Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0877
(593 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 235 1e-62
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 235 1e-62
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 235 2e-62
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 229 1e-60
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 229 1e-60
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 211 3e-55
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 69 3e-12
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 67 8e-12
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 64 9e-11
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 64 9e-11
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 62 2e-10
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 62 2e-10
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 62 2e-10
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 60 1e-09
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 60 1e-09
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 60 1e-09
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 60 1e-09
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 60 1e-09
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 60 2e-09
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 60 2e-09
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 60 2e-09
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 58 5e-09
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 58 5e-09
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 54 6e-08
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 54 6e-08
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 53 1e-07
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 52 3e-07
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 52 3e-07
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 52 3e-07
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 51 5e-07
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 51 7e-07
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 51 7e-07
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 50 9e-07
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 50 9e-07
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 50 9e-07
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 48 7e-06
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 48 7e-06
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 46 2e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 46 2e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 46 2e-05
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 46 2e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 46 2e-05
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 46 2e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 44 6e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 44 6e-05
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 44 8e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 44 8e-05
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 44 1e-04
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 44 1e-04
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 43 1e-04
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 43 2e-04
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 43 2e-04
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 43 2e-04
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 43 2e-04
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 42 4e-04
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 41 8e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 40 0.001
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 40 0.001
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 40 0.001
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 40 0.001
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 40 0.001
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 39 0.002
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 39 0.002
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 39 0.003
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 39 0.003
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 39 0.003
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 39 0.003
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 39 0.003
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 38 0.004
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 38 0.004
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 38 0.004
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 37 0.009
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 37 0.012
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 36 0.022
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 36 0.029
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 34 0.066
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 34 0.088
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 34 0.088
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 34 0.088
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 33 0.15
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 33 0.15
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 32 0.27
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 32 0.27
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 32 0.27
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 32 0.35
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 31 0.47
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 31 0.47
Z49910-7|CAA90124.4| 384|Caenorhabditis elegans Hypothetical pr... 31 0.62
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 31 0.62
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 31 0.82
U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein... 30 1.1
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 30 1.4
Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF106582-4|AAC78219.1| 456|Caenorhabditis elegans Hypothetical ... 29 3.3
AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical ... 29 3.3
AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical ... 29 3.3
AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix metall... 29 3.3
AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical ... 28 4.4
AF016422-6|AAY86271.1| 128|Caenorhabditis elegans Hypothetical ... 28 4.4
U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical pr... 28 5.8
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z70750-1|CAA94736.2| 362|Caenorhabditis elegans Hypothetical pr... 27 7.6
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 27 7.6
AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear recep... 27 7.6
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 27 7.6
AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine r... 27 7.6
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 27 7.6
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 235 bits (576), Expect = 1e-62
Identities = 119/200 (59%), Positives = 152/200 (76%), Gaps = 3/200 (1%)
Frame = +1
Query: 1 KEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 180
+EAA +I+KVNGMLL GK V+VG+F PR +R +ELGE AK FTNVYVKNFG+ ++ E L
Sbjct: 107 EEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETL 166
Query: 181 KDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGK--PLYVG 354
+ +F K+G ITS +VM +G S+GFGFVAF +P+ AE A L+ +EG L+V
Sbjct: 167 EKLFAKFGNITSCEVM-TVEGKSKGFGFVAFANPEEAETAVQALH-DSTIEGTDLKLHVC 224
Query: 355 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 534
RAQKK+ER ELK+K EQ K+ER+ +YQGVNLYVKNLD+T+DD+ L+K+F +G ITSAK
Sbjct: 225 RAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAK 284
Query: 535 VML-EDGRSKGFGFVCFSSP 591
VM E+GRSKGFGFVCF P
Sbjct: 285 VMTDENGRSKGFGFVCFEKP 304
Score = 120 bits (288), Expect = 1e-27
Identities = 64/153 (41%), Positives = 93/153 (60%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 312
N+++KN + ++ + D F +G I S KV +DG S+G+GFV FE +AA+ A ++
Sbjct: 58 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKV 117
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 492
NG L+ GK ++VG+ Q +A+R +EL T Q N+YVKN D + E L
Sbjct: 118 NGM-LLAGKKVFVGKFQPRAQRNRELGE----------TAKQFTNVYVKNFGDHYNKETL 166
Query: 493 RKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSP 591
K FA FG ITS +VM +G+SKGFGFV F++P
Sbjct: 167 EKLFAKFGNITSCEVMTVEGKSKGFGFVAFANP 199
Score = 96.3 bits (229), Expect = 1e-20
Identities = 51/117 (43%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Frame = +1
Query: 85 RKEREKELGEKAKLF--TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGF 258
+K+ E+ E+ + + N+YVKN E D+ LK FE YG ITS KVM ++G S+GF
Sbjct: 237 KKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGF 296
Query: 259 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERL 426
GFV FE P+ A A E+N K +V KPLYV AQ+K +R+ +L ++ ++L S R+
Sbjct: 297 GFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMRM 352
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 235 bits (576), Expect = 1e-62
Identities = 119/200 (59%), Positives = 152/200 (76%), Gaps = 3/200 (1%)
Frame = +1
Query: 1 KEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 180
+EAA +I+KVNGMLL GK V+VG+F PR +R +ELGE AK FTNVYVKNFG+ ++ E L
Sbjct: 170 EEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETL 229
Query: 181 KDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGK--PLYVG 354
+ +F K+G ITS +VM +G S+GFGFVAF +P+ AE A L+ +EG L+V
Sbjct: 230 EKLFAKFGNITSCEVM-TVEGKSKGFGFVAFANPEEAETAVQALH-DSTIEGTDLKLHVC 287
Query: 355 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 534
RAQKK+ER ELK+K EQ K+ER+ +YQGVNLYVKNLD+T+DD+ L+K+F +G ITSAK
Sbjct: 288 RAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAK 347
Query: 535 VML-EDGRSKGFGFVCFSSP 591
VM E+GRSKGFGFVCF P
Sbjct: 348 VMTDENGRSKGFGFVCFEKP 367
Score = 120 bits (288), Expect = 1e-27
Identities = 64/153 (41%), Positives = 93/153 (60%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 312
N+++KN + ++ + D F +G I S KV +DG S+G+GFV FE +AA+ A ++
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKV 180
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 492
NG L+ GK ++VG+ Q +A+R +EL T Q N+YVKN D + E L
Sbjct: 181 NGM-LLAGKKVFVGKFQPRAQRNRELGE----------TAKQFTNVYVKNFGDHYNKETL 229
Query: 493 RKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSP 591
K FA FG ITS +VM +G+SKGFGFV F++P
Sbjct: 230 EKLFAKFGNITSCEVMTVEGKSKGFGFVAFANP 262
Score = 96.3 bits (229), Expect = 1e-20
Identities = 51/117 (43%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Frame = +1
Query: 85 RKEREKELGEKAKLF--TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGF 258
+K+ E+ E+ + + N+YVKN E D+ LK FE YG ITS KVM ++G S+GF
Sbjct: 300 KKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGF 359
Query: 259 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERL 426
GFV FE P+ A A E+N K +V KPLYV AQ+K +R+ +L ++ ++L S R+
Sbjct: 360 GFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMRM 415
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 235 bits (575), Expect = 2e-62
Identities = 119/200 (59%), Positives = 152/200 (76%), Gaps = 3/200 (1%)
Frame = +1
Query: 1 KEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 180
+EAA +I+KVNGMLL GK V+VG+F PR +R +ELGE AK FTNVYVKNFG+ ++ E L
Sbjct: 170 EEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETL 229
Query: 181 KDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGK--PLYVG 354
+ +F K+G ITS +VM +G S+GFGFVAF +P+ AE A L+ +EG L+V
Sbjct: 230 EKVFAKFGNITSCEVM-TVEGKSKGFGFVAFANPEEAETAVQALH-DSTIEGTDLKLHVC 287
Query: 355 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 534
RAQKK+ER ELK+K EQ K+ER+ +YQGVNLYVKNLD+T+DD+ L+K+F +G ITSAK
Sbjct: 288 RAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAK 347
Query: 535 VML-EDGRSKGFGFVCFSSP 591
VM E+GRSKGFGFVCF P
Sbjct: 348 VMTDENGRSKGFGFVCFEKP 367
Score = 120 bits (289), Expect = 8e-28
Identities = 64/153 (41%), Positives = 93/153 (60%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 312
N+++KN + ++ + D F +G I S KV +DG S+G+GFV FE +AA+ A ++
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKV 180
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 492
NG L+ GK ++VG+ Q +A+R +EL T Q N+YVKN D + E L
Sbjct: 181 NGM-LLAGKKVFVGKFQPRAQRNRELGE----------TAKQFTNVYVKNFGDHYNKETL 229
Query: 493 RKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSP 591
K FA FG ITS +VM +G+SKGFGFV F++P
Sbjct: 230 EKVFAKFGNITSCEVMTVEGKSKGFGFVAFANP 262
Score = 94.3 bits (224), Expect = 6e-20
Identities = 48/110 (43%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
Frame = +1
Query: 85 RKEREKELGEKAKLF--TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGF 258
+K+ E+ E+ + + N+YVKN E D+ LK FE YG ITS KVM ++G S+GF
Sbjct: 300 KKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGF 359
Query: 259 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 408
GFV FE P+ A A E+N K +V KPLYV Q+K +R+ +L ++ Q
Sbjct: 360 GFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIGQRKEDRRAQLASQYMQ 408
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 229 bits (560), Expect = 1e-60
Identities = 118/200 (59%), Positives = 144/200 (72%), Gaps = 3/200 (1%)
Frame = +1
Query: 1 KEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 180
+ +A +IEKVNGMLL+ K VYVG+F PR +R KELGE +TNV+VKNFGE E L
Sbjct: 195 EHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKL 254
Query: 181 KDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGK--PLYVG 354
MF K+G ITS VM G +GFGFVAF D DAA +A +LN ++EG L V
Sbjct: 255 SAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLN-DSILEGTDCKLSVC 313
Query: 355 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 534
RAQKK+ER ELKRK+E LK ER+ RYQGVNLYVKN+++ ++D+ LR F+ FGTITSAK
Sbjct: 314 RAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAK 373
Query: 535 VML-EDGRSKGFGFVCFSSP 591
VM+ E+GRSKGFGFVCF P
Sbjct: 374 VMVDENGRSKGFGFVCFEKP 393
Score = 107 bits (258), Expect = 4e-24
Identities = 61/152 (40%), Positives = 90/152 (59%), Gaps = 1/152 (0%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 312
N+++KN ++ + D F +G I S KV D+GNS+G+GFV FE +A+ A ++
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKV 205
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 492
NG L+ K +YVG+ Q +A+R KEL E +Y N++VKN + +D E+L
Sbjct: 206 NGM-LLSDKKVYVGKFQPRAQRMKEL--------GESGLKY--TNVFVKNFGEHLDQEKL 254
Query: 493 RKEFAPFGTITSAKVMLE-DGRSKGFGFVCFS 585
F+ FG ITSA VM + G+ KGFGFV F+
Sbjct: 255 SAMFSKFGEITSAVVMTDAQGKPKGFGFVAFA 286
Score = 100 bits (240), Expect = 7e-22
Identities = 57/148 (38%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Frame = +1
Query: 1 KEAANKSIEKVNGMLLNGK--MVYVGRFIPRKEREKELGEKAKLF----------TNVYV 144
++AA +++EK+N +L G + V R + ER EL K + N+YV
Sbjct: 288 QDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYV 347
Query: 145 KNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKE 324
KN ED +D+ L+D F +G ITS KVM ++G S+GFGFV FE P+ A A ++N K
Sbjct: 348 KNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSK- 406
Query: 325 LVEGKPLYVGRAQKKAERQKELKRKFEQ 408
++ KPLYV AQ+K +R+ +L ++ Q
Sbjct: 407 MIGAKPLYVALAQRKEDRRAQLASQYMQ 434
Score = 66.5 bits (155), Expect = 1e-11
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 2/154 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 309
++Y+ + D S+ ML + F G + S +V + S G+ +V F+ P AERA
Sbjct: 58 SLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT 117
Query: 310 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 489
+N E++ G+P+ + +Q+ + R N+++KNLD ID++
Sbjct: 118 MNF-EVIHGRPMRIMWSQRDPAAR----------------RAGNGNIFIKNLDRVIDNKS 160
Query: 490 LRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSS 588
+ F+ FG I S KV +D G SKG+GFV F +
Sbjct: 161 VYDTFSLFGNILSCKVATDDEGNSKGYGFVHFET 194
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 229 bits (560), Expect = 1e-60
Identities = 118/200 (59%), Positives = 144/200 (72%), Gaps = 3/200 (1%)
Frame = +1
Query: 1 KEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 180
+ +A +IEKVNGMLL+ K VYVG+F PR +R KELGE +TNV+VKNFGE E L
Sbjct: 195 EHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKL 254
Query: 181 KDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGK--PLYVG 354
MF K+G ITS VM G +GFGFVAF D DAA +A +LN ++EG L V
Sbjct: 255 SAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLN-DSILEGTDCKLSVC 313
Query: 355 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 534
RAQKK+ER ELKRK+E LK ER+ RYQGVNLYVKN+++ ++D+ LR F+ FGTITSAK
Sbjct: 314 RAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAK 373
Query: 535 VML-EDGRSKGFGFVCFSSP 591
VM+ E+GRSKGFGFVCF P
Sbjct: 374 VMVDENGRSKGFGFVCFEKP 393
Score = 107 bits (258), Expect = 4e-24
Identities = 61/152 (40%), Positives = 90/152 (59%), Gaps = 1/152 (0%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 312
N+++KN ++ + D F +G I S KV D+GNS+G+GFV FE +A+ A ++
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKV 205
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 492
NG L+ K +YVG+ Q +A+R KEL E +Y N++VKN + +D E+L
Sbjct: 206 NGM-LLSDKKVYVGKFQPRAQRMKEL--------GESGLKY--TNVFVKNFGEHLDQEKL 254
Query: 493 RKEFAPFGTITSAKVMLE-DGRSKGFGFVCFS 585
F+ FG ITSA VM + G+ KGFGFV F+
Sbjct: 255 SAMFSKFGEITSAVVMTDAQGKPKGFGFVAFA 286
Score = 100 bits (240), Expect = 7e-22
Identities = 57/148 (38%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Frame = +1
Query: 1 KEAANKSIEKVNGMLLNGK--MVYVGRFIPRKEREKELGEKAKLF----------TNVYV 144
++AA +++EK+N +L G + V R + ER EL K + N+YV
Sbjct: 288 QDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYV 347
Query: 145 KNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKE 324
KN ED +D+ L+D F +G ITS KVM ++G S+GFGFV FE P+ A A ++N K
Sbjct: 348 KNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSK- 406
Query: 325 LVEGKPLYVGRAQKKAERQKELKRKFEQ 408
++ KPLYV AQ+K +R+ +L ++ Q
Sbjct: 407 MIGAKPLYVALAQRKEDRRAQLASQYMQ 434
Score = 66.5 bits (155), Expect = 1e-11
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 2/154 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 309
++Y+ + D S+ ML + F G + S +V + S G+ +V F+ P AERA
Sbjct: 58 SLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT 117
Query: 310 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 489
+N E++ G+P+ + +Q+ + R N+++KNLD ID++
Sbjct: 118 MNF-EVIHGRPMRIMWSQRDPAAR----------------RAGNGNIFIKNLDRVIDNKS 160
Query: 490 LRKEFAPFGTITSAKVMLED-GRSKGFGFVCFSS 588
+ F+ FG I S KV +D G SKG+GFV F +
Sbjct: 161 VYDTFSLFGNILSCKVATDDEGNSKGYGFVHFET 194
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 211 bits (515), Expect = 3e-55
Identities = 108/189 (57%), Positives = 139/189 (73%), Gaps = 3/189 (1%)
Frame = +1
Query: 34 NGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT 213
N + N V+VG+F PR +R +ELGE AK FTNVYVKNFG+ ++ E L+ +F K+G IT
Sbjct: 121 NIFIKNLDKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNIT 180
Query: 214 SHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL--YVGRAQKKAERQKE 387
S +VM + G S+GFGFVAF +P+ AE A L+ +EG L +V RAQKK+ER E
Sbjct: 181 SCEVMTVE-GKSKGFGFVAFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAE 238
Query: 388 LKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML-EDGRSKG 564
LK+K EQ K+ER+ +YQGVNLYVKNLD+T+DD+ L+K+F +G ITSAKVM E+GRSKG
Sbjct: 239 LKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKG 298
Query: 565 FGFVCFSSP 591
FGFVCF P
Sbjct: 299 FGFVCFEKP 307
Score = 96.3 bits (229), Expect = 1e-20
Identities = 51/117 (43%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Frame = +1
Query: 85 RKEREKELGEKAKLF--TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGF 258
+K+ E+ E+ + + N+YVKN E D+ LK FE YG ITS KVM ++G S+GF
Sbjct: 240 KKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGF 299
Query: 259 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERL 426
GFV FE P+ A A E+N K +V KPLYV AQ+K +R+ +L ++ ++L S R+
Sbjct: 300 GFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMRM 355
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 68.9 bits (161), Expect = 3e-12
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 1/136 (0%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYK-DDGNSRGFGFVAFEDPDAAERACIE 309
+V+V + +D S+E+LK F K+G ++ KV+ S+G+GFV+F + AE A
Sbjct: 136 HVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAG 195
Query: 310 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 489
+NGK + + A+K +E ++ K FEQ+ + T+ ++YV N+ D
Sbjct: 196 MNGKWIGKRAVRTNWAARKNSEENRD-KLTFEQVFNS--TKADNTSVYVGNISQQTTDAD 252
Query: 490 LRKEFAPFGTITSAKV 537
LR F+ +G I ++
Sbjct: 253 LRDLFSTYGDIAEVRI 268
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 309
T+VYV N + +D L+D+F YG I ++ ++ + FV +E + A +A +E
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRIF-----KTQRYAFVRYEKKECATKAIME 291
Query: 310 LNGKEL 327
+NGKE+
Sbjct: 292 MNGKEM 297
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/56 (32%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = +1
Query: 421 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM--LEDGRSKGFGFVCF 582
R+ + +++V +L + +E L+ F FG ++ AKV+ ++ +SKG+GFV F
Sbjct: 128 RIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSF 183
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 67.3 bits (157), Expect = 8e-12
Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
Frame = +1
Query: 91 EREK-ELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFV 267
ERE LG + +YV N +++ + +F + G +T KV++ DG++ + FV
Sbjct: 32 EREGFHLGNGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIF--DGSNDPYAFV 89
Query: 268 AFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVN 447
F D A +A +N K L+ + + V A + ++Q ++ TR+ +
Sbjct: 90 EFSDHGQASQALQTMN-KRLLLDREMKVNWAVEPGQQQSKIDT----------TRH--FH 136
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCF 582
++V +L +D+++LR+ F PFG ++ AKV+ + +SKG+GFV +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 183
Score = 64.9 bits (151), Expect = 4e-11
Identities = 48/196 (24%), Positives = 104/196 (53%), Gaps = 3/196 (1%)
Frame = +1
Query: 10 ANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDM 189
A+++++ +N LL + + V + +++ ++ + + F +V+V + + ++ L++
Sbjct: 97 ASQALQTMNKRLLLDREMKVNWAVEPGQQQSKI-DTTRHF-HVFVGDLSSEVDNQKLREA 154
Query: 190 FEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQK 366
F+ +G ++ KV+ + S+G+GFV++ + AERA ++NG+ L + + A +
Sbjct: 155 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGR-RTIRTNWATR 213
Query: 367 KAERQKELKRKFEQLKSERLTRYQGVN--LYVKNLDDTIDDERLRKEFAPFGTITSAKVM 540
K Q++ E+ E + G N +YV N+ +DE +R+ FA FG IT ++
Sbjct: 214 KPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTEDE-IRQGFASFGRITEVRIF 272
Query: 541 LEDGRSKGFGFVCFSS 588
+ +G+ FV F +
Sbjct: 273 ----KMQGYAFVKFDN 284
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 63.7 bits (148), Expect = 9e-11
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHK-VMYKDDGNSRGFGFVAFEDPDAAERACI 306
TN+Y++ + +D++L++M KYG I S K +M K N +G+GFV FE P AA A
Sbjct: 107 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVD 166
Query: 307 ELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 486
LN EG + + Q++ + NLY+ NL ++
Sbjct: 167 GLN----TEGVQAQMAKLQQQEQ--------------------DPTNLYIANLPLDFTEQ 202
Query: 487 RLRKEFAPFGTITSAKVM-LEDGRSKGFGFVCFSS 588
L E FG + S +++ D +S+G GF S
Sbjct: 203 MLETELNKFGMVISTRILRTPDNQSRGVGFARMDS 237
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 309
TN+Y+ N DF+++ML+ K+G + S +++ D SRG GF + + E
Sbjct: 188 TNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISA 247
Query: 310 LNG 318
LNG
Sbjct: 248 LNG 250
Score = 41.1 bits (92), Expect = 6e-04
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 427 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRS--KGFGFVCFSSP 591
T NLY++ L +D+ LR+ + +G I S K +++ + KG+GFV F SP
Sbjct: 102 TTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESP 158
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 63.7 bits (148), Expect = 9e-11
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHK-VMYKDDGNSRGFGFVAFEDPDAAERACI 306
TN+Y++ + +D++L++M KYG I S K +M K N +G+GFV FE P AA A
Sbjct: 81 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVD 140
Query: 307 ELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 486
LN EG + + Q++ + NLY+ NL ++
Sbjct: 141 GLN----TEGVQAQMAKLQQQEQ--------------------DPTNLYIANLPLDFTEQ 176
Query: 487 RLRKEFAPFGTITSAKVM-LEDGRSKGFGFVCFSS 588
L E FG + S +++ D +S+G GF S
Sbjct: 177 MLETELNKFGMVISTRILRTPDNQSRGVGFARMDS 211
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 309
TN+Y+ N DF+++ML+ K+G + S +++ D SRG GF + + E
Sbjct: 162 TNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISA 221
Query: 310 LNG 318
LNG
Sbjct: 222 LNG 224
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +1
Query: 427 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRS--KGFGFVCFSSP 591
T NLY++ L +D+ LR+ + +G I S K +++ + KG+GFV F SP
Sbjct: 76 TPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESP 132
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 62.5 bits (145), Expect = 2e-10
Identities = 42/155 (27%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 309
+V+V + + ++ L++ F+ +G ++ KV+ + S+G+GFV++ + AERA +
Sbjct: 23 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 82
Query: 310 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVN--LYVKNLDDTIDD 483
+NG+ L + + A +K Q++ E+ E + G N +YV N+ +D
Sbjct: 83 MNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTED 141
Query: 484 ERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSS 588
E +R+ FA FG IT ++ + +G+ FV F +
Sbjct: 142 E-IRQGFASFGRITEVRIF----KMQGYAFVKFDN 171
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 62.5 bits (145), Expect = 2e-10
Identities = 42/155 (27%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 309
+V+V + + ++ L++ F+ +G ++ KV+ + S+G+GFV++ + AERA +
Sbjct: 33 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 92
Query: 310 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVN--LYVKNLDDTIDD 483
+NG+ L + + A +K Q++ E+ E + G N +YV N+ +D
Sbjct: 93 MNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTED 151
Query: 484 ERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSS 588
E +R+ FA FG IT ++ + +G+ FV F +
Sbjct: 152 E-IRQGFASFGRITEVRIF----KMQGYAFVKFDN 181
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 62.5 bits (145), Expect = 2e-10
Identities = 42/155 (27%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 309
+V+V + + ++ L++ F+ +G ++ KV+ + S+G+GFV++ + AERA +
Sbjct: 104 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 163
Query: 310 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVN--LYVKNLDDTIDD 483
+NG+ L + + A +K Q++ E+ E + G N +YV N+ +D
Sbjct: 164 MNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTED 222
Query: 484 ERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSS 588
E +R+ FA FG IT ++ + +G+ FV F +
Sbjct: 223 E-IRQGFASFGRITEVRIF----KMQGYAFVKFDN 252
Score = 30.7 bits (66), Expect = 0.82
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 549
LYV NLD T+ ++ + F G++T KV+ ++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = +1
Query: 43 LLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT-SH 219
+++GK V R +PR ++ + E +YV ED +++ML + F KYG +T S
Sbjct: 87 IIDGKTVDPKRAVPRDDKNRS--ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSE 144
Query: 220 KVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRK 399
++ K RGFGFV F+D D+ ++ C+ L +V G V + K E K +
Sbjct: 145 IILDKATQKPRGFGFVTFDDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNR 202
Query: 400 FEQLKSER 423
+ + R
Sbjct: 203 DRETRGGR 210
Score = 53.6 bits (123), Expect = 1e-07
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIEL 312
++V + +D+++++ + ++G IT VM SRGFGFV F + A +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 492
+++GK + K+A + + R + ++RL YV + + ++ L
Sbjct: 85 --PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL--------YVSGVREDHTEDML 130
Query: 493 RKEFAPFGTITSAKVMLEDGRSK--GFGFVCF 582
+ F +GT+T ++++L+ K GFGFV F
Sbjct: 131 TEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
Score = 35.9 bits (79), Expect = 0.022
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFS 585
++V L D+ +R+ ++ FG IT VM + RS+GFGFV FS
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFS 72
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = +1
Query: 43 LLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT-SH 219
+++GK V R +PR ++ + E +YV ED +++ML + F KYG +T S
Sbjct: 49 IIDGKTVDPKRAVPRDDKNRS--ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSE 106
Query: 220 KVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRK 399
++ K RGFGFV F+D D+ ++ C+ L +V G V + K E K +
Sbjct: 107 IILDKATQKPRGFGFVTFDDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNR 164
Query: 400 FEQLKSER 423
+ + R
Sbjct: 165 DRETRGGR 172
Score = 47.2 bits (107), Expect = 9e-06
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Frame = +1
Query: 178 LKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVG 354
+++ + ++G IT VM SRGFGFV F + A + +++GK +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR--PHIIDGKTV--- 55
Query: 355 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 534
K+A + + R + ++RL YV + + ++ L + F +GT+T ++
Sbjct: 56 -DPKRAVPRDDKNRSESNVSTKRL--------YVSGVREDHTEDMLTEYFTKYGTVTKSE 106
Query: 535 VMLEDGRSK--GFGFVCF 582
++L+ K GFGFV F
Sbjct: 107 IILDKATQKPRGFGFVTF 124
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 490 LRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFS 585
+R+ ++ FG IT VM + RS+GFGFV FS
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFS 34
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = +1
Query: 43 LLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT-SH 219
+++GK V R +PR ++ + E +YV ED +++ML + F KYG +T S
Sbjct: 49 IIDGKTVDPKRAVPRDDKNRS--ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSE 106
Query: 220 KVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRK 399
++ K RGFGFV F+D D+ ++ C+ L +V G V + K E K +
Sbjct: 107 IILDKATQKPRGFGFVTFDDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNR 164
Query: 400 FEQLKSER 423
+ + R
Sbjct: 165 DRETRGGR 172
Score = 47.2 bits (107), Expect = 9e-06
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Frame = +1
Query: 178 LKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVG 354
+++ + ++G IT VM SRGFGFV F + A + +++GK +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR--PHIIDGKTV--- 55
Query: 355 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 534
K+A + + R + ++RL YV + + ++ L + F +GT+T ++
Sbjct: 56 -DPKRAVPRDDKNRSESNVSTKRL--------YVSGVREDHTEDMLTEYFTKYGTVTKSE 106
Query: 535 VMLEDGRSK--GFGFVCF 582
++L+ K GFGFV F
Sbjct: 107 IILDKATQKPRGFGFVTF 124
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 490 LRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFS 585
+R+ ++ FG IT VM + RS+GFGFV FS
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFS 34
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = +1
Query: 43 LLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT-SH 219
+++GK V R +PR ++ + E +YV ED +++ML + F KYG +T S
Sbjct: 87 IIDGKTVDPKRAVPRDDKNRS--ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSE 144
Query: 220 KVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRK 399
++ K RGFGFV F+D D+ ++ C+ L +V G V + K E K +
Sbjct: 145 IILDKATQKPRGFGFVTFDDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNR 202
Query: 400 FEQLKSER 423
+ + R
Sbjct: 203 DRETRGGR 210
Score = 53.6 bits (123), Expect = 1e-07
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIEL 312
++V + +D+++++ + ++G IT VM SRGFGFV F + A +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 492
+++GK + K+A + + R + ++RL YV + + ++ L
Sbjct: 85 --PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL--------YVSGVREDHTEDML 130
Query: 493 RKEFAPFGTITSAKVMLEDGRSK--GFGFVCF 582
+ F +GT+T ++++L+ K GFGFV F
Sbjct: 131 TEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
Score = 35.9 bits (79), Expect = 0.022
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFS 585
++V L D+ +R+ ++ FG IT VM + RS+GFGFV FS
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFS 72
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = +1
Query: 43 LLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT-SH 219
+++GK V R +PR ++ + E +YV ED +++ML + F KYG +T S
Sbjct: 87 IIDGKTVDPKRAVPRDDKNRS--ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSE 144
Query: 220 KVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRK 399
++ K RGFGFV F+D D+ ++ C+ L +V G V + K E K +
Sbjct: 145 IILDKATQKPRGFGFVTFDDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNR 202
Query: 400 FEQLKSER 423
+ + R
Sbjct: 203 DRETRGGR 210
Score = 53.6 bits (123), Expect = 1e-07
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIEL 312
++V + +D+++++ + ++G IT VM SRGFGFV F + A +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 492
+++GK + K+A + + R + ++RL YV + + ++ L
Sbjct: 85 --PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL--------YVSGVREDHTEDML 130
Query: 493 RKEFAPFGTITSAKVMLEDGRSK--GFGFVCF 582
+ F +GT+T ++++L+ K GFGFV F
Sbjct: 131 TEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
Score = 35.9 bits (79), Expect = 0.022
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFS 585
++V L D+ +R+ ++ FG IT VM + RS+GFGFV FS
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFS 72
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
++V N F D LK MFEK+G ++ ++++ + G S+GFGFV E P AERA EL+
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAERARQELH 213
Query: 316 GKELVEGKPLYVGRAQKKAERQK 384
G ++EG+ + V A + +K
Sbjct: 214 G-SMIEGRKIEVNCATARVHSKK 235
Score = 37.1 bits (82), Expect = 0.009
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSP 591
L+V N+ D L+ F FG ++ +++ + SKGFGFV P
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERP 202
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
++V N F D LK MFEK+G ++ ++++ + G S+GFGFV E P AERA EL+
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAERARQELH 213
Query: 316 GKELVEGKPLYVGRAQKKAERQK 384
G ++EG+ + V A + +K
Sbjct: 214 G-SMIEGRKIEVNCATARVHSKK 235
Score = 37.1 bits (82), Expect = 0.009
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSP 591
L+V N+ D L+ F FG ++ +++ + SKGFGFV P
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERP 202
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 59.7 bits (138), Expect = 2e-09
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
++V N +DE L +F + G + K+++ +G + + FV F D + A A N
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIF--EGLNDPYAFVEFSDHNQATLALQSHN 99
Query: 316 GKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLR 495
G+EL+E K ++V A + E + + K E + +++V +L ID +LR
Sbjct: 100 GRELLE-KEMHVTWAFEPREPGEN------RSKPETSRHF---HVFVGDLCSEIDSTKLR 149
Query: 496 KEFAPFGTITSAKVMLED--GRSKGFGFVCF 582
+ F FG ++ AK++ ++ + KG+GFV +
Sbjct: 150 EAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Frame = +1
Query: 10 ANKSIEKVNGM-LLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKD 186
A +++ NG LL +M F PR+ E + +V+V + + L++
Sbjct: 91 ATLALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLRE 150
Query: 187 MFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIELNG 318
F K+G ++ K++ ++ N +G+GFV++ + AERA E+NG
Sbjct: 151 AFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNG 195
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 58.0 bits (134), Expect = 5e-09
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD--DGNSRGFGFVAFEDPDAAERACIE 309
+YV E S+ +L ++ + G + S M KD N +GFGFV F + A+ A
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVN-MPKDRVTANHQGFGFVEFMGEEDADYAIKI 73
Query: 310 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 489
LN +L GKP+ V +A E+ ++ G N++V NLD +D++
Sbjct: 74 LNMIKLY-GKPIKVNKASAH-EKNMDV----------------GANIFVGNLDPEVDEKL 115
Query: 490 LRKEFAPFGTITSA-KVM--LEDGRSKGFGFVCFSS 588
L F+ FG I K+M ++ G SKGF F+ F+S
Sbjct: 116 LYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFAS 151
Score = 45.2 bits (102), Expect = 4e-05
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = +1
Query: 1 KEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 180
+E A+ +I+ +N + L GK + V + E+ ++G N++V N + +++L
Sbjct: 64 EEDADYAIKILNMIKLYGKPIKVNK-ASAHEKNMDVG------ANIFVGNLDPEVDEKLL 116
Query: 181 KDMFEKYGRITS-HKVMYK-DDGNSRGFGFVAFEDPDAAERACIELNGKEL 327
D F +G I K+M D G S+GF F+ F +A++ A +NG+ L
Sbjct: 117 YDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFL 167
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 58.0 bits (134), Expect = 5e-09
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD--DGNSRGFGFVAFEDPDAAERACIE 309
+YV E S+ +L ++ + G + S M KD N +GFGFV F + A+ A
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVN-MPKDRVTANHQGFGFVEFMGEEDADYAIKI 83
Query: 310 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 489
LN +L GKP+ V +A E+ ++ G N++V NLD +D++
Sbjct: 84 LNMIKLY-GKPIKVNKASAH-EKNMDV----------------GANIFVGNLDPEVDEKL 125
Query: 490 LRKEFAPFGTITSA-KVM--LEDGRSKGFGFVCFSS 588
L F+ FG I K+M ++ G SKGF F+ F+S
Sbjct: 126 LYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFAS 161
Score = 45.2 bits (102), Expect = 4e-05
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = +1
Query: 1 KEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 180
+E A+ +I+ +N + L GK + V + E+ ++G N++V N + +++L
Sbjct: 74 EEDADYAIKILNMIKLYGKPIKVNK-ASAHEKNMDVG------ANIFVGNLDPEVDEKLL 126
Query: 181 KDMFEKYGRITS-HKVMYK-DDGNSRGFGFVAFEDPDAAERACIELNGKEL 327
D F +G I K+M D G S+GF F+ F +A++ A +NG+ L
Sbjct: 127 YDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFL 177
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 54.4 bits (125), Expect = 6e-08
Identities = 28/83 (33%), Positives = 48/83 (57%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
++V N + + L MFEK G + ++++ + G S+GFGFV ++PD A+RA E N
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFN 160
Query: 316 GKELVEGKPLYVGRAQKKAERQK 384
G +EG+ + V A ++ +K
Sbjct: 161 G-TTIEGRRVEVNLATQRVHNKK 182
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSP 591
L+V N+ + L F G + +++ + SKGFGFV +P
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNP 149
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 54.4 bits (125), Expect = 6e-08
Identities = 28/83 (33%), Positives = 48/83 (57%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
++V N + + L MFEK G + ++++ + G S+GFGFV ++PD A+RA E N
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFN 160
Query: 316 GKELVEGKPLYVGRAQKKAERQK 384
G +EG+ + V A ++ +K
Sbjct: 161 G-TTIEGRRVEVNLATQRVHNKK 182
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSP 591
L+V N+ + L F G + +++ + SKGFGFV +P
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNP 149
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 53.2 bits (122), Expect = 1e-07
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Frame = +1
Query: 25 EKVNGMLLNGKMVYVGR--FIPRKEREKELGEKAKLF---TNVYVKNFGEDFSDEMLKDM 189
+K LL ++ GR FI + EK +G K + V+V+N +D+ LK +
Sbjct: 643 QKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKAL 702
Query: 190 FEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKK 369
F K+G +TS + + DG +G FV F D +A+ + C+ K ++ + L V +
Sbjct: 703 FSKFGTVTSVRRVTHKDGKPKGIAFVDF-DTEASAQKCVASGDKLMLRERELEVALSNPP 761
Query: 370 AERQK 384
++ K
Sbjct: 762 VKKDK 766
Score = 48.8 bits (111), Expect = 3e-06
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
++V N +++ ++ E I + D + RGF +V E+ A++A L
Sbjct: 595 IFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDLVH-RGFAYVVMENDQKAQQAL--LK 651
Query: 316 GKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLR 495
+ V+G+P+++ + +K + KF T + ++V+N+ D+ L+
Sbjct: 652 DRVPVKGRPMFISAN----DPEKRVGFKFS-------TTLEKSKVFVRNVHFQATDDELK 700
Query: 496 KEFAPFGTITSA-KVMLEDGRSKGFGFVCFSS 588
F+ FGT+TS +V +DG+ KG FV F +
Sbjct: 701 ALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDT 732
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 53.2 bits (122), Expect = 1e-07
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACI 306
TN+ + + + E ++ +F G I S K++ K G S G+GFV + + A RA
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Query: 307 ELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 486
NG L + K +K + + ++++ +G NLYV + ++
Sbjct: 102 SFNGLRL----------------QNKTIKVSYARPSNDQI---KGSNLYVSGIPKSMTLH 142
Query: 487 RLRKEFAPFGTITSAKVMLED--GRSKGFGFVCF 582
L F PFG I +++++ ++ G SKG GFV F
Sbjct: 143 ELESIFRPFGQIITSRILSDNVTGLSKGVGFVRF 176
Score = 44.4 bits (100), Expect = 6e-05
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 KEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEML 180
+E A +++ NG+ L K + V P ++ K +N+YV + + L
Sbjct: 93 EEDALRAVSSFNGLRLQNKTIKVSYARPSNDQIKG--------SNLYVSGIPKSMTLHEL 144
Query: 181 KDMFEKYGRITSHKVMYKD-DGNSRGFGFVAFEDPDAAERACIELNG 318
+ +F +G+I + +++ + G S+G GFV F+ D A+ A LNG
Sbjct: 145 ESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNG 191
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 52.0 bits (119), Expect = 3e-07
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIE 309
+V+V N D S++ ++ +F K G + S K+++ ++ G +G+GF+ F D AE A
Sbjct: 19 SVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 310 LNGKELVEGKPLYVGRA 360
LNG EL G+ L V A
Sbjct: 79 LNGYEL-SGRILRVDSA 94
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +1
Query: 445 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVM--LEDGRSKGFGFVCF 582
+++V N+ + ++ +R F+ G + S K++ E G+ KG+GF+ F
Sbjct: 19 SVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 52.0 bits (119), Expect = 3e-07
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 309
T+V V+N ++M++D+FE +GRI + + +RGF + F + D A+++C +
Sbjct: 127 THVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQ 186
Query: 310 LNGKELVEGKPLYVG-RAQKKAERQKELKRKFEQLKSERLTRYQGVNL 450
LN EL G+ + + + + +A K+ + Q + + QG +L
Sbjct: 187 LNNFELA-GRCIRLSIKQESQAPAVKKEEASIHQRSLDDVGDRQGFSL 233
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 52.0 bits (119), Expect = 3e-07
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 309
T+V V+N ++M++D+FE +GRI + + +RGF + F + D A+++C +
Sbjct: 272 THVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQ 331
Query: 310 LNGKELVEGKPLYVG-RAQKKAERQKELKRKFEQLKSERLTRYQGVNL 450
LN EL G+ + + + + +A K+ + Q + + QG +L
Sbjct: 332 LNNFELA-GRCIRLSIKQESQAPAVKKEEASIHQRSLDDVGDRQGFSL 378
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 52.0 bits (119), Expect = 3e-07
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIEL 312
V+ + G + SDE+L F KY KV+ + N S+G+GFV+F D + RA E+
Sbjct: 205 VFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREM 264
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLK 414
+GK V +P+ + ++ K +K+K +Q K
Sbjct: 265 DGK-YVGNRPIKLRKSAWKERNIDVIKQKRKQKK 297
Score = 33.9 bits (74), Expect = 0.088
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED--GRSKGFGFVCF 582
++ +L + + DE L K F + + AKV+ E +SKG+GFV F
Sbjct: 205 VFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSF 251
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 51.2 bits (117), Expect = 5e-07
Identities = 25/66 (37%), Positives = 41/66 (62%)
Frame = +1
Query: 187 MFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQK 366
MFEK G + ++++ + G S+GFGFV ++PD A+RA E NG +EG+ + V A +
Sbjct: 1 MFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFNG-TTIEGRRVEVNLATQ 58
Query: 367 KAERQK 384
+ +K
Sbjct: 59 RVHNKK 64
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 502 FAPFGTITSAKVMLEDGRSKGFGFVCFSSP 591
F G + +++ + SKGFGFV +P
Sbjct: 2 FEKVGPVVDVEIIFNERGSKGFGFVTMQNP 31
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical protein
T23F6.4 protein.
Length = 872
Score = 50.8 bits (116), Expect = 7e-07
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Frame = +1
Query: 85 RKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEK-YGRITSHKVMYKDDGN----- 246
+K+ EKE+ + LF VKN D +D L+ +F K YG + + K
Sbjct: 630 KKQSEKEIESGSTLF----VKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTK 685
Query: 247 --SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSE 420
S GFGFV F A+ A ++ G EL++G L + + ++ + LKRK + K +
Sbjct: 686 PLSMGFGFVQFYTAFDAKTALKDMQG-ELLDGHSLELKISHRENADKGALKRKEVKQKEQ 744
Query: 421 RLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRS---KGFGFVCFSS 588
+ L V+NL + + F FG + + ++ + G+ +GFGFV F S
Sbjct: 745 G----ECTKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFIS 799
Score = 50.4 bits (115), Expect = 9e-07
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 309
T + VKN +++ L+ FEKYG+I+ + Y +G RGF FV F D +A A +
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAK 62
Query: 310 LN 315
N
Sbjct: 63 SN 64
Score = 41.5 bits (93), Expect = 4e-04
Identities = 26/102 (25%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +1
Query: 85 RKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFG 261
R + E+ + EK ++++N ++ L+ +F+KYG ++ +V+ K G +GF
Sbjct: 264 RDKEEETVREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFA 323
Query: 262 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKE 387
V F P+AA A L+G + +G+ +++ +K ++ E
Sbjct: 324 IVEFVFPEAAVAAYSALDG-YVFKGRMMHILPGDEKRTKEGE 364
Score = 41.5 bits (93), Expect = 4e-04
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Frame = +1
Query: 79 IPRKE-REKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNS-- 249
+ RKE ++KE GE KL V+N + S + ++ +FE +G + + ++ K
Sbjct: 734 LKRKEVKQKEQGECTKLL----VRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQH 789
Query: 250 RGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRK 399
RGFGFV F D A RA L + G+ L + A K E +EL+ K
Sbjct: 790 RGFGFVDFISADEAHRAFDSLVHSTHLYGRRLVLEWA-KDDETVEELREK 838
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRSKGFGFVCF 582
L VKNL T +++LRK F +G I+ A + ++G+ +GF FV F
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGF 50
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 50.8 bits (116), Expect = 7e-07
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +1
Query: 97 EKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAF 273
E +G + +FT ++V SD+ L + FE++G I V+ ++ SRG+GFV
Sbjct: 24 EPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTM 83
Query: 274 EDPDAAERACIELNGKELVEGKPLYVGRA 360
+D +AERAC + N +++G+ V A
Sbjct: 84 KDRASAERACKDPN--PIIDGRKANVNLA 110
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 50.4 bits (115), Expect = 9e-07
Identities = 37/171 (21%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Frame = +1
Query: 88 KEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGF 264
++R++ + + + +YV + + ++ML+ F+ +G I S + + G+ + F F
Sbjct: 88 QQRQQMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAF 147
Query: 265 VAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKSERLTRYQG 441
V +E P+AA A +NG +++ G+ L V + R + + + + + +
Sbjct: 148 VEYEVPEAALLAQESMNG-QMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKY 206
Query: 442 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRS-KGFGFVCFSS 588
+YV ++ + + L+ F FG I ++ GR +GFG++ F++
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 41.9 bits (94), Expect = 3e-04
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Frame = +1
Query: 4 EAANKSIEKVNGMLLNGKMVYVGRFI----------PRKEREKELGEK-AKLFTNVYVKN 150
EAA + E +NG +L G+ + V + P+ + ++ +K AK + VYV +
Sbjct: 154 EAALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSS 213
Query: 151 FGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNS-RGFGFVAFEDPDAAERACIELN 315
D S+ LK +FE +G I ++ G RGFG++ F + + A +N
Sbjct: 214 VHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
Score = 34.7 bits (76), Expect = 0.050
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 367 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 546
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S + +
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWD 136
Query: 547 --DGRSKGFGFVCFSSP 591
G K F FV + P
Sbjct: 137 PATGHHKTFAFVEYEVP 153
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 50.4 bits (115), Expect = 9e-07
Identities = 37/171 (21%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Frame = +1
Query: 88 KEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGF 264
++R++ + + + +YV + + ++ML+ F+ +G I S + + G+ + F F
Sbjct: 88 QQRQQMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAF 147
Query: 265 VAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKSERLTRYQG 441
V +E P+AA A +NG +++ G+ L V + R + + + + + +
Sbjct: 148 VEYEVPEAALLAQESMNG-QMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKY 206
Query: 442 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRS-KGFGFVCFSS 588
+YV ++ + + L+ F FG I ++ GR +GFG++ F++
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 44.0 bits (99), Expect = 8e-05
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 12/130 (9%)
Frame = +1
Query: 4 EAANKSIEKVNGMLLNGKMVYVGRFI----------PRKEREKELGEK-AKLFTNVYVKN 150
EAA + E +NG +L G+ + V + P+ + ++ +K AK + VYV +
Sbjct: 154 EAALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSS 213
Query: 151 FGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNS-RGFGFVAFEDPDAAERACIELNGKEL 327
D S+ LK +FE +G I ++ G RGFG++ F + + A +N +L
Sbjct: 214 VHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDL 273
Query: 328 VEGKPLYVGR 357
G+ L VG+
Sbjct: 274 -GGQYLRVGK 282
Score = 34.7 bits (76), Expect = 0.050
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 367 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 546
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S + +
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWD 136
Query: 547 --DGRSKGFGFVCFSSP 591
G K F FV + P
Sbjct: 137 PATGHHKTFAFVEYEVP 153
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 50.4 bits (115), Expect = 9e-07
Identities = 37/171 (21%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Frame = +1
Query: 88 KEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGF 264
++R++ + + + +YV + + ++ML+ F+ +G I S + + G+ + F F
Sbjct: 88 QQRQQMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAF 147
Query: 265 VAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKSERLTRYQG 441
V +E P+AA A +NG +++ G+ L V + R + + + + + +
Sbjct: 148 VEYEVPEAALLAQESMNG-QMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKY 206
Query: 442 VNLYVKNLDDTIDDERLRKEFAPFGTITSAKV-MLEDGRS-KGFGFVCFSS 588
+YV ++ + + L+ F FG I ++ GR +GFG++ F++
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 44.0 bits (99), Expect = 8e-05
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 12/130 (9%)
Frame = +1
Query: 4 EAANKSIEKVNGMLLNGKMVYVGRFI----------PRKEREKELGEK-AKLFTNVYVKN 150
EAA + E +NG +L G+ + V + P+ + ++ +K AK + VYV +
Sbjct: 154 EAALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSS 213
Query: 151 FGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNS-RGFGFVAFEDPDAAERACIELNGKEL 327
D S+ LK +FE +G I ++ G RGFG++ F + + A +N +L
Sbjct: 214 VHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDL 273
Query: 328 VEGKPLYVGR 357
G+ L VG+
Sbjct: 274 -GGQYLRVGK 282
Score = 34.7 bits (76), Expect = 0.050
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +1
Query: 367 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 546
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S + +
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWD 136
Query: 547 --DGRSKGFGFVCFSSP 591
G K F FV + P
Sbjct: 137 PATGHHKTFAFVEYEVP 153
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIE 309
+VYV N ++E L + F G+I + +++ ++ G RGF F+ F + +A+RA +
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 310 LNGKELVEGKPLYVGRAQK 366
+NG E G+PL V A K
Sbjct: 66 MNGAEF-NGRPLRVNLANK 83
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 47.6 bits (108), Expect = 7e-06
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
+YV N F ++ L MF YGR+ S +++ D G S+GFGFV + ++ E+A L+
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG-SKGFGFVTLDSIESCEKARAALH 111
Query: 316 GKELVEGKPLYVGRA 360
+ V+G+ + V RA
Sbjct: 112 -ESHVQGRIIEVRRA 125
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSS 588
+YV N+ + ++ L F +G + S +++ D SKGFGFV S
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDS 99
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 47.6 bits (108), Expect = 7e-06
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
+YV N F ++ L MF YGR+ S +++ D G S+GFGFV + ++ E+A L+
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG-SKGFGFVTLDSIESCEKARAALH 111
Query: 316 GKELVEGKPLYVGRA 360
+ V+G+ + V RA
Sbjct: 112 -ESHVQGRIIEVRRA 125
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSS 588
+YV N+ + ++ L F +G + S +++ D SKGFGFV S
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDS 99
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 316 GKELVEG--KPLYVGRAQKKAERQKELKRK 399
+ +EG PL V A ++ K++K K
Sbjct: 204 HSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
Score = 43.2 bits (97), Expect = 1e-04
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 2/153 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 312
++V +++ + +FEKYG + S ++ K S+G FV F A A L
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 492
+ +++EG ++ K A+ + +RK L++ L ++E L
Sbjct: 117 HNIKVIEG--MHHPVQMKPADTENRNERK----------------LFIGQLSKKHNEENL 158
Query: 493 RKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSS 588
R+ FA FG I V+ + DG+S+G FV F++
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTN 191
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 309
N+++ + +DF D L + F +G I S KV N S+ FGFV++E+ +A A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 310 LNGKEL 327
+NG ++
Sbjct: 560 MNGFQI 565
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 439 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSS 588
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + +
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 316 GKELVEG--KPLYVGRAQKKAERQKELKRK 399
+ +EG PL V A ++ K++K K
Sbjct: 204 HSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
Score = 43.2 bits (97), Expect = 1e-04
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 2/153 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 312
++V +++ + +FEKYG + S ++ K S+G FV F A A L
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 492
+ +++EG ++ K A+ + +RK L++ L ++E L
Sbjct: 117 HNIKVIEG--MHHPVQMKPADTENRNERK----------------LFIGQLSKKHNEENL 158
Query: 493 RKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSS 588
R+ FA FG I V+ + DG+S+G FV F++
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTN 191
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 309
N+++ + +DF D L + F +G I S KV N S+ FGFV++E+ +A A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 310 LNGKEL 327
+NG ++
Sbjct: 560 MNGFQI 565
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 439 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSS 588
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + +
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 316 GKELVEG--KPLYVGRAQKKAERQKELKRK 399
+ +EG PL V A ++ K++K K
Sbjct: 204 HSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
Score = 43.2 bits (97), Expect = 1e-04
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 2/153 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 312
++V +++ + +FEKYG + S ++ K S+G FV F A A L
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 492
+ +++EG ++ K A+ + +RK L++ L ++E L
Sbjct: 117 HNIKVIEG--MHHPVQMKPADTENRNERK----------------LFIGQLSKKHNEENL 158
Query: 493 RKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSS 588
R+ FA FG I V+ + DG+S+G FV F++
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTN 191
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 309
N+++ + +DF D L + F +G I S KV N S+ FGFV++E+ +A A
Sbjct: 429 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 488
Query: 310 LNGKEL 327
+NG ++
Sbjct: 489 MNGFQI 494
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 439 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSS 588
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + +
Sbjct: 427 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 478
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 316 GKELVEG--KPLYVGRAQKKAERQKELKRK 399
+ +EG PL V A ++ K++K K
Sbjct: 204 HSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
Score = 43.2 bits (97), Expect = 1e-04
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 2/153 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 312
++V +++ + +FEKYG + S ++ K S+G FV F A A L
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 492
+ +++EG ++ K A+ + +RK L++ L ++E L
Sbjct: 117 HNIKVIEG--MHHPVQMKPADTENRNERK----------------LFIGQLSKKHNEENL 158
Query: 493 RKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSS 588
R+ FA FG I V+ + DG+S+G FV F++
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTN 191
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 316 GKELVEG--KPLYVGRAQKKAERQKELKRK 399
+ +EG PL V A ++ K++K K
Sbjct: 204 HSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
Score = 43.2 bits (97), Expect = 1e-04
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 2/153 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 312
++V +++ + +FEKYG + S ++ K S+G FV F A A L
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 492
+ +++EG ++ K A+ + +RK L++ L ++E L
Sbjct: 117 HNIKVIEG--MHHPVQMKPADTENRNERK----------------LFIGQLSKKHNEENL 158
Query: 493 RKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSS 588
R+ FA FG I V+ + DG+S+G FV F++
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTN 191
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 309
N+++ + +DF D L + F +G I S KV N S+ FGFV++E+ +A A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 310 LNGKEL 327
+NG ++
Sbjct: 560 MNGFQI 565
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 439 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSS 588
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + +
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 549
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 46.0 bits (104), Expect = 2e-05
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Frame = +1
Query: 172 EMLKDMFEKYGRITSHKVMYKDDGN--SRGFGFVAFEDPDAAERACIELNGKE-LVEGKP 342
E L+D F ++G + VM +D +RGFGF+ F DP + ++ LN +E ++GK
Sbjct: 59 ENLRDYFGRFGEVNECMVM-RDPATKRARGFGFITFVDPSSVDKV---LNNREHELDGK- 113
Query: 343 LYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTI 522
+ K K + K +T+ + V ++ L T E +++ F +G +
Sbjct: 114 ----KIDPKVAFPKRTQAKL-------VTKTKKV--FIGGLSATSTLEDMKQYFETYGKV 160
Query: 523 TSAKVMLEDG--RSKGFGFVCFSS 588
A +M + R +GFGFV F S
Sbjct: 161 EDAMLMFDKATQRHRGFGFVTFDS 184
Score = 46.0 bits (104), Expect = 2e-05
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = +1
Query: 46 LNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKV 225
L+GK + P++ + K L K K V++ + E +K FE YG++ +
Sbjct: 110 LDGKKIDPKVAFPKRTQAK-LVTKTK---KVFIGGLSATSTLEDMKQYFETYGKVEDAML 165
Query: 226 MY-KDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKK 369
M+ K RGFGFV F+ + A++ C E++ E + GK + +AQ K
Sbjct: 166 MFDKATQRHRGFGFVTFDSDEVADKVC-EIHFHE-INGKMVECKKAQPK 212
Score = 31.9 bits (69), Expect = 0.35
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSP 591
+++ L E LR F FG + VM + R++GFGF+ F P
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDP 96
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 46.0 bits (104), Expect = 2e-05
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Frame = +1
Query: 172 EMLKDMFEKYGRITSHKVMYKDDGN--SRGFGFVAFEDPDAAERACIELNGKE-LVEGKP 342
E L+D F ++G + VM +D +RGFGF+ F DP + ++ LN +E ++GK
Sbjct: 59 ENLRDYFGRFGEVNECMVM-RDPATKRARGFGFITFVDPSSVDKV---LNNREHELDGK- 113
Query: 343 LYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTI 522
+ K K + K +T+ + V ++ L T E +++ F +G +
Sbjct: 114 ----KIDPKVAFPKRTQAKL-------VTKTKKV--FIGGLSATSTLEDMKQYFETYGKV 160
Query: 523 TSAKVMLEDG--RSKGFGFVCFSS 588
A +M + R +GFGFV F S
Sbjct: 161 EDAMLMFDKATQRHRGFGFVTFDS 184
Score = 46.0 bits (104), Expect = 2e-05
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = +1
Query: 46 LNGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKV 225
L+GK + P++ + K L K K V++ + E +K FE YG++ +
Sbjct: 110 LDGKKIDPKVAFPKRTQAK-LVTKTK---KVFIGGLSATSTLEDMKQYFETYGKVEDAML 165
Query: 226 MY-KDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKK 369
M+ K RGFGFV F+ + A++ C E++ E + GK + +AQ K
Sbjct: 166 MFDKATQRHRGFGFVTFDSDEVADKVC-EIHFHE-INGKMVECKKAQPK 212
Score = 31.9 bits (69), Expect = 0.35
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSSP 591
+++ L E LR F FG + VM + R++GFGF+ F P
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDP 96
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIE 309
+VYV N ++E + + F G + + +++Y ++ G RGF FV F + A+RA +
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 310 LNGKELVEGKPLYVGRAQK 366
LNG G+ L V A K
Sbjct: 67 LNGVAF-NGRNLRVNYANK 84
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 44.4 bits (100), Expect = 6e-05
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGFVAFEDPDAAERACIEL 312
+YV + D ++ L +FEK G+I ++M G SRG+ FV + + + A A
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTY 261
Query: 313 NGKELVEGKPLYV 351
+G E+ GKPL V
Sbjct: 262 DGHEISTGKPLKV 274
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 44.4 bits (100), Expect = 6e-05
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKV-MYKDDGNSRGFGFVAFEDPDAAERACIEL 312
+YV F ED ++++L F +G + + + M + G RGFGFV F+ + A A +
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 313 NGKELVEGKPLYV--GRAQKKAER-QKELKRKFEQLK 414
N EL GK + V R K ER QK + E LK
Sbjct: 73 NESELF-GKTIRVNFARPPKATERSQKPVWADDEWLK 108
Score = 34.7 bits (76), Expect = 0.050
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVML--EDGRSKGFGFVCF 582
LYV + + ++ L F PFG + + + + E G+ +GFGFV F
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEF 59
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 44.0 bits (99), Expect = 8e-05
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVM-YKDDGNSRGFGFVAFEDPDAAERACIE 309
V+++N D +E++K+ K+G+I + YKD G+S+G FV F P A CIE
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASN-CIE 322
Score = 37.1 bits (82), Expect = 0.009
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +1
Query: 373 ERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVML--E 546
E K+ K QLK++ +G ++++NL +E +++E + FG I A + +
Sbjct: 241 EPAKKPKNPKAQLKTDESIT-EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKD 299
Query: 547 DGRSKGFGFVCFSSP 591
G SKG FV FS+P
Sbjct: 300 SGHSKGTAFVHFSTP 314
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 44.0 bits (99), Expect = 8e-05
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIE 309
+VYV N +++ L + F + G +++ +++ ++ G RGF FV F + AA+RA +
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 310 LNGKELVEGKPLYVGRAQKK 369
NG + G+ L V AQ +
Sbjct: 65 FNGVDF-NGRALRVNLAQNR 83
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 312
N++V + +D +D L +F+KY K+ DG+S+G GFV F + + A +E+
Sbjct: 157 NLHVSSVPDDMADAELYRIFDKYQSCRGAKMFRFVDGSSKGSGFVRFGNQTDQQMALVEM 216
Query: 313 NGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKSER 423
+ + V G + + A + ER + R+F+ +++R
Sbjct: 217 H-RTKVGGCRIILKLAGSRGERLDRGESRQFKSQRNDR 253
Score = 33.5 bits (73), Expect = 0.12
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 3/154 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSH--KVMYKDDGNSRGFGFVAFEDPDAAERACIE 309
+++ + D+++E L +F + G +V KD+ +G+ F+ F D A + +
Sbjct: 70 LWIGDVPTDWTEETLSQVFTECGHAPYKVKRVYVKDE--LKGYCFIEFITFDEARQTLYD 127
Query: 310 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 489
LNG + K + ++ NL+V ++ D + D
Sbjct: 128 LNGNRIPGFKDIRFNLC----------------FANDSYNPNSEFNLHVSSVPDDMADAE 171
Query: 490 LRKEFAPFGTITSAKVM-LEDGRSKGFGFVCFSS 588
L + F + + AK+ DG SKG GFV F +
Sbjct: 172 LYRIFDKYQSCRGAKMFRFVDGSSKGSGFVRFGN 205
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
++V F ++ L++ FEK+ + K++ DG S+G+GF+ FE D AE +L
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE-IRKLT 126
Query: 316 GKEL-VEGKPLYVGRAQKK 369
K+L + L +G A +K
Sbjct: 127 PKQLEFRSRKLNLGPAIRK 145
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSS 588
++V + + LR+ F F + K++ DG+SKG+GF+ F +
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFET 115
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
++V F ++ L++ FEK+ + K++ DG S+G+GF+ FE D AE +L
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE-IRKLT 127
Query: 316 GKEL-VEGKPLYVGRAQKK 369
K+L + L +G A +K
Sbjct: 128 PKQLEFRSRKLNLGPAIRK 146
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSS 588
++V + + LR+ F F + K++ DG+SKG+GF+ F +
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFET 116
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 43.2 bits (97), Expect = 1e-04
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 2/153 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 312
++V +++ + +FEKYG + S ++ K S+G FV F A A L
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 313 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 492
+ +++EG ++ K A+ + +RK L++ L ++E L
Sbjct: 117 HNIKVIEG--MHHPVQMKPADTENRNERK----------------LFIGQLSKKHNEENL 158
Query: 493 RKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSS 588
R+ FA FG I V+ + DG+S+G FV F++
Sbjct: 159 REIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTN 191
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 316 GKELVE 333
+ +E
Sbjct: 204 HSQTME 209
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +1
Query: 358 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 537
A + A+ Q++ + + G NL++ +L D L + FAPFG I SAKV
Sbjct: 401 ALQLAQIQQQAAAALPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460
Query: 538 MLE--DGRSKGFGFVCFSS 588
++ +SK FGFV + +
Sbjct: 461 FVDRATNQSKCFGFVSYDN 479
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 309
N+++ + ++F D L MF +G I S KV N S+ FGFV++++ +++ A
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 310 LNGKEL 327
+NG ++
Sbjct: 490 MNGFQI 495
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 142 VKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIELN 315
V N ++ +++ L+D+F K GR+ + K G +GF FV FE D A RA ELN
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +1
Query: 358 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 537
A + A+ Q++ + + G NL++ +L D L + FAPFG I SAKV
Sbjct: 401 ALQLAQIQQQAAAALPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460
Query: 538 MLE--DGRSKGFGFVCFSS 588
++ +SK FGFV + +
Sbjct: 461 FVDRATNQSKCFGFVSYDN 479
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 309
N+++ + ++F D L MF +G I S KV N S+ FGFV++++ +++ A
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 310 LNGKEL 327
+NG ++
Sbjct: 490 MNGFQI 495
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 42.7 bits (96), Expect = 2e-04
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDG--NSRGFGFVAFEDPDAAERACIE 309
+++ D +DE L + F ++G + ++ +D +SRGFGFV F +AE A +
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVD-AIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 310 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDD-E 486
K + GK + RA + + + F + G L + + + + +
Sbjct: 110 RPHK--LGGKTVDSKRAIPREQMSSMIPPPFFETDPA-----PGCKLLLNGITNGVHSVD 162
Query: 487 RLRKEFAPFGTITSAKVMLEDGRSKGFGFVCF 582
LR F FGT+ +++ G+ +G GFV +
Sbjct: 163 SLRVYFETFGTLDQVEIL---GQPRGLGFVIY 191
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +1
Query: 166 SDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL 345
S + L+ FE +G + +++ G RG GFV +ED ++A+R +G+ +V + +
Sbjct: 160 SVDSLRVYFETFGTLDQVEIL----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKI 215
Query: 346 YVGRAQKKAERQKELKRKFEQLKSER 423
V K KR Q S+R
Sbjct: 216 EVRVFTKHPNGSTYWKRPQSQSHSQR 241
Score = 32.7 bits (71), Expect = 0.20
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSS 588
L++ L DE+L F+ +G + A V+ + S+GFGFV F+S
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFAS 99
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 42.7 bits (96), Expect = 2e-04
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDG--NSRGFGFVAFEDPDAAERACIE 309
+++ D +DE L + F ++G + ++ +D +SRGFGFV F +AE A +
Sbjct: 71 LFIGGLSHDTTDEQLGNYFSQWGPVVD-AIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 310 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDD-E 486
K + GK + RA + + + F + G L + + + + +
Sbjct: 130 RPHK--LGGKTVDSKRAIPREQMSSMIPPPFFETDPA-----PGCKLLLNGITNGVHSVD 182
Query: 487 RLRKEFAPFGTITSAKVMLEDGRSKGFGFVCF 582
LR F FGT+ +++ G+ +G GFV +
Sbjct: 183 SLRVYFETFGTLDQVEIL---GQPRGLGFVIY 211
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +1
Query: 166 SDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL 345
S + L+ FE +G + +++ G RG GFV +ED ++A+R +G+ +V + +
Sbjct: 180 SVDSLRVYFETFGTLDQVEIL----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKI 235
Query: 346 YVGRAQKKAERQKELKRKFEQLKSER 423
V K KR Q S+R
Sbjct: 236 EVRVFTKHPNGSTYWKRPQSQSHSQR 261
Score = 32.7 bits (71), Expect = 0.20
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSS 588
L++ L DE+L F+ +G + A V+ + S+GFGFV F+S
Sbjct: 71 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFAS 119
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 42.7 bits (96), Expect = 2e-04
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDG--NSRGFGFVAFEDPDAAERACIE 309
+++ D +DE L + F ++G + ++ +D +SRGFGFV F +AE A +
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVD-AIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 310 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDD-E 486
K + GK + RA + + + F + G L + + + + +
Sbjct: 131 RPHK--LGGKTVDSKRAIPREQMSSMIPPPFFETDPA-----PGCKLLLNGITNGVHSVD 183
Query: 487 RLRKEFAPFGTITSAKVMLEDGRSKGFGFVCF 582
LR F FGT+ +++ G+ +G GFV +
Sbjct: 184 SLRVYFETFGTLDQVEIL---GQPRGLGFVIY 212
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +1
Query: 166 SDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL 345
S + L+ FE +G + +++ G RG GFV +ED ++A+R +G+ +V + +
Sbjct: 181 SVDSLRVYFETFGTLDQVEIL----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKI 236
Query: 346 YVGRAQKKAERQKELKRKFEQLKSER 423
V K KR Q S+R
Sbjct: 237 EVRVFTKHPNGSTYWKRPQSQSHSQR 262
Score = 32.7 bits (71), Expect = 0.20
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG--RSKGFGFVCFSS 588
L++ L DE+L F+ +G + A V+ + S+GFGFV F+S
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFAS 120
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 133 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 309
N+++ + +DF D L + F +G I S KV N S+ FGFV++E+ +A A
Sbjct: 336 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 395
Query: 310 LNGKEL 327
+NG ++
Sbjct: 396 MNGFQI 401
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 439 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSS 588
G NL++ +L D L FAPFG I SAKV ++ SK FGFV + +
Sbjct: 334 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYEN 385
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 40.7 bits (91), Expect = 8e-04
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Frame = +1
Query: 52 GKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY 231
G+M G+ P ++ ++ + + +F V N + SDE ++ + + G + S K +
Sbjct: 25 GQMRMPGQHTPAQQSSQQKPDSSPVF----VGNISDKCSDEFIRKILNECGNVASWKRIK 80
Query: 232 KDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAE--RQKELKRKFE 405
+G +GFGF F D + RA L+ L + K L V +K + R+ ++ +
Sbjct: 81 GSNGKLQGFGFCHFTDLEGTLRALRILHEFHLGD-KKLTVKPDEKVRDDLRKNAIENRKR 139
Query: 406 QLKSERLTRYQGVNLYVKNLDDTIDDERLR 495
Q K E ++ + + DD DE +R
Sbjct: 140 QGKKELKLKHDEL---PADEDDLKKDEEIR 166
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 40.7 bits (91), Expect = 8e-04
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Frame = +1
Query: 52 GKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY 231
G+M G+ P ++ ++ + + +F V N + SDE ++ + + G + S K +
Sbjct: 25 GQMRMPGQHTPAQQSSQQKPDSSPVF----VGNISDKCSDEFIRKILNECGNVASWKRIK 80
Query: 232 KDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAE--RQKELKRKFE 405
+G +GFGF F D + RA L+ L + K L V +K + R+ ++ +
Sbjct: 81 GSNGKLQGFGFCHFTDLEGTLRALRILHEFHLGD-KKLTVKPDEKVRDDLRKNAIENRKR 139
Query: 406 QLKSERLTRYQGVNLYVKNLDDTIDDERLR 495
Q K E ++ + + DD DE +R
Sbjct: 140 QGKKELKLKHDEL---PADEDDLKKDEEIR 166
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
VYV N D ++ ++D+F KYGRI K + G F FV FED AE A +
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRI---KYVDIKSGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 316 GKELVEGKPLYV 351
G E +G+ + V
Sbjct: 68 GYEF-DGRRIRV 78
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
VYV N D ++ ++D+F KYGRI K + G F FV FED AE A +
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRI---KYVDIKSGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 316 GKELVEGKPLYV 351
G E +G+ + V
Sbjct: 68 GYEF-DGRRIRV 78
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITS-HKVMYKDDGNSRGFGFVAFEDPDAAERACI 306
T++ + N + L+ FE+YG I H K S+GFGFV F + AE A
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 307 ELNGKELVEGKPLYVGRAQ 363
+GK LV+G+ L V A+
Sbjct: 79 RTDGK-LVDGRELRVTLAK 96
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITS-HKVMYKDDGNSRGFGFVAFEDPDAAERACI 306
T++ + N + L+ FE+YG I H K S+GFGFV F + AE A
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 307 ELNGKELVEGKPLYVGRAQ 363
+GK LV+G+ L V A+
Sbjct: 79 RTDGK-LVDGRELRVTLAK 96
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +1
Query: 127 FTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACI 306
+ ++V + S+ L+ FE YG+I +++ + G RG+ F+ + D A
Sbjct: 103 YRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYK 162
Query: 307 ELNGKELVEGKPLYV----GRAQK 366
+ +G + V+GK L V GR QK
Sbjct: 163 KADGIK-VDGKRLVVDYERGRTQK 185
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = +1
Query: 142 VKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAF---EDPDAA-ERAC- 303
V N +++ L+D+F ++G I ++Y + GNSRGFGF+ F ED AA ++ C
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCN 139
Query: 304 IELNGKEL 327
+L+G ++
Sbjct: 140 TDLDGHKI 147
Score = 31.5 bits (68), Expect = 0.47
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFS 585
L V NL ++ LR F FG I ++ + G S+GFGF+ F+
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFN 125
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
+Y+ S++ ++ F YG+I V+ K+ GFGFV F+D AE A +LN
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKN-----GFGFVEFDDKRDAEDAVHDLN 57
Query: 316 GKEL 327
GKEL
Sbjct: 58 GKEL 61
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
+Y+ S++ ++ F YG+I V+ K+ GFGFV F+D AE A +LN
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKN-----GFGFVEFDDKRDAEDAVHDLN 57
Query: 316 GKEL 327
GKEL
Sbjct: 58 GKEL 61
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
+Y+ S++ ++ F YG+I V+ K+ GFGFV F+D AE A +LN
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKN-----GFGFVEFDDKRDAEDAVHDLN 57
Query: 316 GKEL 327
GKEL
Sbjct: 58 GKEL 61
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 436 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE-DGRSKGFGFVCFSS 588
Q V+L V +D DE +K F GT+ ++ + DG SKGFGFV SS
Sbjct: 171 QPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSS 222
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 154 GEDF--SDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFV 267
G DF +DE + FE G + ++ K DGNS+GFGFV
Sbjct: 179 GVDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFV 218
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 39.1 bits (87), Expect = 0.002
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 8/135 (5%)
Frame = +1
Query: 55 KMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSH----- 219
K V +G KE +LG+K VYV N ED +DE + K G I
Sbjct: 157 KKVGLGAGEDAKEGWLDLGDKVHA---VYVSNLPEDITDEEFQKFMSKCGVIQPDIRTNK 213
Query: 220 ---KVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKEL 390
K+ +++G +G G + ++ E AC L+G L G+ + V A+ + + +
Sbjct: 214 PKCKLYREENGKLKGDGRCCYIKKESVELACNILDGANL-NGREVKVEEARFEMKGDFDP 272
Query: 391 KRKFEQLKSERLTRY 435
RK +L + + RY
Sbjct: 273 ARKRRKLTAAQKKRY 287
Score = 29.5 bits (63), Expect = 1.9
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 17/93 (18%)
Frame = +1
Query: 355 RAQKKAERQKELKRK-------FEQLKSERLTRYQGVN-LYVKNLDDTIDDERLRKEFAP 510
+AQK+ E +KE KRK E K L V+ +YV NL + I DE +K +
Sbjct: 142 KAQKEDEEKKEKKRKKKVGLGAGEDAKEGWLDLGDKVHAVYVSNLPEDITDEEFQKFMSK 201
Query: 511 FGTI------TSAKVML---EDGRSKGFGFVCF 582
G I K L E+G+ KG G C+
Sbjct: 202 CGVIQPDIRTNKPKCKLYREENGKLKGDGRCCY 234
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +1
Query: 130 TNVYVKNFG----EDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAER 297
T +Y+ N G + +++ L D F +YG I +V+ +G F+ F +AAER
Sbjct: 235 TTLYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVL-----TEKGCAFIEFTTREAAER 289
Query: 298 ACIELNGKELVEGKPLYVGRAQKKAER 378
A K ++GK L + + +A+R
Sbjct: 290 AAERSFNKTFIKGKRLTIRWGEPQAKR 316
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
+++ +++ +K++ +G + + + GNS+G+ F + DP ++A LN
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 316 GKELVEGKPLYVGRAQKKAER 378
G +L + K L V A +R
Sbjct: 353 GMQLGD-KQLVVQLACANQQR 372
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
+++ +++ +K++ +G + + + GNS+G+ F + DP ++A LN
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 316 GKELVEGKPLYVGRAQKKAER 378
G +L + K L V A +R
Sbjct: 353 GMQLGD-KQLVVQLACANQQR 372
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
+++ +++ +K++ +G + + + GNS+G+ F + DP ++A LN
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 327
Query: 316 GKELVEGKPLYVGRAQKKAER 378
G +L + K L V A +R
Sbjct: 328 GMQLGD-KQLVVQLACANQQR 347
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
+++ +++ +K++ +G + + + GNS+G+ F + DP ++A LN
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 330
Query: 316 GKELVEGKPLYVGRAQKKAER 378
G +L + K L V A +R
Sbjct: 331 GMQLGD-KQLVVQLACANQQR 350
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 38.3 bits (85), Expect = 0.004
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
VY+ SD ++ F YG+++ V+ K+ GFGFV F+D A+ A +LN
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSD--VIMKN-----GFGFVDFQDQRDADDAVHDLN 56
Query: 316 GKEL 327
GKEL
Sbjct: 57 GKEL 60
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 312
++V + ++E L F +YG + +V Y + +G SRGF FV F + + A
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA- 89
Query: 313 NGKELVEGKPLYVGRAQKKAERQ 381
++ ++GK + V A+ + ++
Sbjct: 90 -REQTIKGKSVEVKPAKSRENKK 111
Score = 37.1 bits (82), Expect = 0.009
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 115 KAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAA 291
K++ V+V D+S++ L+ FE++G++ + + K R F F+ FE+ ++A
Sbjct: 105 KSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESA 164
Query: 292 ERA 300
++A
Sbjct: 165 DKA 167
Score = 33.9 bits (74), Expect = 0.088
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSS 588
++V + +++E L F +G + A+V + +GRS+GF FV F++
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTT 79
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 312
++V + ++E L F +YG + +V Y + +G SRGF FV F + + A
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA- 89
Query: 313 NGKELVEGKPLYVGRAQKKAERQ 381
++ ++GK + V A+ + ++
Sbjct: 90 -REQTIKGKSVEVKPAKSRENKK 111
Score = 37.1 bits (82), Expect = 0.009
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 115 KAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAA 291
K++ V+V D+S++ L+ FE++G++ + + K R F F+ FE+ ++A
Sbjct: 105 KSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESA 164
Query: 292 ERA 300
++A
Sbjct: 165 DKA 167
Score = 33.9 bits (74), Expect = 0.088
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFGFVCFSS 588
++V + +++E L F +G + A+V + +GRS+GF FV F++
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTT 79
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 37.1 bits (82), Expect = 0.009
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD--DGNSRGFGFVAFEDPDAAERACIE 309
+YV NF E+ +E+L+++F + G + KV+ +D D N++ F V FED + A
Sbjct: 15 IYVANFSEEVDEELLEELFIQAGPVV--KVILRDVRDSNAK-FALVEFEDELSVLFAIEL 71
Query: 310 LNGKEL 327
+NG L
Sbjct: 72 MNGVRL 77
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 36.7 bits (81), Expect = 0.012
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
+Y+KN + E + ++F K+G + +V + +RG FV +ED A+ AC L+
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRV--GNTAETRGTAFVVYEDIFDAKTACEHLS 78
Query: 316 G 318
G
Sbjct: 79 G 79
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 35.9 bits (79), Expect = 0.022
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 439 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE--DGRSKGFG 570
G NL++ +L D L FAPFG I SAKV ++ SK FG
Sbjct: 75 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFG 120
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 35.5 bits (78), Expect = 0.029
Identities = 25/93 (26%), Positives = 46/93 (49%)
Frame = +1
Query: 130 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 309
+NV+V+ D D ++++ +G IT V + G+GFV F+ A++ +E
Sbjct: 96 SNVFVRGISRDMPDT---ELYQAFGGITDGVVQCHV---ADGYGFVLFDTRANAQKKIVE 149
Query: 310 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 408
++GK L GK + V A+ +K + E+
Sbjct: 150 MDGKTL-NGKLISVSWARPDTVGRKRKRPMSEE 181
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 34.3 bits (75), Expect = 0.066
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 193 EKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKK 369
E+ + H V +D G+ +GF +V FE+ A LNG + + L V RAQ++
Sbjct: 34 EELKKFDIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADF-GNRVLKVNRAQQR 91
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 33.9 bits (74), Expect = 0.088
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
VYV D + + L+++F+++GRI V + GF FV ++D AE A L+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP----GFAFVEYDDVRDAEDAVRALD 60
Query: 316 GKEL 327
G +
Sbjct: 61 GSRI 64
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 33.9 bits (74), Expect = 0.088
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
VYV D + + L+++F+++GRI V + GF FV ++D AE A L+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP----GFAFVEYDDVRDAEDAVRALD 60
Query: 316 GKEL 327
G +
Sbjct: 61 GSRI 64
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 33.9 bits (74), Expect = 0.088
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
VYV D + + L+++F+++GRI V + GF FV ++D AE A L+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP----GFAFVEYDDVRDAEDAVRALD 60
Query: 316 GKEL 327
G +
Sbjct: 61 GSRI 64
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITS-HKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 312
+Y+ S+ + +F +YG + + + + KD G S+GF F+ ++D + A
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 313 NGKEL 327
NG L
Sbjct: 100 NGISL 104
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 373 ERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED- 549
ER+ L + KS T +Y+ L + + + F+ +G + + ++ +
Sbjct: 15 ERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKD 74
Query: 550 -GRSKGFGFVCF 582
G+SKGF F+C+
Sbjct: 75 TGKSKGFAFLCY 86
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 145 KNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKE 324
+ + +DF +E+ +M KYG + V + G +V F + AE+A +LN +
Sbjct: 84 QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNR- 142
Query: 325 LVEGKPLY 348
G+P+Y
Sbjct: 143 WFNGQPIY 150
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 32.3 bits (70), Expect = 0.27
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +1
Query: 199 YGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL 345
YG+I + + Y GF FV FED AE AC +L+GK + EG +
Sbjct: 25 YGKINNISMKY-------GFAFVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 32.3 bits (70), Expect = 0.27
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +1
Query: 199 YGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL 345
YG+I + + Y GF FV FED AE AC +L+GK + EG +
Sbjct: 25 YGKINNISMKY-------GFAFVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 32.3 bits (70), Expect = 0.27
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +1
Query: 199 YGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL 345
YG+I + + Y GF FV FED AE AC +L+GK + EG +
Sbjct: 25 YGKINNISMKY-------GFAFVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 31.9 bits (69), Expect = 0.35
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = +1
Query: 124 LFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERAC 303
L +++ N + + L ++F G+IT +G S+G + + P A +A
Sbjct: 186 LCERIFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIEAVQAV 245
Query: 304 IELNGKELVE 333
LNG+ L +
Sbjct: 246 SMLNGQRLFD 255
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 31.5 bits (68), Expect = 0.47
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 136 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRG 255
+++ + ++E L+++F K+G I V+ DG SRG
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRG 183
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 31.5 bits (68), Expect = 0.47
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +1
Query: 292 ERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 408
E A IE +E E + L + A+K+AERQ+E+KRK E+
Sbjct: 945 ELAEIERKRRESEEKERLEI-EAKKEAERQREIKRKLEE 982
>Z49910-7|CAA90124.4| 384|Caenorhabditis elegans Hypothetical
protein F44G4.1 protein.
Length = 384
Score = 31.1 bits (67), Expect = 0.62
Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 1/129 (0%)
Frame = +1
Query: 160 DFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGK 339
+ +DE L+++ EKY + KDD F + A + + K +G+
Sbjct: 66 ELTDEKLQELLEKYEASKATATKTKDD-----FKHLPKSQRGKALKRALR-KDKRARQGE 119
Query: 340 PLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAP-FG 516
+ ++ QKE+ + E ++ T V DD ++ + EFAP F
Sbjct: 120 RAQIRDELGESAPQKEVPKTIESMREYDAT-------MVNEEDDEVEHDEANDEFAPYFN 172
Query: 517 TITSAKVML 543
TS KVM+
Sbjct: 173 RETSPKVMI 181
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 31.1 bits (67), Expect = 0.62
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +1
Query: 73 RFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNS- 249
R PR+ AK V +KN + L+++F YG I + + N
Sbjct: 117 RASPRRSPAARSASPAK---RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHV 173
Query: 250 -RGFGFVAFEDPDAAERACIELNGKELVEGKPLYV 351
RG+G+V +++ + AE++ ++G + ++G ++V
Sbjct: 174 HRGYGYVEYDNLEDAEKSIKHMDGGQ-IDGMAVHV 207
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.7 bits (66), Expect = 0.82
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 448 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 549
LYV NLD T+ ++ + F G++T KV+ ++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein 5
protein.
Length = 447
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 70 GRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNS 249
G F+P +K L + + +N G+ F+ ML +MF Y + K KDD ++
Sbjct: 336 GSFVPANFVDKCLTPDGVFISRLVQQNSGDLFTSIMLGEMFSLYRAREAEKAHKKDDDSA 395
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 250 RGFGFVAFEDPDAAERACIELNG 318
+GFGFV F + +A+ +C LNG
Sbjct: 119 QGFGFVQFNEAGSADESCRSLNG 141
>Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical
protein C03C10.4 protein.
Length = 244
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +1
Query: 283 DAAERACIELNGKELVEGKPLYVGR--AQKKAERQKELKRKFEQLKSERLTRYQGVNLYV 456
+ A R C+E NG + + +P Y + + Q EL E ER Y +
Sbjct: 157 EMALRKCLEENGSAIKKSRPYYERKEVLTRTMNSQLELMSILEHEVQERKDSYSDSMRAL 216
Query: 457 KNLDDTIDDER 489
+ + D I ER
Sbjct: 217 EQISDQIHQER 227
>AF106582-4|AAC78219.1| 456|Caenorhabditis elegans Hypothetical
protein W05F2.6 protein.
Length = 456
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/88 (22%), Positives = 37/88 (42%)
Frame = +1
Query: 76 FIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRG 255
++ ++ EK + KLF D+S E L++ +++ +++Y GN+
Sbjct: 355 YMRTRDAEKHKNSEVKLFVEKL-----PDWSTEQLEEKLRNEFKLSDFQLLYDYKGNNLR 409
Query: 256 FGFVAFEDPDAAERACIELNGKELVEGK 339
V + PDA C + V GK
Sbjct: 410 SAIVLLKYPDAI-NLCNSIRSNPTVFGK 436
>AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical
protein H19M22.3c protein.
Length = 453
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 49 NGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLK 183
+GK + V R I E +KE EK L + + +F E+F E K
Sbjct: 409 SGKSIAVRRLIRHAEHQKERSEKGPLDPDYFDDDFFENFFMEYSK 453
>AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical
protein H19M22.3a protein.
Length = 519
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 49 NGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLK 183
+GK + V R I E +KE EK L + + +F E+F E K
Sbjct: 475 SGKSIAVRRLIRHAEHQKERSEKGPLDPDYFDDDFFENFFMEYSK 519
>AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 394
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 49 NGKMVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLK 183
+GK + V R I E +KE EK L + + +F E+F E K
Sbjct: 350 SGKSIAVRRLIRHAEHQKERSEKGPLDPDYFDDDFFENFFMEYSK 394
>AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical
protein R09A1.1 protein.
Length = 1121
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +1
Query: 160 DFS---DEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 315
DFS DE + + + G+ +H V+Y+D + F FE+ E C++++
Sbjct: 902 DFSKEIDERIGEFIDHTGKRPAHIVVYRDGLSEGDFQKYLFEERVCIEERCLKID 956
>AF016422-6|AAY86271.1| 128|Caenorhabditis elegans Hypothetical
protein R09E12.9 protein.
Length = 128
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 166 SDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDA 288
++ +LK FEKYG++ +V + +G G + +D +A
Sbjct: 9 AEALLKPQFEKYGKLVDDEVWAEVEGYYHPNGVLVHKDKEA 49
>U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical
protein W08A12.4 protein.
Length = 334
Score = 27.9 bits (59), Expect = 5.8
Identities = 24/111 (21%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +1
Query: 85 RKEREKELGEKAKLFTNVYVKN-FGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFG 261
RK RE EL + F N + D + + ++ + ++K+ +K++ R
Sbjct: 86 RKNREDELAIETMKFENSQRNTEVYSPYLDSLKEKSLKQDEQFRNNKIRFKNEEMDRTLK 145
Query: 262 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLK 414
+ ++ R I+ E E K + ++ +RQ+E+ R+FE++K
Sbjct: 146 YQQAQEEHTLRRQKID----EEFEEKCQKLN--EEAQQRQREMNRQFEEIK 190
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 355 RAQKKAERQKEL-KRKFEQLKSERLTR 432
RAQ+KA+ QKEL R+ EQ + E L R
Sbjct: 1257 RAQQKAQTQKELAARQAEQARVEELAR 1283
>Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical
protein F54D1.4 protein.
Length = 536
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 338 LPSTSSLPFNSMQALSAASGSSKATKPK-PLELPSSL 231
+PSTSS P NS S +S ++ PK PLE+ S+
Sbjct: 447 MPSTSSYPANSSPFQSPYRPNSLSSFPKIPLEMTKSI 483
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 329 TSSLPFNSMQALSAASGSSKATKPKPLELPSSLYITL*LVMRPYFSN 189
T++ P ++Q+ SK KP P PS+ YI + YF+N
Sbjct: 61 TNAPPNKAVQSFGQCRHCSKPLKPLPTLTPSNRYIHCDSCNKLYFAN 107
>Z70750-1|CAA94736.2| 362|Caenorhabditis elegans Hypothetical
protein C50F4.1 protein.
Length = 362
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +1
Query: 112 EKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN 246
EK + T+ Y++++ ++ +DE K +GR+T+ + +DGN
Sbjct: 190 EKVGILTH-YLEDWKDEDADEKEKHNVIAHGRLTAEICRFDEDGN 233
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 27.5 bits (58), Expect = 7.6
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +1
Query: 115 KAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDG-NSRGFGFVAFEDPDAA 291
++K+ + V V+ ++ +++ M EK+G + H V DDG + F F D A
Sbjct: 606 QSKMSSVVIVRGVTDELVTDLMAHM-EKFGEVFDHSVKADDDGLITAVFPFRKTGDALKA 664
Query: 292 ERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDD 471
LNG +L + K ER +E+ + +++L NL DD
Sbjct: 665 MADGKVLNGVDL---------EMELKTERIEEIPSTDTNMSADQLLAAIPSNLESDEEDD 715
Query: 472 TIDD 483
++D
Sbjct: 716 LLND 719
>AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear receptor
NHR-7 protein.
Length = 536
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 338 LPSTSSLPFNSMQALSAASGSSKATKPK-PLELPSSL 231
+PSTSS P NS S +S ++ PK PLE+ S+
Sbjct: 447 MPSTSSYPANSSPFQSPYRPNSLSSFPKIPLEMTKSI 483
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 439 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 537
G++L TID E L EF FGT T A++
Sbjct: 81 GIHLRHGITKGTIDSEELISEFLNFGTTTPAQI 113
>AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine
receptor, class t protein8 protein.
Length = 350
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/60 (18%), Positives = 31/60 (51%)
Frame = -3
Query: 321 FAIQFNASSFSSIWVFKSNKTKASRIAIIFVHNFVTCNATIFLKHIF*HFIRKVFSKVLY 142
+ + F +SIW++K+ + + ++ V + + C F+K+++ + S++L+
Sbjct: 219 YHLLFKFGYSTSIWLYKTRRQIIFQALMLCVFHGIVCGIYEFMKYVYFSHTLVILSQLLW 278
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 361 QKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKE 501
Q+ ER+K++ FE+ K E+L R + L+ KN + E+ +E
Sbjct: 256 QQNQEREKQINDDFEKRKLEKLQREK---LFEKNKQAKLQREKAHQE 299
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.137 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,148,703
Number of Sequences: 27780
Number of extensions: 236245
Number of successful extensions: 1213
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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