Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0876
(425 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33495| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 1e-26
SB_48304| Best HMM Match : AMP-binding (HMM E-Value=0) 32 0.17
SB_49687| Best HMM Match : AMP-binding (HMM E-Value=7.6e-08) 30 0.70
SB_4923| Best HMM Match : 7tm_1 (HMM E-Value=0.12) 30 0.92
SB_12749| Best HMM Match : DUF1705 (HMM E-Value=9.6) 28 3.7
SB_53891| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_2184| Best HMM Match : AMP-binding (HMM E-Value=8.5e-06) 27 6.5
SB_26631| Best HMM Match : ig (HMM E-Value=1.6e-22) 27 6.5
SB_45279| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_33855| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_2946| Best HMM Match : ig (HMM E-Value=6.1e-05) 27 8.6
>SB_33495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 72.9 bits (171), Expect(2) = 1e-26
Identities = 28/50 (56%), Positives = 39/50 (78%)
Frame = +1
Query: 274 TEFVKRFNIKRVVEFYGATEGNANIVNIDNKTGAIGFVSRIIPAVYPIAI 423
T F FNI ++ EFY +TEGNAN++NIDN+ GA+GF SRI+P+ YP+ +
Sbjct: 335 TNFSPGFNITKIGEFYASTEGNANVINIDNQVGAVGFTSRIVPSAYPVKV 384
Score = 63.7 bits (148), Expect(2) = 1e-26
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +1
Query: 7 DIMYCPMPLYHSAGGCISVGQAFIFGCTVALRAKFSVSAYFPDCIKFKAT 156
D++YCP+PLYHSA G ++VG + G T+ LR KFS S ++ +CI+ T
Sbjct: 286 DVVYCPLPLYHSAAGILAVGYCIVHGSTLVLRKKFSASRFWDECIEHNVT 335
>SB_48304| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 374
Score = 32.3 bits (70), Expect = 0.17
Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 8/134 (5%)
Frame = +1
Query: 25 MPLYHSAGGCISVGQAFIFGCTVALRAKFSVSAYFPDCIKFKATAAHYIGEMCRYILATP 204
MPL+H+ G I++G F G V L F K+K T + + ++ P
Sbjct: 184 MPLFHAFGLVINIGMHFYLGSKVVLLQGFEPEQLLKTIEKYKVTDFPMVPPLALFLAKHP 243
Query: 205 ------PSATDRQHKVRTVYGNGMRPTIWTEFVKRFNIKRVVEFYGATE--GNANIVNID 360
S+ + G G+ T+ E + ++K V + YG TE A I +D
Sbjct: 244 LVDKYDLSSLESMVSAAAPVGKGVLRTM-AERIP--SLKIVRQGYGLTECTAGAIITPVD 300
Query: 361 NKTGAIGFVSRIIP 402
G V ++P
Sbjct: 301 PNKSKDGSVGVLLP 314
>SB_49687| Best HMM Match : AMP-binding (HMM E-Value=7.6e-08)
Length = 224
Score = 30.3 bits (65), Expect = 0.70
Identities = 34/134 (25%), Positives = 54/134 (40%), Gaps = 8/134 (5%)
Frame = +1
Query: 25 MPLYHSAGGCISVGQAFIFGCTVALRAKFSVSAYFPDCIKFKATAAHYIGEMCRYILATP 204
+PL+H+ G ++VG F G V L F K+K + + ++ P
Sbjct: 13 LPLFHAFGLAVNVGMHFYLGSKVILLQGFEPEQLLKTIEKYKVNDFPMVPPLALFLAKHP 72
Query: 205 ------PSATDRQHKVRTVYGNGMRPTIWTEFVKRFNIKRVVEFYGATEGNAN-IVN-ID 360
S+ + G G+ T+ E + ++K V + YG TE A IVN ID
Sbjct: 73 LVDKYDLSSLESMISAAAPVGKGILRTM-AERIP--SLKIVRQGYGLTEATAGAIVNPID 129
Query: 361 NKTGAIGFVSRIIP 402
G V ++P
Sbjct: 130 PTKCKDGSVGVLLP 143
>SB_4923| Best HMM Match : 7tm_1 (HMM E-Value=0.12)
Length = 595
Score = 29.9 bits (64), Expect = 0.92
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -1
Query: 368 VLLSMFTIFALPSVAP*NSTTRLMLKRLTNSVQMVGLIPLPYTVRT 231
+L ++ + AL V P S LML L + M GLI P V T
Sbjct: 326 ILFNLLVVIALVKVRPLRSRANLMLGCLAVTDLMTGLIAQPLAVNT 371
>SB_12749| Best HMM Match : DUF1705 (HMM E-Value=9.6)
Length = 134
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 386 TNPIAPVLLSMFTIFALPSVAP*NSTTRLMLKRLTNSVQMVGLIPLPYTV 237
T+P ++ ++ I AL V P S LML L + M GLI P V
Sbjct: 37 TSPFT-IIFNLLVIIALVKVRPLRSRANLMLGCLAVTDLMTGLIVQPLAV 85
>SB_53891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 325 ATEGNANIVNIDNKTGAIGFVS 390
ATEG +V+I+ + GA+GF+S
Sbjct: 158 ATEGEIVVVSINYRLGALGFLS 179
>SB_2184| Best HMM Match : AMP-binding (HMM E-Value=8.5e-06)
Length = 757
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 25 MPLYHSAGGCISVGQAFIFGCTVALRAKFSVSAYFPDCIKFK 150
+PL+H+ G ++VG F G V L F K+K
Sbjct: 648 LPLFHAFGLAVNVGMHFYLGSKVILLQGFEPEQLLKTIEKYK 689
>SB_26631| Best HMM Match : ig (HMM E-Value=1.6e-22)
Length = 1123
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 94 LQCTRI*RPDQLKYTLQLNDTKALDSTL 11
L C+ + PD + YTL NDT AL S +
Sbjct: 126 LNCSALANPDNINYTLYRNDT-ALASNM 152
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 94 LQCTRI*RPDQLKYTLQLNDTKALDSTL 11
L C+ + PD + YTL NDT AL S +
Sbjct: 212 LNCSALANPDNINYTLYRNDT-ALASNM 238
>SB_45279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 26.6 bits (56), Expect = 8.6
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 181 CRYILATPPSATDRQHKVRTVYGNGMRPTIWTEFVKRFNIKRVVEFYGATEGNAN--IVN 354
C YI A PPS + ++++R G G +R I + YG GNA+ I+N
Sbjct: 51 CLYIFAKPPSLEELENRLR---GRGTETD--DTLRQRLEIAKSELAYGEEPGNADYTIIN 105
Query: 355 ID 360
D
Sbjct: 106 DD 107
>SB_33855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 94 LQCTRI*RPDQLKYTLQLNDTK 29
L C+ + +PD + YTL N TK
Sbjct: 117 LNCSAVGKPDNITYTLYRNGTK 138
>SB_2946| Best HMM Match : ig (HMM E-Value=6.1e-05)
Length = 200
Score = 26.6 bits (56), Expect = 8.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 94 LQCTRI*RPDQLKYTLQLNDTK 29
L C+ + +PD + YTL N TK
Sbjct: 136 LNCSAVGKPDNITYTLYRNGTK 157
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,292,588
Number of Sequences: 59808
Number of extensions: 306524
Number of successful extensions: 815
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 814166562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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