Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0875
(434 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101466-1|AAI01467.1| 1849|Homo sapiens SET binding factor 2 pr... 33 0.32
AY234241-1|AAO62733.1| 1849|Homo sapiens SET binding factor 2 pr... 33 0.56
AB209093-1|BAD92330.1| 1455|Homo sapiens mitogen-activated prote... 33 0.56
BC048800-1|AAH48800.1| 435|Homo sapiens chromosome 10 open read... 29 6.9
BC029134-1|AAH29134.2| 253|Homo sapiens C10orf47 protein protein. 29 6.9
AL138898-9|CAH73463.1| 239|Homo sapiens chromosome 10 open read... 29 6.9
AL138898-7|CAH73461.1| 435|Homo sapiens chromosome 10 open read... 29 6.9
BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif prote... 29 9.1
AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific heterog... 29 9.1
AF069682-1|AAC24858.2| 392|Homo sapiens testes specific heterog... 29 9.1
>BC101466-1|AAI01467.1| 1849|Homo sapiens SET binding factor 2
protein.
Length = 1849
Score = 33.5 bits (73), Expect = 0.32
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Frame = -3
Query: 336 AARESQLPVRIAACSRFNHLPVLCALKVSAFTL---EG---GDGIVVVFLRHNDGDDAP 178
A ++S LP R+A C R N LPV+C + TL G G G+V +F N + AP
Sbjct: 1162 AVQDSSLP-RVARCYRHNRLPVVCWKNSRSGTLLLRSGGFHGKGVVGLFKSQNSPEAAP 1219
>AY234241-1|AAO62733.1| 1849|Homo sapiens SET binding factor 2
protein.
Length = 1849
Score = 32.7 bits (71), Expect = 0.56
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = -3
Query: 336 AARESQLPVRIAACSRFNHLPVLCALKVSAFTL---EG---GDGIVVVFLRHNDGDDAP 178
A ++S LP R+A C R N LPV+C + TL G G G+V +F N AP
Sbjct: 1162 AVQDSSLP-RVARCYRHNRLPVVCWKNSRSGTLLLRSGGFHGKGVVGLFKSQNSPQAAP 1219
>AB209093-1|BAD92330.1| 1455|Homo sapiens mitogen-activated protein
kinase kinase kinase 5 variant protein.
Length = 1455
Score = 32.7 bits (71), Expect = 0.56
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = -3
Query: 432 EARRRAPPQHGHGVPPRSRAPAQPRHVLAEGGAARESQLPVRIAACS 292
EA RR+ P G GVP RAP + R E GAAR+ R A S
Sbjct: 11 EAPRRSEPPPGSGVPSGERAPERRRRRGGE-GAARDGSCLARRARSS 56
>BC048800-1|AAH48800.1| 435|Homo sapiens chromosome 10 open reading
frame 47 protein.
Length = 435
Score = 29.1 bits (62), Expect = 6.9
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 423 RRAPPQHGHGVPPRSRAPAQPRHVLAEGGAARESQLPVRIAACS 292
R P G P + +AP P +++ GAARE + + AA S
Sbjct: 234 RSGDPGPGPSHPAQPKAPRFPSNIIVTNGAAREPRRTLSRAAVS 277
>BC029134-1|AAH29134.2| 253|Homo sapiens C10orf47 protein protein.
Length = 253
Score = 29.1 bits (62), Expect = 6.9
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 423 RRAPPQHGHGVPPRSRAPAQPRHVLAEGGAARESQLPVRIAACS 292
R P G P + +AP P +++ GAARE + + AA S
Sbjct: 52 RSGDPGPGPSHPAQPKAPRFPSNIIVTNGAAREPRRTLSRAAVS 95
>AL138898-9|CAH73463.1| 239|Homo sapiens chromosome 10 open reading
frame 47 protein.
Length = 239
Score = 29.1 bits (62), Expect = 6.9
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 423 RRAPPQHGHGVPPRSRAPAQPRHVLAEGGAARESQLPVRIAACS 292
R P G P + +AP P +++ GAARE + + AA S
Sbjct: 38 RSGDPGPGPSHPAQPKAPRFPSNIIVTNGAAREPRRTLSRAAVS 81
>AL138898-7|CAH73461.1| 435|Homo sapiens chromosome 10 open reading
frame 47 protein.
Length = 435
Score = 29.1 bits (62), Expect = 6.9
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 423 RRAPPQHGHGVPPRSRAPAQPRHVLAEGGAARESQLPVRIAACS 292
R P G P + +AP P +++ GAARE + + AA S
Sbjct: 234 RSGDPGPGPSHPAQPKAPRFPSNIIVTNGAAREPRRTLSRAAVS 277
>BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif protein,
X-linked-like 2 protein.
Length = 392
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -3
Query: 423 RRAPPQHGHGVPPRSRAPAQPRHVLAEGGAARESQLPVR 307
+R PP G PP+ AP+ P + GG R L VR
Sbjct: 149 KRGPPPRRVGPPPKRAAPSGPAR--SSGGGMRGRALAVR 185
>AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 386
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -3
Query: 423 RRAPPQHGHGVPPRSRAPAQPRHVLAEGGAARESQLPVR 307
+R PP G PP+ AP+ P + GG R L VR
Sbjct: 143 KRGPPPRRVGPPPKRAAPSGPAR--SSGGGMRGRALAVR 179
>AF069682-1|AAC24858.2| 392|Homo sapiens testes specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 392
Score = 28.7 bits (61), Expect = 9.1
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -3
Query: 423 RRAPPQHGHGVPPRSRAPAQPRHVLAEGGAARESQLPVR 307
+R PP G PP+ AP+ P + GG R L VR
Sbjct: 149 KRGPPPRRVGPPPKRAAPSGPAR--SSGGGMRGRALAVR 185
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,559,375
Number of Sequences: 237096
Number of extensions: 1300917
Number of successful extensions: 4731
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4717
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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