Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0876
         (425 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   1.2  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   3.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   5.0  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   5.0  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   6.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.6  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 219 QATQSSNRIRQWNEANHLDRI 281
           + T   NR+ QW E   L R+
Sbjct: 80  EGTNRKNRVLQWREPEELRRL 100


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 253 GMRPTIWTEFVKRFNIKRVVEFYGATEGNANI 348
           GM+ T   E  +R +I  V EF   +E  ANI
Sbjct: 238 GMQTTNEKEIFERLSILPVDEFLQISEEVANI 269


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 423 NRYRVNCGDDSRYKSYCTCLVV 358
           N YR +C D S    YC  L +
Sbjct: 283 NVYRYSCRDCSYATKYCHSLKI 304


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 423 NRYRVNCGDDSRYKSYCTCLVV 358
           N YR +C D S    YC  L +
Sbjct: 41  NVYRYSCRDCSYATKYCHSLKI 62


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 133 PGNMQTPKISLS 98
           PGN  TP I LS
Sbjct: 128 PGNQSTPGIKLS 139


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 294 EAFDEFCPDGWPHSIAVYGSNF 229
           E  + F P GW  +IAV  S F
Sbjct: 321 ELSEIFKPRGWVLTIAVPASRF 342


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,343
Number of Sequences: 336
Number of extensions: 2302
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)