFGSK 280
Query: 283 DAAERACIELNGKELVEGKPLYVGRAQKKAER 378
E A EL+G+E +G+ + V +A+ + +R
Sbjct: 281 KNMEDAINELDGQEF-DGRSMKVNQARSREQR 311
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +1
Query: 127 FTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD--DGNSRGFGFVAFEDPDAAERA 300
FT ++V + D+ L+ F ++G I V+ KD S+G+GFV DAAE A
Sbjct: 9 FTKLFVGGIPYESGDDALRKFFAQFGEIRE-AVVIKDRVTKKSKGYGFVTMATSDAAELA 67
Query: 301 CIELNGKELVEGKPLYVGRA 360
C N + ++EG+ V A
Sbjct: 68 C--KNKRPMIEGRQANVNLA 85
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Frame = +1
Query: 166 SDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGFVAFEDPDAAE----RACIELNGKELV 330
S E L+ FEK+G + VM SRGFGF+ F+DP A + EL+GK++V
Sbjct: 120 SAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGKKMV 179
Query: 331 -EGKPLYVGRAQKKAERQKELKRKFEQ 408
K +++G ++++K+ F Q
Sbjct: 180 TTTKKIFIGGLSTNTS-EEDMKKYFSQ 205
Score = 31.5 bits (68), Expect = 0.53
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +1
Query: 484 ERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCFSSP 591
E LR+ F FG + VM + RS+GFGF+ F P
Sbjct: 122 EGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDP 159
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
V+V D ++ L +FE G I ++M +G +RG+ FV + D A+R LN
Sbjct: 76 VFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFNGQNRGYAFVVYTSKDDAKRCVKTLN 135
Query: 316 GKELVEGK 339
E+ +GK
Sbjct: 136 NYEIRKGK 143
>SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 462
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/68 (33%), Positives = 36/68 (52%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 309
+ V+V N + + LKD F+ G + ++M D+ S+G G V FE P A A
Sbjct: 185 STVFVTNLDYKVNWQKLKDTFKCAGHVIRAEIMEDDEKKSKGMGTVQFETPMEAMNAVNL 244
Query: 310 LNGKELVE 333
L+GK L++
Sbjct: 245 LHGKMLMD 252
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/68 (36%), Positives = 35/68 (51%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 309
T +YV N G + L+ FEK+GR++ V N GF FV +ED AE A E
Sbjct: 4 TKLYVGNLGRNADSSELERAFEKFGRLSKVWVA----RNPPGFAFVEYEDYRDAEEAVRE 59
Query: 310 LNGKELVE 333
L+G + +
Sbjct: 60 LDGANVCD 67
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 439 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSS 588
G NL++ +L D L + F PFGT+ SAKV + + SK FGFV + +
Sbjct: 276 GSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDN 327
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/67 (28%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACI 306
+N+++ + ++F+D L F+ +G + S KV N S+ FGFV++++ +A+ A
Sbjct: 277 SNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQ 336
Query: 307 ELNGKEL 327
+NG ++
Sbjct: 337 HMNGFQI 343
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +1
Query: 121 KLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGFVAFEDPDAAER 297
K+ + V++ D ++ L +FE+ G I ++M G ++GF F F + D A+
Sbjct: 149 KVCSQVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQN 208
Query: 298 ACIELNGKELVEGKPLYV 351
A +L+ KE+ GK L V
Sbjct: 209 AVKKLDNKEIRPGKRLGV 226
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/82 (30%), Positives = 45/82 (54%)
Frame = +1
Query: 82 PRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFG 261
P++E + + +K K+ VY++N ++E LK+ + +YG + K + KD +
Sbjct: 316 PQEEPDDDAMKKVKV---VYLRNLSPSITEEKLKEEYSQYGAVDRVKKL-KD------YA 365
Query: 262 FVAFEDPDAAERACIELNGKEL 327
FV F + D A +A E +GKE+
Sbjct: 366 FVHFTERDHALKAIEETDGKEM 387
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 312
++ + G + +DE L F KY K++ K S+G+GFV+F+DP+ +A E+
Sbjct: 219 IFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMREM 278
Query: 313 N 315
N
Sbjct: 279 N 279
Score = 35.9 bits (79), Expect = 0.025
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSSP 591
++ +L + DE L + FA + + AK++ + +SKG+GFV F P
Sbjct: 219 IFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDP 268
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 41.5 bits (93), Expect = 5e-04
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN---------SRGFGFVAFEDPDA 288
VY N + + LK +FE + ++ K+ N SRGFGFV F +P+
Sbjct: 52 VYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFANPED 111
Query: 289 AERACIELNGKELVEGKPLYV 351
A+ A LNGKE V+G+ L +
Sbjct: 112 AQTAVKSLNGKE-VQGRTLKI 131
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 41.1 bits (92), Expect = 7e-04
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Frame = +1
Query: 160 DFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGK 339
D +E +K+MF+KYG + + +GFGF+ + AE A L+
Sbjct: 62 DCDEEEMKEMFKKYGEVAEVFI-----NKEKGFGFIRLDTRLHAEAAKAGLD-------- 108
Query: 340 PLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGT 519
A +K + L+ +F L VKNLD+ + +E L + F+ FG
Sbjct: 109 -----MATRKG---RTLRVRFAT---------HAAALRVKNLDNLVTNELLEQAFSQFGD 151
Query: 520 ITSAKVMLE-DGRSKGFGFVCFS 585
+ A V+ + GRSKG G V FS
Sbjct: 152 VERAVVVCDVRGRSKGHGIVEFS 174
Score = 31.5 bits (68), Expect = 0.53
Identities = 20/92 (21%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +1
Query: 142 VKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGK 321
VKN ++E+L+ F ++G + V+ G S+G G V F + A A +++
Sbjct: 130 VKNLDNLVTNELLEQAFSQFGDVERAVVVCDVRGRSKGHGIVEFSRKNNAHNAMQKISES 189
Query: 322 ELVEG---KPLYVGRAQKKAERQKELKRKFEQ 408
+ G +P+ V + +++ + +++ E+
Sbjct: 190 LFLLGRTPRPISVEQYEQEDDEDGLVEKSVER 221
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACI 306
+ VYV N ++ L +FE+YG++ ++ K+ SRG F+ F D +A+ A
Sbjct: 10 STVYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVA 69
Query: 307 ELNGKEL 327
+N K++
Sbjct: 70 AVNKKQM 76
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/75 (26%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACI 306
T +YV + + + + ++++F YGR+ + + N SRGF +V + DP+ E+A
Sbjct: 1157 TKLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALK 1216
Query: 307 ELNGKELVEGKPLYV 351
++G + ++G+ + V
Sbjct: 1217 HMDGGQ-IDGQEIAV 1230
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 40.7 bits (91), Expect = 9e-04
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Frame = +1
Query: 7 AANKSIEKVNGMLLNGKMVYVGRFIPRKE-REKELGEKAKLFTN-VYVKNFGEDFSDE-M 177
A ++ + LLN Y+G I R E L A + + ++V DF + +
Sbjct: 162 ATRENAMQAKQQLLNTASKYIGGRILRVAFAESNLLTYADVHSRTLFVDRLPRDFKNGGL 221
Query: 178 LKDMFEKYGRITSHKVMYKD-DGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYV 351
+K++F + G +T +V +G SRGF FV + + AE+ NG++ VEG + V
Sbjct: 222 IKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQRAHNGRQ-VEGSNIRV 279
Score = 36.7 bits (81), Expect = 0.014
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 4/155 (2%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGFVAFEDPDAAERACIEL 312
++V N +F++ D+ YG I ++ + G+S+G+GFV + + A +A
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQA---- 170
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 492
++L+ Y+G + L+ F + L+V L + L
Sbjct: 171 -KQQLLNTASKYIG--------GRILRVAFAESNLLTYADVHSRTLFVDRLPRDFKNGGL 221
Query: 493 RKE-FAPFGTITSAKVMLE--DGRSKGFGFVCFSS 588
KE F+ G +T A+V + +G S+GF FV +++
Sbjct: 222 IKELFSQTGNVTFAQVAINPANGGSRGFAFVDYAT 256
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 40.7 bits (91), Expect = 9e-04
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
VYV N +D ++ L D+F KYG I + + G F FV FEDP AE A +
Sbjct: 263 VYVGNLPQDVREKDLHDIFYKYGHIADVDLKNR-RGAGPPFAFVEFEDPRDAEDAVKGRD 321
Query: 316 GKE 324
G E
Sbjct: 322 GHE 324
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGFVAFEDPDAAERACIEL 312
++V + ++E L++ FE YG +T V+ SRGFG+V F D +
Sbjct: 16 LFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKDK 75
Query: 313 --NGKELVEGKPLYVGRA 360
NG ++GK + V RA
Sbjct: 76 VENGAHRIDGKEVEVKRA 93
Score = 40.3 bits (90), Expect = 0.001
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Frame = +1
Query: 46 LNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKV 225
++GK V V R IPR + EK K ++V ED + E +++ E KV
Sbjct: 83 IDGKEVEVKRAIPRDDNSATSHEKTK---KIFVGGLPEDATKEDIQEAIESLLEEKVDKV 139
Query: 226 ---MYKDDGNS-RGFGFVAFEDPDAAERAC----IELNGKELVEGK 339
M K+D RGF FV + D A+ C I + GK +VE K
Sbjct: 140 DLIMKKEDETKHRGFAFVELNNEDQADELCCVKKIHVKGK-MVEAK 184
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/81 (23%), Positives = 42/81 (51%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
++V N D + ++++F K+G + +++ G +G+G+V +E +A A + L+
Sbjct: 173 LFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKPKGYGYVEYEQESSASTAVLTLD 232
Query: 316 GKELVEGKPLYVGRAQKKAER 378
E V+G+ + V + R
Sbjct: 233 KTE-VKGRTISVALSNPPTRR 252
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIE 309
+V++ N D +E L+++F G + S +++ + G +GFG+V FE DA A ++
Sbjct: 57 SVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFA-LK 115
Query: 310 LNGKELVEGKPLYVGRAQKKAERQ 381
+N E +G+ + V ++ K + +
Sbjct: 116 MNNAEF-KGRKIRVFPSKDKPQTE 138
Score = 34.7 bits (76), Expect = 0.057
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +1
Query: 445 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSS 588
++++ NL I++E LR+ F G + S +++ + G KGFG+V F S
Sbjct: 57 SVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFES 106
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/110 (25%), Positives = 53/110 (48%)
Frame = +1
Query: 247 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 426
S+GFGFV+F + A +A E++ + GK + A +K + ++ + +
Sbjct: 553 SKGFGFVSFVRREDAAKAIAEMD-SVTIGGKQVKTNWAARKNNPTQTKPLVWDDVFHQ-- 609
Query: 427 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFV 576
+ +YV NL + D L++ F+ +G+I KV + KG+ F+
Sbjct: 610 SSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFAD----KGYAFI 655
Score = 35.5 bits (78), Expect = 0.033
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Frame = +1
Query: 1 KEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKE---------LGEKAKLFTNVYVKNF 153
+E A K+I +++ + + GK V + RK + + ++L T VYV N
Sbjct: 564 REDAAKAIAEMDSVTIGGKQVKTN-WAARKNNPTQTKPLVWDDVFHQSSQLNTTVYVGNL 622
Query: 154 GEDFSDEMLKDMFEKYGRITSHKVMYKDDG----NSRG 255
D D L+ MF +YG I KV + D G N+RG
Sbjct: 623 PPDVKDYELQQMFSQYGSILETKV-FADKGYAFINARG 659
Score = 31.5 bits (68), Expect = 0.53
Identities = 27/132 (20%), Positives = 56/132 (42%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 312
++YV N + E++ +F K ++ K M + + FV FE A+ A +
Sbjct: 370 SLYVGNLDPKCTQELICSIFNKIAKVVRCK-MINSPTDKGPYCFVEFETHADAQEAKFRM 428
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 492
+ + +++ K ++ + F +++V +L + +D+ L
Sbjct: 429 DQRTVMDKKLKVNWATNHPGMKRGDTNNHF--------------HIFVGDLAENVDNALL 474
Query: 493 RKEFAPFGTITS 528
RK F PFG I++
Sbjct: 475 RKTFEPFGEISA 486
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +1
Query: 232 KDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAE 375
++ G RGFGFV F + E+A E +G++L +G+P+ V A+ + +
Sbjct: 131 RETGRPRGFGFVTFGSKEEMEKAIDEFDGQDL-DGRPMKVNEAKPRGD 177
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
VY+ ++ +K F YGR +++ KD G+GFV F+ D AE A E N
Sbjct: 5 VYLGRLPYGTREDDVKKFFYTYGRFKIREIILKD-----GYGFVEFDYSDDAEDAVYECN 59
Query: 316 GKELV 330
GK+++
Sbjct: 60 GKKML 64
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 439 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVC 579
G NL++ +L D L + F PFGT+ SAKV + + SK FG C
Sbjct: 228 GSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGECC 276
Score = 34.7 bits (76), Expect = 0.057
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +1
Query: 487 RLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSS 588
RL + F PFGT+ SAKV + + SK FGFV + +
Sbjct: 277 RLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDN 312
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 178 LKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIELNGKEL 327
L F+ +G + S KV N S+ FGFV++++ +A+ A +NG ++
Sbjct: 278 LMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQI 328
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 38.7 bits (86), Expect = 0.003
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
+Y+ N + + ++ FE++G + K+ G SRGFGFV + D A IE
Sbjct: 11 LYIGNLNFNSDEGEIEQAFEEFGVEKVDILRDKESGRSRGFGFVLLQSADQIAPA-IEKM 69
Query: 316 GKELVEGKPLYVGRAQKKAERQ 381
+ V G+ + V A K E +
Sbjct: 70 NQSSVGGRNITVALALDKTENR 91
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 436 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCFSS 588
+G LY+ NL+ D+ + + F FG + ++ E GRS+GFGFV S
Sbjct: 7 RGRKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQS 58
>SB_53239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +1
Query: 166 SDEMLKDMFEKYGRITSHKVMY----KDDGNSRGFGFVAFEDPDAAERACIELNGKELV 330
++EML +F KYG + S K+M+ ++ +R GFVA+ ++A L GK+++
Sbjct: 218 NEEMLMRLFGKYGPLASVKIMWPRTEEEKSRNRNCGFVAYMRRKDGDKAIKHLTGKDIM 276
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 36.3 bits (80), Expect = 0.019
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Frame = +1
Query: 139 YVKNFGEDFSDEMLKDMFEKYGRITSHKV-MYKDDGNSRGFGFVAFEDPDAAERACIELN 315
YV E+ +++L F +G IT ++ M RGFGFV FE + A +N
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMN 67
Query: 316 GKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDT 474
EL G+ + V A K + KE + + L ++ G L K+ +T
Sbjct: 68 ESELF-GRTIRVNLA--KPMKIKEGYSRAVWSEDSWLQKHAGQTLEEKDSTET 117
>SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19)
Length = 623
Score = 35.9 bits (79), Expect = 0.025
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 11/147 (7%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 309
T + KN + E L+ +F +G++ +V+ G + + +P A +A +
Sbjct: 424 TVIVAKNLPYGTNAEELRTLFSAFGQLG--RVILPPSGIT---ALIEIPEPSLARKAFQK 478
Query: 310 L------NGKELVEGKPLYV---GRAQKKA--ERQKELKRKFEQLKSERLTRYQGVNLYV 456
L N +E PL V G+ +K + + K+ + EQ +GV L+V
Sbjct: 479 LAYSKFKNSPLYLEWAPLDVFVEGQLKKDSLEKTDKDADQSEEQNAGSDEEDTEGVTLFV 538
Query: 457 KNLDDTIDDERLRKEFAPFGTITSAKV 537
KNL +E L+++FA G + SA +
Sbjct: 539 KNLSFESTEEALKQKFAAVGPVKSATI 565
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 35.5 bits (78), Expect = 0.033
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 309
+ VY+ N G++ S ++ FE +G + V N GF F FED AE A E
Sbjct: 2 SRVYIGNIGDNASKREIEREFETFGPLRDVWVAR----NPPGFAFCVFEDRRDAEDAVRE 57
Query: 310 LNGK 321
L+G+
Sbjct: 58 LDGR 61
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 35.1 bits (77), Expect = 0.043
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 312
++YV+N S+ LK +F KYG+I KV R +GFV F ++A +A +
Sbjct: 3 SIYVRNVPLPMSETQLKAVFTKYGQI--EKVR-----KIRDYGFVYFAKRESAVQAIDGI 55
Query: 313 NGKELVEGKPLYVGRAQKKAER 378
NG ++G L V A ++ R
Sbjct: 56 NG-AYIDGCKLEVSLAIPQSSR 76
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 35.1 bits (77), Expect = 0.043
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSR-GFGFVAFEDPDAAERACIE 309
+V V+N S + LKD F KYG++T Y D R G G V FE D A +
Sbjct: 799 SVIVENLSSRTSWQDLKDYFRKYGKVT-----YADAHKKRIGEGVVEFESKDDLNTAIEK 853
Query: 310 LNGKEL 327
L+ EL
Sbjct: 854 LDDTEL 859
Score = 34.3 bits (75), Expect = 0.075
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 232 KDDGNSRGFGFVAFEDPDAAERACIELNGKELV 330
+D RG+GFV F+D AE A +LNG++L+
Sbjct: 716 RDISLKRGYGFVEFDDHRDAEDAVHDLNGRDLI 748
>SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 35.1 bits (77), Expect = 0.043
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 169 DEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKEL-VEGKPL 345
D++L++++ +++ G +RGFGFV F+ P+AA+ L G L V G +
Sbjct: 345 DDVLQELYAAEVAFRDVRIVRNKIGYTRGFGFVEFDTPEAAKEWMDYLKGGPLKVLGYNI 404
Query: 346 YVGRAQKKAERQKE 387
V ++ K ++K+
Sbjct: 405 GVEYSRPKEGQEKD 418
>SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14)
Length = 273
Score = 34.7 bits (76), Expect = 0.057
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERAC---- 303
++V N D + E + D F G + + K D +S+G GF+ +D +A
Sbjct: 76 LFVGNLPFDLTTEKVLDHFRCAGSSSFRLLTKKTDNSSKGCGFLEIDDSIGYTKALNLHH 135
Query: 304 IELNGKEL-VEGKPLYVGRAQKKAERQKELKRKFEQLKSER 423
L G+++ VE G + K+ E+ +E K+KF++ ++ +
Sbjct: 136 SYLGGRKINVEVTCGGGGSSDKRKEKLQEKKKKFKKKRAAK 176
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 34.7 bits (76), Expect = 0.057
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
VY+ +++ ++ F YGR+ +D +GFV FED A+ A E N
Sbjct: 5 VYLGRLPYGTTEDDVRRFFRSYGRL-------RDINLKNNYGFVEFEDDRDADDAVYECN 57
Query: 316 GKELV 330
GKE++
Sbjct: 58 GKEML 62
>SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 33.5 bits (73), Expect = 0.13
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +1
Query: 91 EREKELGEK--AKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGF 264
E KE+ +K A V+V G ++E+LK+ F G + +V ++ +R GF
Sbjct: 95 EDAKEIAKKLIASGGKTVFVSGIG--LTEEILKEEFNHLGHV--ERVNFE---KNRSQGF 147
Query: 265 VAFEDPDAAERACIELNG 318
V F+ +AA++A E+NG
Sbjct: 148 VTFDTWEAADKAIDEMNG 165
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 250 RGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKK 369
RGFGFV FE ++A++AC L+ K + V +AQ K
Sbjct: 12 RGFGFVTFESENSADKACD--TQYHLINNKKVEVKKAQPK 49
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 33.5 bits (73), Expect = 0.13
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +1
Query: 355 RAQKKAERQKELKRKFEQLKSERLTRYQGVN---LYVKNLDDTIDDERLRKEFAPFGTIT 525
+A A ++K + + ++T+ +GV+ L V L + +++ F FG I
Sbjct: 83 KAADSASKRKIEESPIGKEPETKITKVEGVDVGDLIVLGLPYATTESEMKEYFTRFGEID 142
Query: 526 SAKVMLEDG--RSKGFGFVCF 582
+V L+ RS+GFGFV F
Sbjct: 143 FCEVKLDPNTRRSRGFGFVRF 163
Score = 33.1 bits (72), Expect = 0.17
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 1/142 (0%)
Frame = +1
Query: 166 SDEMLKDMFEKYGRITSHKV-MYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKP 342
++ +K+ F ++G I +V + + SRGFGFV F+ + A+ L+ ++G+
Sbjct: 127 TESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNV---LSTSHRIQGRL 183
Query: 343 LYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTI 522
V L R E+L + L+V L ++ ++ L + FA FG +
Sbjct: 184 CEV-----------RLPRPKEELNVPK-------KLFVGRLPESTTEKTLMEYFAQFGEV 225
Query: 523 TSAKVMLEDGRSKGFGFVCFSS 588
T + + FGFV F+S
Sbjct: 226 TDVYI---PKPFRHFGFVTFAS 244
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 309
T VY+ + G++ S +++ F YG + V N GF F F+D AE A E
Sbjct: 32 TKVYIGSLGDNASKREIENEFGYYGPLKDVWVAR----NPPGFAFCIFDDRRDAEDAVRE 87
Query: 310 LNGK 321
L+G+
Sbjct: 88 LDGR 91
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 32.3 bits (70), Expect = 0.30
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 16/95 (16%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSR----------------GFGFV 267
++V N F D L+ MF +G I +++Y + G+ GFGFV
Sbjct: 70 LHVTNIPFRFRDNDLRQMFGSFGVIADVEIIYNERGSKHAVRFPTRPNPLNLRIEGFGFV 129
Query: 268 AFEDPDAAERACIELNGKELVEGKPLYVGRAQKKA 372
F A +A +LNG +V+G+ + V +++
Sbjct: 130 TFNTAAEANKAREKLNG-TIVDGRKVEVSLCMEQS 163
>SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 31.9 bits (69), Expect = 0.40
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +1
Query: 172 EMLKDMFEKYGRITSHKV-MYKD-DGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL 345
E +++M +K ++ K+ +YK DG+S+G V +EDP A A NGK+ + G+ +
Sbjct: 192 EEVEEMIDK--KLQKPKIWIYKHPDGSSKGECTVTYEDPPTASAAIEWFNGKDFM-GQSI 248
Query: 346 YVGRAQKKAER 378
V A+ + +
Sbjct: 249 KVELAEARTPK 259
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 309
T VY D + L+ YGR+ ++ G+GFV F+D A+ +
Sbjct: 5 TRVYFGRLPRDCRERDLEKFVRGYGRV-------REISMKLGYGFVEFDDYRDADDCVYD 57
Query: 310 LNGKELV 330
LNG+ L+
Sbjct: 58 LNGRNLL 64
>SB_51317| Best HMM Match : E-MAP-115 (HMM E-Value=0.58)
Length = 696
Score = 31.1 bits (67), Expect = 0.70
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 10/145 (6%)
Frame = +1
Query: 97 EKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVA-F 273
+KE A ++ VK+F + S KD EK R+T K +S A
Sbjct: 530 DKEANTVAIFDVSLRVKHFKKRLSLHQQKDFEEKIRRLTERDSQRKGQVDSLKRQLDAET 589
Query: 274 EDPDAAERACI----ELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLK----SERLT 429
D D ++ EL K LV+ + + + + AER +E +R+ +Q K R T
Sbjct: 590 RDKDKWQQQYYTVQEELMKKSLVDEQLSGLDKMARAAERMEEAERRNQQRKPSSQQARDT 649
Query: 430 RYQGVNLYVKNLDDTI-DDERLRKE 501
+NL +LD+ + DD + E
Sbjct: 650 ACSILNLTSNDLDEMMRDDNTMENE 674
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 30.7 bits (66), Expect = 0.93
Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDD--GNSRGFGFVAFEDPDAAERACIE 309
+++ +++ +K++ +G + + ++ KD G S+G+ F + D + A
Sbjct: 675 IFIGGLPNYLNEDQVKELLSSFGELRAFNLV-KDSATGLSKGYAFCEYVDLGITDVAIQG 733
Query: 310 LNGKELVEGKPLYVGRAQKKAER 378
LNG +L + K L V RA A++
Sbjct: 734 LNGMQLGD-KKLIVQRASVGAKQ 755
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 157 EDFSDEMLKDMFEKYGRITSHKVM--YKDDGNSRGFGFVAFEDPDAAERA 300
+DF+DE L+ FE +G I +++ +K N +G+G+V F A A
Sbjct: 62 KDFNDEDLRSKFESFGDIEYVQIVRDHKTREN-KGYGYVKFHKSSTAAMA 110
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 451 YVKNLDDTIDDERLRKEFAPFGTITSAKVM-LEDGRSKGFGFV 576
Y+ NL ++D++ L ++F + + E GR +GFGFV
Sbjct: 85 YIGNLSYSVDEQALEEKFHDCNVVDVRVITDRETGRPRGFGFV 127
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +1
Query: 139 YVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFE 276
Y+ N ++ L++ F + + ++ G RGFGFV E
Sbjct: 85 YIGNLSYSVDEQALEEKFHDCNVVDVRVITDRETGRPRGFGFVTLE 130
>SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027)
Length = 253
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 309
++V + + F +++ ++ EKYG I V + G +V F + AE+A +
Sbjct: 72 SDVEAQEHYDRFFEDVFLELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRYEEDAEKAVND 131
Query: 310 LNGKELVEGKPLY 348
LN + G+P+Y
Sbjct: 132 LNNR-WYNGQPIY 143
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERA 300
T++ V N + E LK +F+KYG + + ++ SRGF FV F + AE A
Sbjct: 16 TSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDA 73
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 247 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQK 366
SRGFGFV E+ + E + +G E EG+ L V A K
Sbjct: 82 SRGFGFVTLENQEDLEDVTRKFDGFE-YEGRRLKVAEASK 120
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDD--GNSRGFGFVAFEDPDAAERACIE 309
+ V N E+ + L+++F G I S + KD S+GF F+ F + A RA
Sbjct: 183 IRVTNLSEETRESDLQELFRPLGPI-SRIFLAKDKFTNQSKGFAFINFVHREDAARAIEV 241
Query: 310 LNG 318
L+G
Sbjct: 242 LSG 244
>SB_3721| Best HMM Match : RRM_1 (HMM E-Value=3.1)
Length = 51
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/51 (25%), Positives = 30/51 (58%)
Frame = +1
Query: 241 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELK 393
G S+G+ +V F + ++ +A + ++ +E +EG+P+++ KA+ K
Sbjct: 3 GRSKGYAYVEFNN-ESTVQAALAMD-REKMEGRPMFISPCVDKAKNPTTFK 51
>SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKE----FAPFGTITSAKVMLEDGRSKGFGFVCF 582
+Y+KNL++ I E L+K F+ FG I V L+ + +G FV F
Sbjct: 9 IYIKNLNEKIKKEELKKSLYAIFSQFGPILDI-VALKTLKMRGQAFVVF 56
>SB_30685| Best HMM Match : RRM_1 (HMM E-Value=2e-07)
Length = 349
Score = 29.1 bits (62), Expect = 2.8
Identities = 31/135 (22%), Positives = 61/135 (45%)
Frame = +1
Query: 82 PRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFG 261
P +E E +KAK T VYVK F ++ + + L++ FE G+I +M + S+ F
Sbjct: 65 PVEELTTEARQKAKAKT-VYVKGFPKEATLDELQEYFEGKGKIVF--IMMRKTLESKEFK 121
Query: 262 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQG 441
F + A + K+ + + + + K +K ++L+ E+ R +
Sbjct: 122 GSVFIEFATLPEAKAFVEEKDTKYQDNVLIKKFKDDYYSVKNADKK-KRLEEEQKARKEE 180
Query: 442 VNLYVKNLDDTIDDE 486
+ VK+ + ++E
Sbjct: 181 IAAQVKSEEKLAEEE 195
>SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021)
Length = 1217
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 319 KELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRK 498
K+ E K + + A+K+ + +KE K K E+ + ER R Y + + + +R R+
Sbjct: 747 KDRKERKKIEMEEAKKREQEEKERKEKEEKERIEREEREAKEREYAERIAKQNEIDRKRR 806
Query: 499 E 501
E
Sbjct: 807 E 807
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/91 (24%), Positives = 44/91 (48%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 309
+ ++V + + + + L+ +FE++G ITS ++ RG ++ E + A RA +
Sbjct: 541 STIWVGHLAKIVTQDTLQGIFEEHGTITSIDLI-----PPRGCAYIQMEKREDAYRALDK 595
Query: 310 LNGKELVEGKPLYVGRAQKKAERQKELKRKF 402
L +L G + + A K + +E K F
Sbjct: 596 LRNIKLY-GNSVKLAWAPAKGVKDREYKEFF 625
>SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 29.1 bits (62), Expect = 2.8
Identities = 26/86 (30%), Positives = 38/86 (44%)
Frame = +1
Query: 244 NSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 423
N+ FGF + DP+A+ RA I L V K L V K E K K ++ +
Sbjct: 84 NAGSFGFCEYSDPEASLRA-IRLLHNLQVGDKSLVVKVDAKTKTLLDEYKAKKKEDRKGE 142
Query: 424 LTRYQGVNLYVKNLDDTIDDERLRKE 501
R G + DD +DD L+++
Sbjct: 143 KKREDG----EADDDDDLDDATLKED 164
>SB_13859| Best HMM Match : Exonuc_VII_S (HMM E-Value=5.7)
Length = 198
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 373 ERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 486
E ++ELK K E+LK E+L Q V + + DD DD+
Sbjct: 35 EEKEELKSKCEKLKEEKLKMEQVVWWWDEYGDDDDDDD 72
>SB_12122| Best HMM Match : DUF573 (HMM E-Value=0.74)
Length = 67
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 358 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTID 480
A++K K K K+ Q+K+ T++ YVKN+ D
Sbjct: 18 ARRKTSLIKNFKTKYRQIKNRLNTKFSRSIRYVKNIGKAFD 58
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/111 (19%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Frame = +1
Query: 112 EKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAA 291
EK + V++ E ++ ++ ++F G ITS ++ N+R F + F ++
Sbjct: 345 EKPEGCRTVFIGGLPESINEHIINEIFYVCGEITSIRISKGKGENARKFCHLRFGAKESV 404
Query: 292 ERAC------IELNGKEL-VEGKPLYVGRAQKKAERQKELKRKFEQLKSER 423
+ A + G+ + +E ++V A + ++Q + Q + ER
Sbjct: 405 DTAVLFSGYRLYTRGENMAIESSRIFVDYAASRDDQQDYERELRAQAREER 455
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 223 VMY-KDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRA 360
V+Y ++ SR FG+V F D A A ++ G E +GK ++ GRA
Sbjct: 7 VVYDRETRRSRNFGYVTFRDEQDAADAMKQMGG-ESGKGKEIF-GRA 51
>SB_40383| Best HMM Match : IQ (HMM E-Value=0.00047)
Length = 841
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 355 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKE 501
R +++AE K QL+ ERL + V + + +T RLR+E
Sbjct: 580 RDRERAESASSKSEKVAQLREERLQSRERVQAFKTDYQETTLRRRLREE 628
>SB_1431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1748
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 361 QKKAERQKELKRKFEQLKSERLTRYQGVNLY-VKNLDDTIDDERLRKEFA 507
Q +E KEL +QL+ + +YQG +LY KN T+ + R A
Sbjct: 552 QDLSETNKELASYIDQLERSQNLQYQGKSLYKAKNKQRTLKEFLSRANLA 601
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 27.5 bits (58), Expect = 8.6
Identities = 25/120 (20%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Frame = +1
Query: 88 KEREKELGEKAKLFTNVYVKNFGE--DFSDEMLKDMFEKYGRI-TSHKVMYKDDGNSRGF 258
KE L K K +Y K E + ++ L + E+Y ++ +++++ + G+ +
Sbjct: 658 KEEISALSAKLKTSEALYEKEKAEIANNHEKELTNFKERYSQLQNNYEILMEQFGDVKEK 717
Query: 259 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQ 438
+ +D ++ + L+ +EL + Y G + + QKE EQ +E+ R +
Sbjct: 718 SEMLAQDMESIK----VLHARELEKLSETYAGDRSRLLQDQKEATENHEQAMTEQRQRLE 773
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +1
Query: 166 SDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVE--GK 339
++E LK++ + I +++G F E CI+ GK++ G
Sbjct: 888 AEEKLKEIHKMLDDIGKLSPSSEEEGEEEKVEFGKTEKSKEDGEKCIDELGKDITSWLGT 947
Query: 340 PLY-VGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDD 471
V RA+K+ +R + + + +T + + YV+ +DD
Sbjct: 948 VFVDVHRAKKELKRTNSEQNRLKNRLDVVITEREALRKYVREVDD 992
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.137 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,009,526
Number of Sequences: 59808
Number of extensions: 306657
Number of successful extensions: 1115
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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