Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0877
         (593 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            26   1.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            26   1.1  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   2.4  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.4  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   7.4  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    23   9.8  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    23   9.8  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   9.8  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 117 LLTKFLFALFAWNESAYINHFTI*QHP 37
           L+ KF + L   + +  INHF I  HP
Sbjct: 689 LIAKFDYTLLQIDSNMLINHFKIHSHP 715


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 117 LLTKFLFALFAWNESAYINHFTI*QHP 37
           L+ KF + L   + +  INHF I  HP
Sbjct: 690 LIAKFDYTLLQIDSNMLINHFKIHSHP 716


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = -1

Query: 350 T*RGLPSTSSLPFNSMQALSAASGSSKATKPKPLELPSSLYITL*LVMRPYFSNISFNIS 171
           T   L + S +  +S   +    G  ++  P P  +P+S+ I    V+ P+ + I FN+S
Sbjct: 458 TPENLINLSDISVSSETVVQVLFGLKRSFTPGPDGIPASVLINCKDVLAPHLAKI-FNLS 516


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 286  AAERACI-ELNGKELVEGKPLYVGRAQKKAERQK 384
            A +RA + ELN K++++ K  Y G+  K   +Q+
Sbjct: 1156 ARDRANMPELNMKQILDYKAAYFGKLPKHQHQQQ 1189


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 319 KELVEGKPLYVGRAQKKAERQKELKRKFEQLKSE 420
           KEL + +P Y    +K+ E  +EL  K EQ + E
Sbjct: 342 KELEQVRPRYEAMRRKEEECSRELNLK-EQKRKE 374


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = +1

Query: 166 SDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKEL 327
           +D  L+ + +   R  S+     D     G  +V++EDPD A      +  K L
Sbjct: 355 ADAPLRKVGDPTKRFGSYAFRLPDSNGEHGV-WVSYEDPDTAGNKAGYVKAKNL 407


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 115 SHQVPFRALCVE*ICLHKPFYHLTTSH 35
           S+  P   LCV  I     F H+T SH
Sbjct: 199 SYACPEHELCVGRIAQELGFQHVTLSH 225


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 115 SHQVPFRALCVE*ICLHKPFYHLTTSH 35
           S+  P   LCV  I     F H+T SH
Sbjct: 199 SYACPEHELCVGRIAQELGFQHVTLSH 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.137    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,115
Number of Sequences: 2352
Number of extensions: 10393
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)